Dabrafenib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.481865
MCL1 myeloid cell leukemia 1 0.221279
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.166714
ERRFI1 ERBB receptor feedback inhibitor 1 0.100585
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.09891
VIM vimentin 0.0931633
PABPC1 poly(A) binding protein, cytoplasmic 1 0.086008
PYGL phosphorylase, glycogen, liver 0.0783411
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0729679
GRAMD1B GRAM domain containing 1B 0.0718579
EEF2 eukaryotic translation elongation factor 2 0.0698748
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0680818
THSD4 thrombospondin, type I, domain containing 4 0.066796
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0648454
ATP11A ATPase, class VI, type 11A 0.0638232
MYH9 myosin, heavy chain 9, non-muscle 0.0630966
XPOT exportin, tRNA 0.0594176
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0588923
ZSWIM6 zinc finger, SWIM-type containing 6 0.0584669
LOXL2 lysyl oxidase-like 2 0.0566169
RPS27 ribosomal protein S27 0.0546368
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0538765
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0536314
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0514253
PDE4D phosphodiesterase 4D, cAMP-specific 0.0485967
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0466253
ANKRD11 ankyrin repeat domain 11 0.0465661
KRT18 keratin 18, type I 0.0465605
STC1 stanniocalcin 1 0.0464216
CTTN cortactin 0.0461732
RPL19 ribosomal protein L19 0.0459753
SMAD3 SMAD family member 3 0.0457417
RPS12 ribosomal protein S12 0.0452806
DOCK5 dedicator of cytokinesis 5 0.0442812
PLEC plectin 0.0437392
SFPQ splicing factor proline/glutamine-rich 0.0435546
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0434172
TLN1 talin 1 0.0430236
SVIL supervillin 0.0421939
TPI1 triosephosphate isomerase 1 0.0420374
AFF3 AF4/FMR2 family, member 3 0.0412082
HSPA8 heat shock 70kDa protein 8 0.041175
FBXO11 F-box protein 11 0.040648
RAB7A RAB7A, member RAS oncogene family 0.0406235
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0406153
TPM3 tropomyosin 3 0.0403409
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0400232
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0394869
HOMER1 homer scaffolding protein 1 0.0394037
IGF1R insulin-like growth factor 1 receptor 0.0393985
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0390885
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0386137
ELL2 elongation factor, RNA polymerase II, 2 0.0384771
DDIT3 DNA-damage-inducible transcript 3 0.0382467
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0382373
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0377201
AEBP2 AE binding protein 2 0.0374168
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0370854
EXOC4 exocyst complex component 4 0.0367974
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0364964
FMNL2 formin-like 2 0.036241
SLC38A2 solute carrier family 38, member 2 0.0354133
EEF1G eukaryotic translation elongation factor 1 gamma 0.0352451
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0351122
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0349866
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0348921
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0345617
GOLGB1 golgin B1 0.0345088
CDK17 cyclin-dependent kinase 17 0.034225
SESN2 sestrin 2 0.0341708
YARS1 tyrosyl-tRNA synthetase 1 0.0340329
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0339586
EPAS1 endothelial PAS domain protein 1 0.0339047
EXT1 exostosin glycosyltransferase 1 0.0337643
RPL37 ribosomal protein L37 0.0327414
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0326474
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.032607
MARS1 methionyl-tRNA synthetase 1 0.0322833
SHB Src homology 2 domain containing adaptor protein B 0.0321729
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0321306
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0318755
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0318705
SQSTM1 sequestosome 1 0.0318109
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0317592
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0314248
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0314145
MYO10 myosin X 0.0311864
NFE2L1 nuclear factor, erythroid 2-like 1 0.0310739
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0309331
ACTN1 actinin, alpha 1 0.0308858
RPS4X ribosomal protein S4, X-linked 0.0306265
RPS3 ribosomal protein S3 0.0303763
TRIP12 thyroid hormone receptor interactor 12 0.0302953
HYOU1 hypoxia up-regulated 1 0.0301625
ATG7 autophagy related 7 0.0299311
EIF1 eukaryotic translation initiation factor 1 0.0295096
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0294955
RPL37A ribosomal protein L37a 0.029432
SND1 staphylococcal nuclease and tudor domain containing 1 0.0291402
MAGEA4 melanoma antigen family A4 0.0290003

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0741274
TFPI2 tissue factor pathway inhibitor 2 -0.0706544
POTEF POTE ankyrin domain family, member F -0.055877
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0538635
YBX3 Y box binding protein 3 -0.0527074
PFN1 profilin 1 -0.0480926
RTN4 reticulon 4 -0.0421081
CENPF centromere protein F, 350/400kDa -0.0411386
EML4 echinoderm microtubule associated protein like 4 -0.0383725
MKI67 marker of proliferation Ki-67 -0.0376272
BBX bobby sox homolog (Drosophila) -0.0371447
ANKRD12 ankyrin repeat domain 12 -0.036882
PHIP pleckstrin homology domain interacting protein -0.034821
SMC4 structural maintenance of chromosomes 4 -0.0340608
ZNF292 zinc finger protein 292 -0.0311752
WSB1 WD repeat and SOCS box containing 1 -0.0288742
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.028326
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0282987
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0279479
SDK1 sidekick cell adhesion molecule 1 -0.0269451
TMEM165 transmembrane protein 165 -0.02569
WDPCP WD repeat containing planar cell polarity effector -0.0255221
ZBTB20 zinc finger and BTB domain containing 20 -0.0251476
ADGRG6 adhesion G protein-coupled receptor G6 -0.0245472
KMT2E lysine (K)-specific methyltransferase 2E -0.0244894
MIS18BP1 MIS18 binding protein 1 -0.0242144
DIAPH3 diaphanous-related formin 3 -0.0240265
CCNL1 cyclin L1 -0.0240049
ANKRD28 ankyrin repeat domain 28 -0.0228583
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0228377
PTMA prothymosin, alpha -0.0227346
LATS2 large tumor suppressor kinase 2 -0.0224595
RBM25 RNA binding motif protein 25 -0.0219024
SBF2 SET binding factor 2 -0.0214076
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0212234
XPO1 exportin 1 -0.0210364
CBX3 chromobox homolog 3 -0.020988
ATXN1 ataxin 1 -0.0207474
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0207412
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.020682
TAPBP TAP binding protein (tapasin) -0.0204594
ANLN anillin, actin binding protein -0.0204588
GOLGA4 golgin A4 -0.0203879
GNAS GNAS complex locus -0.0200999
SCAF11 SR-related CTD-associated factor 11 -0.0200794
DEK DEK proto-oncogene -0.0200021
BRWD3 bromodomain and WD repeat domain containing 3 -0.019848
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0197687
SRPK2 SRSF protein kinase 2 -0.0196907
RSF1 remodeling and spacing factor 1 -0.0193856
CENPE centromere protein E, 312kDa -0.0192987
TAS2R14 taste receptor, type 2, member 14 -0.0191575
THOC2 THO complex 2 -0.0189131
SEPTIN7 septin 7 -0.0189041
PTEN phosphatase and tensin homolog -0.0188574
WDR45B WD repeat domain 45B -0.0186127
IGF2 insulin-like growth factor 2 -0.0185345
ACTG1 actin gamma 1 -0.0184493
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0183725
QKI QKI, KH domain containing, RNA binding -0.0175302
SRRM1 serine/arginine repetitive matrix 1 -0.0170128
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0169201
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.016872
MED13L mediator complex subunit 13-like -0.0168387
BSG basigin (Ok blood group) -0.0167953
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0167524
RPS15 ribosomal protein S15 -0.0167361
TPX2 TPX2, microtubule-associated -0.0165288
NKTR natural killer cell triggering receptor -0.016459
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0163658
CCDC88A coiled-coil domain containing 88A -0.0162932
SINHCAF SIN3-HDAC complex associated factor -0.0162898
SGO2 shugoshin 2 -0.0162716
RPS21 ribosomal protein S21 -0.0162472
IFIH1 interferon induced with helicase C domain 1 -0.0161058
RAD51B RAD51 paralog B -0.0160619
TMPO thymopoietin -0.0159256
RLF rearranged L-myc fusion -0.0158688
CEP192 centrosomal protein 192kDa -0.0158251
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0158141
RYR3 ryanodine receptor 3 -0.0157572
KTN1 kinectin 1 (kinesin receptor) -0.0157393
TFG TRK-fused gene -0.0156261
R3HDM1 R3H domain containing 1 -0.0156198
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0155574
BUB1 BUB1 mitotic checkpoint serine/threonine kinase -0.0155154
ZNF654 zinc finger protein 654 -0.015455
RIGI RNA sensor RIG-I -0.0152263
BMP5 bone morphogenetic protein 5 -0.0152141
NLGN1 neuroligin 1 -0.0149477
RSRC1 arginine/serine-rich coiled-coil 1 -0.0149297
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0149074
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E -0.0147962
KNL1 kinetochore scaffold 1 -0.014787
TNPO3 transportin 3 -0.0147784
STXBP3 syntaxin binding protein 3 -0.0147685
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0147173
COL4A5 collagen, type IV, alpha 5 -0.0147019
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0146151
PNISR PNN-interacting serine/arginine-rich protein -0.0145865