Dabrafenib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.239843
MT2A metallothionein 2A 0.228717
MCL1 myeloid cell leukemia 1 0.222994
AKAP12 A kinase (PRKA) anchor protein 12 0.211364
GRAMD1B GRAM domain containing 1B 0.141804
RPL19 ribosomal protein L19 0.135169
TFPI2 tissue factor pathway inhibitor 2 0.113696
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.104869
TM4SF1 transmembrane 4 L six family member 1 0.104759
EIF1 eukaryotic translation initiation factor 1 0.103981
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0910162
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0892501
ANKRD11 ankyrin repeat domain 11 0.0718341
SOD2 superoxide dismutase 2, mitochondrial 0.0714767
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0701666
HSPA8 heat shock 70kDa protein 8 0.0699661
PYGL phosphorylase, glycogen, liver 0.0698904
TIMP1 TIMP metallopeptidase inhibitor 1 0.0691473
MYH9 myosin, heavy chain 9, non-muscle 0.0689789
IGFBP3 insulin-like growth factor binding protein 3 0.0686251
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0675056
RPL7 ribosomal protein L7 0.0638938
FAM107B family with sequence similarity 107, member B 0.0631684
MACF1 microtubule-actin crosslinking factor 1 0.061869
EEF2 eukaryotic translation elongation factor 2 0.0598743
DOCK4 dedicator of cytokinesis 4 0.0595303
RPS12 ribosomal protein S12 0.0585382
STC1 stanniocalcin 1 0.0522958
LAMC2 laminin, gamma 2 0.0518647
RPLP1 ribosomal protein, large, P1 0.0509532
TPM3 tropomyosin 3 0.0508981
KIF5B kinesin family member 5B 0.0506076
APLP2 amyloid beta (A4) precursor-like protein 2 0.0497167
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0490289
FLNB filamin B, beta 0.0487019
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0479623
RPS27 ribosomal protein S27 0.0467473
PLEC plectin 0.0465613
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0445581
EEF1G eukaryotic translation elongation factor 1 gamma 0.0434825
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.043055
RPS17 ribosomal protein S17 0.0428343
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0421698
ERRFI1 ERBB receptor feedback inhibitor 1 0.0414144
CXCL8 chemokine (C-X-C motif) ligand 8 0.0413607
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0410807
RPL23 ribosomal protein L23 0.0407831
HLA-E major histocompatibility complex, class I, E 0.0404015
RPL37A ribosomal protein L37a 0.0402649
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0379778
CALR calreticulin 0.0376723
C15ORF48 chromosome 15 open reading frame 48 0.0376435
NRG1 neuregulin 1 0.0371153
RPL3 ribosomal protein L3 0.0360979
RPS8 ribosomal protein S8 0.0359927
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0352605
BMP6 bone morphogenetic protein 6 0.0352313
SMOC1 SPARC related modular calcium binding 1 0.0348337
RPS25 ribosomal protein S25 0.0344209
STC2 stanniocalcin 2 0.0339468
FLNA filamin A, alpha 0.0336155
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0333531
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0328414
UPP1 uridine phosphorylase 1 0.0324646
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0324328
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.032103
ASPH aspartate beta-hydroxylase 0.0317274
RPL4 ribosomal protein L4 0.0316924
SFTPA2 surfactant protein A2 0.0315585
APP amyloid beta (A4) precursor protein 0.0314617
HLA-A major histocompatibility complex, class I, A 0.0310769
HYOU1 hypoxia up-regulated 1 0.0304273
GOLGB1 golgin B1 0.0299834
RPL31 ribosomal protein L31 0.0297818
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0297512
ANGPTL4 angiopoietin-like 4 0.0294373
RPL26 ribosomal protein L26 0.0290433
RPS20 ribosomal protein S20 0.0287238
RPL11 ribosomal protein L11 0.0285801
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 0.0284568
DOCK5 dedicator of cytokinesis 5 0.0281867
ZEB1 zinc finger E-box binding homeobox 1 0.028097
ATF4 activating transcription factor 4 0.027556
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0274354
TLN1 talin 1 0.0273942
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0273003
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0272327
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0268815
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.026396
RPS29 ribosomal protein S29 0.0261871
KRT18 keratin 18, type I 0.0260667
RPS3 ribosomal protein S3 0.0260251
RPL37 ribosomal protein L37 0.0258777
WWOX WW domain containing oxidoreductase 0.0252813
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0249326
AGO2 argonaute RISC catalytic component 2 0.0249064
SH3KBP1 SH3-domain kinase binding protein 1 0.0249002
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0248689
CDCP1 CUB domain containing protein 1 0.02448
NUMB numb homolog (Drosophila) 0.0244354

decreased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 -0.17433
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.108696
POTEF POTE ankyrin domain family, member F -0.0927662
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0879192
NEGR1 neuronal growth regulator 1 -0.084396
IGF2 insulin-like growth factor 2 -0.0741714
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0726899
BICC1 BicC family RNA binding protein 1 -0.0700444
ERBIN erbb2 interacting protein -0.0595591
FNDC3B fibronectin type III domain containing 3B -0.0581442
FGB fibrinogen beta chain -0.0577739
BASP1 brain abundant, membrane attached signal protein 1 -0.0551358
ACTG1 actin gamma 1 -0.0538033
EFNA5 ephrin-A5 -0.0532464
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0491644
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0457002
PFN1 profilin 1 -0.043406
RASAL2 RAS protein activator like 2 -0.0425386
IGFBP4 insulin-like growth factor binding protein 4 -0.0424283
DST dystonin -0.0422573
PLS3 plastin 3 -0.0421513
TTC28 tetratricopeptide repeat domain 28 -0.0409773
PRR16 proline rich 16 -0.0405073
TRIO trio Rho guanine nucleotide exchange factor -0.0404546
AHR aryl hydrocarbon receptor -0.0404106
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0403738
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0403625
ZBTB20 zinc finger and BTB domain containing 20 -0.040253
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0389346
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0371057
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0365641
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.035554
HDAC9 histone deacetylase 9 -0.0355286
RBM25 RNA binding motif protein 25 -0.035488
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0350484
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0349653
MBNL1 muscleblind-like splicing regulator 1 -0.0343985
WDR43 WD repeat domain 43 -0.0341666
SLC38A2 solute carrier family 38, member 2 -0.0339619
TPM1 tropomyosin 1 (alpha) -0.0333833
GLIS3 GLIS family zinc finger 3 -0.0330345
LPP LIM domain containing preferred translocation partner in lipoma -0.0325789
NTN4 netrin 4 -0.031996
DENND4A DENN/MADD domain containing 4A -0.0318723
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0318215
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0316427
EHBP1 EH domain binding protein 1 -0.0314123
CCNL1 cyclin L1 -0.0313131
BABAM2 BRISC and BRCA1 A complex member 2 -0.0312416
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0311837
RHOA ras homolog family member A -0.0308871
ARHGAP12 Rho GTPase activating protein 12 -0.0301626
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0301251
VCL vinculin -0.0297916
KMT2E lysine (K)-specific methyltransferase 2E -0.02904
ECT2 epithelial cell transforming 2 -0.028627
MAML3 mastermind-like 3 (Drosophila) -0.0283271
CHN1 chimerin 1 -0.0283053
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0280026
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0277803
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0277684
ADGRG6 adhesion G protein-coupled receptor G6 -0.0275504
MYOF myoferlin -0.0270925
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0269277
NOP58 NOP58 ribonucleoprotein -0.0268401
NEBL nebulette -0.0266721
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0265483
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0262796
FTL ferritin, light polypeptide -0.0259848
THBS1 thrombospondin 1 -0.0259828
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -0.0259139
UTRN utrophin -0.0257887
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0255441
SAMD4A sterile alpha motif domain containing 4A -0.0252715
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.025026
SLC35F3 solute carrier family 35, member F3 -0.024592
SMAD2 SMAD family member 2 -0.0240661
ANKRD28 ankyrin repeat domain 28 -0.0239475
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0238057
ZNF644 zinc finger protein 644 -0.0236551
DGKD diacylglycerol kinase, delta 130kDa -0.0233107
CALD1 caldesmon 1 -0.0232464
ZNF207 zinc finger protein 207 -0.0231822
PDE8A phosphodiesterase 8A -0.0231448
TGFB2 transforming growth factor, beta 2 -0.0229265
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0227369
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0226336
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0224897
PAWR PRKC, apoptosis, WT1, regulator -0.0223761
TNS3 tensin 3 -0.0222986
LMNA lamin A/C -0.0222334
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0221626
CHD9 chromodomain helicase DNA binding protein 9 -0.0220879
NAMPT nicotinamide phosphoribosyltransferase -0.0220671
ARHGAP29 Rho GTPase activating protein 29 -0.0219658
MT1X metallothionein 1X -0.0219475
BZW2 basic leucine zipper and W2 domains 2 -0.0218419
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0216865
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0212481
ALCAM activated leukocyte cell adhesion molecule -0.0211158