Dabrafenib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.496707
AKAP12 A kinase (PRKA) anchor protein 12 0.310236
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.160394
TIMP1 TIMP metallopeptidase inhibitor 1 0.0952518
IGFBP1 insulin-like growth factor binding protein 1 0.0928859
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0732344
SVIL supervillin 0.0720387
DSPP dentin sialophosphoprotein 0.0703944
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0679033
MT2A metallothionein 2A 0.0605925
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0572851
TF transferrin 0.053984
AHSG alpha-2-HS-glycoprotein 0.053267
APLP2 amyloid beta (A4) precursor-like protein 2 0.0517942
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.04984
FAM107B family with sequence similarity 107, member B 0.048137
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0441486
FOXP1 forkhead box P1 0.0432389
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0429072
RPS12 ribosomal protein S12 0.042433
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0416134
CCL20 chemokine (C-C motif) ligand 20 0.0393676
DLC1 DLC1 Rho GTPase activating protein 0.0393372
FAT1 FAT atypical cadherin 1 0.0387551
RPS8 ribosomal protein S8 0.0370879
C3 complement component 3 0.0367712
HMGA1 high mobility group AT-hook 1 0.036326
MCL1 myeloid cell leukemia 1 0.0362508
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0355632
RPL19 ribosomal protein L19 0.0345864
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0333089
RPL7 ribosomal protein L7 0.0332382
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0330868
MYH9 myosin, heavy chain 9, non-muscle 0.0325389
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.032191
GRB10 growth factor receptor-bound protein 10 0.0321308
RPL11 ribosomal protein L11 0.0314799
RPL37A ribosomal protein L37a 0.0313177
PAWR PRKC, apoptosis, WT1, regulator 0.0298173
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0286645
BCL2L1 BCL2-like 1 0.0272945
CTSB cathepsin B 0.0270299
EEF2 eukaryotic translation elongation factor 2 0.025847
EIF1 eukaryotic translation initiation factor 1 0.0245806
ERRFI1 ERBB receptor feedback inhibitor 1 0.0244179
KRT18 keratin 18, type I 0.0235927
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.022953
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0228726
TPM4 tropomyosin 4 0.0225557
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0224566
EXT1 exostosin glycosyltransferase 1 0.0224431
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 0.0212894
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0212424
RPS17 ribosomal protein S17 0.0211109
TMSB10 thymosin beta 10 0.0210148
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0207891
DSTN destrin (actin depolymerizing factor) 0.0207398
RPS6 ribosomal protein S6 0.0206114
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0204189
KYNU kynureninase 0.0203492
SLC38A2 solute carrier family 38, member 2 0.02001
MACF1 microtubule-actin crosslinking factor 1 0.0199481
SEPTIN9 septin 9 0.0198963
CPE carboxypeptidase E 0.0198842
DUSP6 dual specificity phosphatase 6 0.0198495
RPL26 ribosomal protein L26 0.019715
EEF1G eukaryotic translation elongation factor 1 gamma 0.0193228
RPS3 ribosomal protein S3 0.0191934
RPL5 ribosomal protein L5 0.0187188
FN1 fibronectin 1 0.0187123
NACA nascent polypeptide-associated complex alpha subunit 0.0185225
RPL31 ribosomal protein L31 0.0183143
KLF6 Kruppel-like factor 6 0.0181586
RAI14 retinoic acid induced 14 0.018108
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0180204
TPT1 tumor protein, translationally-controlled 1 0.0178766
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0178266
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0178019
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0170947
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0169562
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0167357
IGFBP3 insulin-like growth factor binding protein 3 0.0166716
NSUN6 NOP2/Sun domain family, member 6 0.016666
RPLP0 ribosomal protein, large, P0 0.016612
NHSL1 NHS-like 1 0.0165116
ACTN4 actinin, alpha 4 0.0160687
RPS25 ribosomal protein S25 0.0160103
PLEC plectin 0.0159869
AFF1 AF4/FMR2 family, member 1 0.0159866
RACK1 receptor for activated C kinase 1 0.0158688
GCLC glutamate-cysteine ligase, catalytic subunit 0.0156639
ASPH aspartate beta-hydroxylase 0.0156388
MBNL2 muscleblind-like splicing regulator 2 0.0155568
ITGA6 integrin, alpha 6 0.0155436
FERMT1 fermitin family member 1 0.0152686
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0151871
ARL5B ADP-ribosylation factor-like 5B 0.0151342
RPL3 ribosomal protein L3 0.0150985
HSPA1A heat shock 70kDa protein 1A 0.0150601
PEG3 paternally expressed 3 0.0149774

decreased expression

Symbol Name Standardized Value
APOB apolipoprotein B -0.0752123
LRMDA leucine rich melanocyte differentiation associated -0.0658745
GPC6 glypican 6 -0.0556409
FNDC3B fibronectin type III domain containing 3B -0.0479017
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.045024
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0354432
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.033374
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0331428
ELL2 elongation factor, RNA polymerase II, 2 -0.0310963
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0296681
FBF1 Fas (TNFRSF6) binding factor 1 -0.0288169
MAML2 mastermind-like 2 (Drosophila) -0.0274803
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0266057
NPAS2 neuronal PAS domain protein 2 -0.025901
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0256628
PRELID2 PRELI domain containing 2 -0.0213881
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0211394
TMEM123 transmembrane protein 123 -0.0210674
MBNL3 muscleblind-like splicing regulator 3 -0.0209635
RBM39 RNA binding motif protein 39 -0.0206831
ZBTB20 zinc finger and BTB domain containing 20 -0.0194808
H1-0 H1.0 linker histone -0.0193705
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0192891
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0189026
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0187952
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0186767
AHNAK AHNAK nucleoprotein -0.0185102
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0183525
PTPRM protein tyrosine phosphatase, receptor type, M -0.0182447
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0182228
VCL vinculin -0.018095
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 -0.0175689
SOX5 SRY (sex determining region Y)-box 5 -0.017074
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.016997
PTCHD4 patched domain containing 4 -0.0168818
EML4 echinoderm microtubule associated protein like 4 -0.0166214
AUH AU RNA binding protein/enoyl-CoA hydratase -0.0165186
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0151586
TTC28 tetratricopeptide repeat domain 28 -0.0150447
OSMR oncostatin M receptor -0.0149594
ZMYND8 zinc finger, MYND-type containing 8 -0.0148762
MALT1 MALT1 paracaspase -0.0147905
UGP2 UDP-glucose pyrophosphorylase 2 -0.0147026
ATP10A ATPase, class V, type 10A -0.0142882
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0142484
SDC4 syndecan 4 -0.014187
ZNF638 zinc finger protein 638 -0.0136506
ZNF292 zinc finger protein 292 -0.0136384
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0136014
SOS1 son of sevenless homolog 1 (Drosophila) -0.0135907
SAMD4A sterile alpha motif domain containing 4A -0.0134097
NCOA7 nuclear receptor coactivator 7 -0.0132079
ARFGEF3 ARFGEF family member 3 -0.0131445
PTPRK protein tyrosine phosphatase, receptor type, K -0.0130785
TRIM26 tripartite motif containing 26 -0.0130309
ITGA1 integrin, alpha 1 -0.0127981
PHF21A PHD finger protein 21A -0.0127952
KDM7A lysine (K)-specific demethylase 7A -0.0123706
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 -0.0123626
FOXN3 forkhead box N3 -0.012304
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0121918
NFIA nuclear factor I/A -0.0121744
A2M alpha-2-macroglobulin -0.0121623
ARHGAP12 Rho GTPase activating protein 12 -0.0121607
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0120844
CDK19 cyclin-dependent kinase 19 -0.0120826
KDM3A lysine (K)-specific demethylase 3A -0.0120161
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0119639
AFDN afadin, adherens junction formation factor -0.0119144
PDGFB platelet-derived growth factor beta polypeptide -0.0119047
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 -0.011818
TAS2R14 taste receptor, type 2, member 14 -0.0116915
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0115008
ADGRG6 adhesion G protein-coupled receptor G6 -0.0113588
DST dystonin -0.0112768
RUNX1 runt-related transcription factor 1 -0.0110195
MTUS1 microtubule associated tumor suppressor 1 -0.0110099
MBD5 methyl-CpG binding domain protein 5 -0.0110047
RIGI RNA sensor RIG-I -0.0109486
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0108507
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0108447
WSB1 WD repeat and SOCS box containing 1 -0.010648
RBM25 RNA binding motif protein 25 -0.0105041
TNS3 tensin 3 -0.0103772
TMEM51 transmembrane protein 51 -0.0102413
RPS27A ribosomal protein S27a -0.0101647
MSI2 musashi RNA-binding protein 2 -0.0101178
TBCK TBC1 domain containing kinase -0.0101132
MALRD1 MAM and LDL receptor class A domain containing 1 -0.0100869
FUS FUS RNA binding protein -0.0100132
SELENOP selenoprotein P -0.00998691
DSCAM Down syndrome cell adhesion molecule -0.00997853
HELZ helicase with zinc finger -0.00994882
CAMTA1 calmodulin binding transcription activator 1 -0.00990805
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.00986834
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0098485
VMP1 vacuole membrane protein 1 -0.00977032
DOCK4 dedicator of cytokinesis 4 -0.00972823
ZSWIM5 zinc finger, SWIM-type containing 5 -0.00969149
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.00968145