Dabrafenib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.191334
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.093509
MACF1 microtubule-actin crosslinking factor 1 0.0742387
PSD3 pleckstrin and Sec7 domain containing 3 0.0643855
ERRFI1 ERBB receptor feedback inhibitor 1 0.0623897
RPL19 ribosomal protein L19 0.0615206
MT2A metallothionein 2A 0.0612983
PYGL phosphorylase, glycogen, liver 0.057825
CAPRIN2 caprin family member 2 0.050248
WWTR1 WW domain containing transcription regulator 1 0.0404518
KRT18 keratin 18, type I 0.0380173
ZSWIM6 zinc finger, SWIM-type containing 6 0.0377694
EEF1G eukaryotic translation elongation factor 1 gamma 0.0374753
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0372201
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0371872
HSPA8 heat shock 70kDa protein 8 0.0370344
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0364879
MYH9 myosin, heavy chain 9, non-muscle 0.035709
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0355337
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0340521
ZBTB38 zinc finger and BTB domain containing 38 0.0329475
APLP2 amyloid beta (A4) precursor-like protein 2 0.0315466
HOMER1 homer scaffolding protein 1 0.030625
RPS12 ribosomal protein S12 0.03057
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0305538
EEF2 eukaryotic translation elongation factor 2 0.0302165
BIRC3 baculoviral IAP repeat containing 3 0.0282066
LOXL2 lysyl oxidase-like 2 0.026799
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0267591
HDLBP high density lipoprotein binding protein 0.0265907
TMSB4X thymosin beta 4, X-linked 0.0264494
TXNIP thioredoxin interacting protein 0.0260578
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0259315
GOLGB1 golgin B1 0.0254751
MCL1 myeloid cell leukemia 1 0.025386
LDHA lactate dehydrogenase A 0.0247451
NPAS2 neuronal PAS domain protein 2 0.024721
PDIA4 protein disulfide isomerase family A, member 4 0.0244356
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0240123
BCAR3 breast cancer anti-estrogen resistance 3 0.0239837
EMP1 epithelial membrane protein 1 0.0239663
SOX9 SRY (sex determining region Y)-box 9 0.0235493
PLEC plectin 0.0230312
JUN jun proto-oncogene 0.0229179
CALR calreticulin 0.0219977
RGS4 regulator of G-protein signaling 4 0.0217672
RPL12 ribosomal protein L12 0.0217515
PRELID2 PRELI domain containing 2 0.0209381
NT5E 5'-nucleotidase, ecto (CD73) 0.020671
CAPN2 calpain 2, (m/II) large subunit 0.020645
TM4SF1 transmembrane 4 L six family member 1 0.0204022
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0201262
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0201027
CANX calnexin 0.0198854
RPS4X ribosomal protein S4, X-linked 0.0195451
CSNK1A1 casein kinase 1, alpha 1 0.0195073
PYGB phosphorylase, glycogen; brain 0.0192727
INTS6 integrator complex subunit 6 0.0192713
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0190846
PODXL podocalyxin-like 0.0189779
CXCL8 chemokine (C-X-C motif) ligand 8 0.0185895
ARRDC3 arrestin domain containing 3 0.0184404
NEK10 NIMA-related kinase 10 0.018073
ADARB1 adenosine deaminase, RNA-specific, B1 0.0176252
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0176202
ANGPTL4 angiopoietin-like 4 0.0175456
ARHGAP5 Rho GTPase activating protein 5 0.0175336
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0175205
SYNE2 spectrin repeat containing, nuclear envelope 2 0.017451
IQGAP1 IQ motif containing GTPase activating protein 1 0.0172034
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0171747
TPM3 tropomyosin 3 0.0171069
RPL4 ribosomal protein L4 0.0169156
RPS18 ribosomal protein S18 0.0168771
RCOR1 REST corepressor 1 0.0168686
SQSTM1 sequestosome 1 0.0168578
SPAG9 sperm associated antigen 9 0.0167361
HMGA1 high mobility group AT-hook 1 0.0167129
RPS17 ribosomal protein S17 0.0166966
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0166933
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0166852
RPS8 ribosomal protein S8 0.0165973
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0165747
RAP2B RAP2B, member of RAS oncogene family 0.0164863
SMAD3 SMAD family member 3 0.0164407
RPL26 ribosomal protein L26 0.0163983
RPL7 ribosomal protein L7 0.0162158
RPL3 ribosomal protein L3 0.0159232
USP9X ubiquitin specific peptidase 9, X-linked 0.0159053
SGMS2 sphingomyelin synthase 2 0.0159029
RPS27 ribosomal protein S27 0.0157855
RUNX1 runt-related transcription factor 1 0.0156043
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0154348
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0152424
ZEB1 zinc finger E-box binding homeobox 1 0.0152106
CEP250 centrosomal protein 250kDa 0.0150739
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0149336
ACTN1 actinin, alpha 1 0.0148772
TAC4 tachykinin 4 (hemokinin) 0.0148362
ZMIZ1 zinc finger, MIZ-type containing 1 0.0147537

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.131341
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0995189
PTMA prothymosin, alpha -0.099116
DLG1 discs, large homolog 1 (Drosophila) -0.094342
POTEF POTE ankyrin domain family, member F -0.0783161
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0713933
WSB1 WD repeat and SOCS box containing 1 -0.0589574
TMSB10 thymosin beta 10 -0.0587333
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0573731
TP63 tumor protein p63 -0.0535117
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0468076
RPL35A ribosomal protein L35a -0.0425757
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0410969
EFNA5 ephrin-A5 -0.0380597
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0379252
EPHA4 EPH receptor A4 -0.0368914
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0354602
RBM25 RNA binding motif protein 25 -0.0330094
ZNF292 zinc finger protein 292 -0.0328597
ZMYND8 zinc finger, MYND-type containing 8 -0.0327716
TNS3 tensin 3 -0.0323638
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0317052
PTK2 protein tyrosine kinase 2 -0.0314241
WDR45B WD repeat domain 45B -0.0309399
PNISR PNN-interacting serine/arginine-rich protein -0.0291218
RTN4 reticulon 4 -0.0290861
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0290095
WARS1 tryptophanyl-tRNA synthetase 1 -0.0283334
PIAS2 protein inhibitor of activated STAT, 2 -0.0277943
THOC2 THO complex 2 -0.0277036
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0276167
SRGN serglycin -0.0274911
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0272013
NPEPPS aminopeptidase puromycin sensitive -0.0269742
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0269477
RPS6 ribosomal protein S6 -0.0268231
RBM39 RNA binding motif protein 39 -0.0262617
FTL ferritin, light polypeptide -0.0260525
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0259148
BRWD1 bromodomain and WD repeat domain containing 1 -0.0254723
CENPF centromere protein F, 350/400kDa -0.0251314
KPNB1 karyopherin (importin) beta 1 -0.025068
GARS1 glycyl-tRNA synthetase 1 -0.0249535
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0248554
CD44 CD44 molecule (Indian blood group) -0.0247814
RAI1 retinoic acid induced 1 -0.0245344
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0244121
ACTG1 actin gamma 1 -0.0227223
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0226321
ANKRD12 ankyrin repeat domain 12 -0.0225159
FUS FUS RNA binding protein -0.0224675
GNAS GNAS complex locus -0.0222549
KDM3A lysine (K)-specific demethylase 3A -0.0222384
SRPK2 SRSF protein kinase 2 -0.022126
XPO1 exportin 1 -0.0219488
COL5A2 collagen, type V, alpha 2 -0.0217868
EPB41 erythrocyte membrane protein band 4.1 -0.0215953
HLA-B major histocompatibility complex, class I, B -0.0213378
TMEM123 transmembrane protein 123 -0.0209738
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0209446
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0207358
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0204337
ZNF148 zinc finger protein 148 -0.0202122
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0201968
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.020167
ADGRG6 adhesion G protein-coupled receptor G6 -0.0201093
RIGI RNA sensor RIG-I -0.0201071
GSK3B glycogen synthase kinase 3 beta -0.0199696
GLG1 golgi glycoprotein 1 -0.0199567
GOLGA4 golgin A4 -0.0197726
RPS21 ribosomal protein S21 -0.0197464
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0195471
EHBP1 EH domain binding protein 1 -0.0194858
PUM2 pumilio RNA-binding family member 2 -0.0193021
NAMPT nicotinamide phosphoribosyltransferase -0.0190329
TOP1 topoisomerase (DNA) I -0.0188996
EIF3M eukaryotic translation initiation factor 3, subunit M -0.0188836
CCNL1 cyclin L1 -0.0187178
S100A9 S100 calcium binding protein A9 -0.0187022
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0186213
WASF2 WAS protein family, member 2 -0.0185949
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0185861
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0184257
SEPTIN7 septin 7 -0.0184184
ANKRD28 ankyrin repeat domain 28 -0.0184029
NCOR1 nuclear receptor corepressor 1 -0.0183577
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 -0.0183394
TTC28 tetratricopeptide repeat domain 28 -0.0182758
MAP4 microtubule-associated protein 4 -0.0182475
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0182182
UBE3C ubiquitin protein ligase E3C -0.0180311
FTH1 ferritin, heavy polypeptide 1 -0.0179679
MATR3 matrin 3 -0.017851
EGR1 early growth response 1 -0.0177735
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0176625
SBF2 SET binding factor 2 -0.0176261
FBXO11 F-box protein 11 -0.0174541
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0173084
NF1 neurofibromin 1 -0.0172889
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0172879