DTP3_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.0709281
NAMPT nicotinamide phosphoribosyltransferase 0.0699643
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0699593
SMAD3 SMAD family member 3 0.0681399
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0619212
CXCL8 chemokine (C-X-C motif) ligand 8 0.0563668
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0555313
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.053887
PELO pelota homolog (Drosophila) 0.0470139
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0459946
SMOX spermine oxidase 0.0429963
NAP1L1 nucleosome assembly protein 1-like 1 0.0421992
PRRC2C proline-rich coiled-coil 2C 0.0413
AHR aryl hydrocarbon receptor 0.0408477
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0404347
TRIO trio Rho guanine nucleotide exchange factor 0.0404248
FAT1 FAT atypical cadherin 1 0.0373524
RPS12 ribosomal protein S12 0.0370096
OGA O-GlcNAcase 0.0356704
FNDC3B fibronectin type III domain containing 3B 0.0342593
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0340628
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0337237
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.032841
SQSTM1 sequestosome 1 0.03264
EEF2 eukaryotic translation elongation factor 2 0.0321436
TNIP1 TNFAIP3 interacting protein 1 0.0319003
SHB Src homology 2 domain containing adaptor protein B 0.0316118
CAB39 calcium binding protein 39 0.0313127
NRIP1 nuclear receptor interacting protein 1 0.0308772
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0302887
TPR translocated promoter region, nuclear basket protein 0.0300795
APP amyloid beta (A4) precursor protein 0.0299661
SOD2 superoxide dismutase 2, mitochondrial 0.029668
SRRM2 serine/arginine repetitive matrix 2 0.029255
RNF145 ring finger protein 145 0.0287028
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.028657
HIPK2 homeodomain interacting protein kinase 2 0.028632
ADD3 adducin 3 (gamma) 0.0285296
NEK7 NIMA-related kinase 7 0.0285177
VEGFA vascular endothelial growth factor A 0.0284849
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0282971
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0275728
MT2A metallothionein 2A 0.0269102
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0268425
RUNX2 runt-related transcription factor 2 0.02673
APLP2 amyloid beta (A4) precursor-like protein 2 0.0262753
HELZ helicase with zinc finger 0.0259314
RBM39 RNA binding motif protein 39 0.0256534
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0252727
RPL37A ribosomal protein L37a 0.0251242
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0250005
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0247232
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0246982
ANKRD11 ankyrin repeat domain 11 0.024537
ETNK1 ethanolamine kinase 1 0.0242715
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0241741
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0236534
FNBP1 formin binding protein 1 0.0233033
DST dystonin 0.0232924
RPL31 ribosomal protein L31 0.0231857
AFDN afadin, adherens junction formation factor 0.0230642
RPS3 ribosomal protein S3 0.0229482
YBX3 Y box binding protein 3 0.022782
TENT2 terminal nucleotidyltransferase 2 0.0227485
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0224732
NUMA1 nuclear mitotic apparatus protein 1 0.0224248
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0224159
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0224008
RANBP2 RAN binding protein 2 0.0223879
PLEC plectin 0.0222364
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0217715
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.0217575
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.021631
FBXO32 F-box protein 32 0.0216028
RBM33 RNA binding motif protein 33 0.021425
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0211922
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0211006
DOCK5 dedicator of cytokinesis 5 0.0206566
TPM3 tropomyosin 3 0.020499
CD109 CD109 molecule 0.0204953
RB1CC1 RB1-inducible coiled-coil 1 0.0202824
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0201778
RAD21 RAD21 homolog (S. pombe) 0.0197495
MARCHF6 membrane associated ring-CH-type finger 6 0.0193889
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0193869
CREBRF CREB3 regulatory factor 0.0192151
GIGYF2 GRB10 interacting GYF protein 2 0.0191245
EWSR1 EWS RNA-binding protein 1 0.0189576
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0188384
WAC WW domain containing adaptor with coiled-coil 0.018723
KDM3A lysine (K)-specific demethylase 3A 0.0186563
YTHDC1 YTH domain containing 1 0.0186467
NUP58 nucleoporin 58 0.0185193
ZC3H11A zinc finger CCCH-type containing 11A 0.0184486
SEPTIN9 septin 9 0.0182039
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0181404
RAB8B RAB8B, member RAS oncogene family 0.0181303
PNISR PNN-interacting serine/arginine-rich protein 0.0181181
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0181064
ARGLU1 arginine and glutamate rich 1 0.0180736

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.428962
FN1 fibronectin 1 -0.268775
NRG1 neuregulin 1 -0.188192
PTMA prothymosin, alpha -0.133466
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0955656
TMSB10 thymosin beta 10 -0.0953774
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.093914
HMGA2 high mobility group AT-hook 2 -0.0896697
S100A6 S100 calcium binding protein A6 -0.0876058
IFI27 interferon, alpha-inducible protein 27 -0.083596
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0806345
FTL ferritin, light polypeptide -0.0658057
VCL vinculin -0.0625916
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0608158
PLIN2 perilipin 2 -0.0535333
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0532425
S100A10 S100 calcium binding protein A10 -0.050692
VIM vimentin -0.0493646
HLA-B major histocompatibility complex, class I, B -0.0472458
LIMCH1 LIM and calponin homology domains 1 -0.0469624
MAP1B microtubule-associated protein 1B -0.0455861
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0443581
SYT1 synaptotagmin I -0.0436057
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.042543
FTH1 ferritin, heavy polypeptide 1 -0.0415164
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0406051
SOX4 SRY (sex determining region Y)-box 4 -0.0393762
MRPS6 mitochondrial ribosomal protein S6 -0.0382295
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0375445
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0371809
S100A9 S100 calcium binding protein A9 -0.0366194
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0362923
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0350547
PALLD palladin, cytoskeletal associated protein -0.0347024
TPT1 tumor protein, translationally-controlled 1 -0.0343969
TM4SF1 transmembrane 4 L six family member 1 -0.0342587
ASPH aspartate beta-hydroxylase -0.0340671
EGR1 early growth response 1 -0.0339119
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0333224
LY6E lymphocyte antigen 6 complex, locus E -0.0332055
LMNA lamin A/C -0.0326664
SFRP1 secreted frizzled-related protein 1 -0.0324662
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0322505
ENO2 enolase 2 (gamma, neuronal) -0.0317909
RAI14 retinoic acid induced 14 -0.0316227
ACTG1 actin gamma 1 -0.0307433
LOC102724023 ES1 protein homolog, mitochondrial -0.0303785
HILPDA hypoxia inducible lipid droplet-associated -0.0299353
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0297967
TMSB4X thymosin beta 4, X-linked -0.0293886
CANX calnexin -0.0293733
GNAS GNAS complex locus -0.0292637
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0292053
TMEM165 transmembrane protein 165 -0.0291895
RPS21 ribosomal protein S21 -0.0289853
IGFBP5 insulin-like growth factor binding protein 5 -0.0287871
CTSD cathepsin D -0.0287384
IGFBP3 insulin-like growth factor binding protein 3 -0.028367
RASAL2 RAS protein activator like 2 -0.0280975
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.027054
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0266457
IFI6 interferon, alpha-inducible protein 6 -0.026536
TENM4 teneurin transmembrane protein 4 -0.0264049
SLC35F3 solute carrier family 35, member F3 -0.0261964
TMEM263 transmembrane protein 263 -0.025951
PDIA3 protein disulfide isomerase family A, member 3 -0.0258035
TFPI2 tissue factor pathway inhibitor 2 -0.025797
IER3 immediate early response 3 -0.0257835
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.025348
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.024735
LOX lysyl oxidase -0.0246221
TPM4 tropomyosin 4 -0.0244769
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0241822
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0239309
H1-0 H1.0 linker histone -0.0234714
BLZF1 basic leucine zipper nuclear factor 1 -0.0233626
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.02295
IFI16 interferon, gamma-inducible protein 16 -0.022943
MCL1 myeloid cell leukemia 1 -0.0227684
ENO1 enolase 1, (alpha) -0.0226841
ZMYND8 zinc finger, MYND-type containing 8 -0.0226385
NDRG1 N-myc downstream regulated 1 -0.0216471
OXR1 oxidation resistance 1 -0.0216169
RPS24 ribosomal protein S24 -0.021414
KRT81 keratin 81, type II -0.0211382
POTEF POTE ankyrin domain family, member F -0.0204673
PRKCA protein kinase C, alpha -0.0204554
HMGA1 high mobility group AT-hook 1 -0.0201164
GPC6 glypican 6 -0.0200361
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0200348
SOX5 SRY (sex determining region Y)-box 5 -0.020005
TGFA transforming growth factor, alpha -0.019803
PRH1 proline-rich protein HaeIII subfamily 1 -0.0196961
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0196068
IFITM1 interferon induced transmembrane protein 1 -0.0192998
PFN1 profilin 1 -0.0192644
HSPB1 heat shock 27kDa protein 1 -0.0189746
SPDYA speedy/RINGO cell cycle regulator family member A -0.0189739
TUBA1B tubulin, alpha 1b -0.0188316
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0187964