Dabrafenib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.158951
MCL1 myeloid cell leukemia 1 0.155376
DOCK4 dedicator of cytokinesis 4 0.138921
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.108243
PSD3 pleckstrin and Sec7 domain containing 3 0.0871974
SMOC1 SPARC related modular calcium binding 1 0.086048
GRAMD1B GRAM domain containing 1B 0.0829618
VIM vimentin 0.0825729
ZSWIM6 zinc finger, SWIM-type containing 6 0.0764016
CTIF CBP80/20-dependent translation initiation factor 0.072334
PRKN parkin RBR E3 ubiquitin protein ligase 0.0720823
SH3KBP1 SH3-domain kinase binding protein 1 0.0714511
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0684436
EEF2 eukaryotic translation elongation factor 2 0.0637239
SPTBN1 spectrin, beta, non-erythrocytic 1 0.063381
TGFBR1 transforming growth factor, beta receptor 1 0.0597343
RPL19 ribosomal protein L19 0.0577073
BMP6 bone morphogenetic protein 6 0.0560133
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0545174
PYGL phosphorylase, glycogen, liver 0.0537848
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0537072
FMNL2 formin-like 2 0.0530074
CXCL8 chemokine (C-X-C motif) ligand 8 0.0527046
RPS12 ribosomal protein S12 0.0526188
LSAMP limbic system-associated membrane protein 0.0522869
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0510646
ESYT2 extended synaptotagmin-like protein 2 0.0507226
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0497023
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0495717
CDH13 cadherin 13 0.0491631
CREB5 cAMP responsive element binding protein 5 0.0489901
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0475049
AKAP13 A kinase (PRKA) anchor protein 13 0.0469054
MAML3 mastermind-like 3 (Drosophila) 0.0467596
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0465662
RGS2 regulator of G-protein signaling 2 0.0464957
MYO10 myosin X 0.0436712
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0430878
RPS8 ribosomal protein S8 0.0428942
RPS27 ribosomal protein S27 0.0428464
STC1 stanniocalcin 1 0.042665
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.040587
ITPK1 inositol-tetrakisphosphate 1-kinase 0.0404942
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0402205
RAB3B RAB3B, member RAS oncogene family 0.0400136
RPL26 ribosomal protein L26 0.0399275
NCOR2 nuclear receptor corepressor 2 0.0396311
MYH9 myosin, heavy chain 9, non-muscle 0.0392358
PCBP2 poly(rC) binding protein 2 0.0383676
NT5C2 5'-nucleotidase, cytosolic II 0.038005
RPL37A ribosomal protein L37a 0.0379628
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0375775
SQSTM1 sequestosome 1 0.037054
EZR ezrin 0.0366917
HSPA8 heat shock 70kDa protein 8 0.0364758
NRXN3 neurexin 3 0.0361159
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0359233
EEF1G eukaryotic translation elongation factor 1 gamma 0.0357201
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0353579
RPS4X ribosomal protein S4, X-linked 0.0349531
RPL7 ribosomal protein L7 0.0346963
RPS17 ribosomal protein S17 0.0345687
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0345424
FAM107B family with sequence similarity 107, member B 0.0343838
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0328193
SMAD2 SMAD family member 2 0.0321975
APLP2 amyloid beta (A4) precursor-like protein 2 0.0316742
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0314685
RPLP1 ribosomal protein, large, P1 0.0311962
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0308523
RPL31 ribosomal protein L31 0.0304741
RPS2 ribosomal protein S2 0.0294228
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0289542
RPL4 ribosomal protein L4 0.0289163
SOX9 SRY (sex determining region Y)-box 9 0.0283335
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.028075
MSN moesin 0.0280633
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.027679
RPL3 ribosomal protein L3 0.027624
EXT1 exostosin glycosyltransferase 1 0.0275355
NCAM1 neural cell adhesion molecule 1 0.0274458
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0272995
ADGRD1 adhesion G protein-coupled receptor D1 0.0271158
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0269087
RPL23 ribosomal protein L23 0.0268837
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0265725
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0263981
TPM3 tropomyosin 3 0.0263693
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0263429
INTS6 integrator complex subunit 6 0.0261781
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0260211
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.025411
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0249802
ERRFI1 ERBB receptor feedback inhibitor 1 0.0247492
SOD2 superoxide dismutase 2, mitochondrial 0.0245481
INHBA inhibin, beta A 0.0244347
TFPI2 tissue factor pathway inhibitor 2 0.0243655
DOCK5 dedicator of cytokinesis 5 0.0242289
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0240913
RPS6 ribosomal protein S6 0.0238381

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.248974
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.108717
SMYD3 SET and MYND domain containing 3 -0.107113
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0969675
NAMPT nicotinamide phosphoribosyltransferase -0.0968453
COL5A2 collagen, type V, alpha 2 -0.0940575
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0813754
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0808947
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0780322
EFNA5 ephrin-A5 -0.0754541
MYOF myoferlin -0.0731888
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0657159
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0591631
TXNRD1 thioredoxin reductase 1 -0.0544528
GDA guanine deaminase -0.0538189
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0537682
LIMCH1 LIM and calponin homology domains 1 -0.0517852
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.05065
PTGR1 prostaglandin reductase 1 -0.0500468
PBX1 pre-B-cell leukemia homeobox 1 -0.0485799
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0480597
FNDC3B fibronectin type III domain containing 3B -0.0463695
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0449875
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0431829
NCKAP5 NCK-associated protein 5 -0.041864
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0416676
ADGRB3 adhesion G protein-coupled receptor B3 -0.0413252
ASPH aspartate beta-hydroxylase -0.0407474
TRIO trio Rho guanine nucleotide exchange factor -0.0399567
SCN3A sodium channel, voltage gated, type III alpha subunit -0.0391339
WSB1 WD repeat and SOCS box containing 1 -0.0370254
OSMR oncostatin M receptor -0.0367229
TGFBI transforming growth factor, beta-induced, 68kDa -0.0365772
TMSB10 thymosin beta 10 -0.0362329
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.035861
BCAS3 breast carcinoma amplified sequence 3 -0.0357989
DPYD dihydropyrimidine dehydrogenase -0.035375
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0353471
NCOA7 nuclear receptor coactivator 7 -0.0351279
CTSC cathepsin C -0.0348597
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0333773
NEK7 NIMA-related kinase 7 -0.0325714
PALLD palladin, cytoskeletal associated protein -0.0324327
CD109 CD109 molecule -0.0305619
COL4A5 collagen, type IV, alpha 5 -0.0301444
ZMYND8 zinc finger, MYND-type containing 8 -0.0301251
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0295382
S100A6 S100 calcium binding protein A6 -0.0290305
PDE1A phosphodiesterase 1A, calmodulin-dependent -0.0287622
KIAA0825 KIAA0825 -0.0281805
WARS1 tryptophanyl-tRNA synthetase 1 -0.0267369
AFG2A AFG2 AAA ATPase homolog A -0.0267127
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0263359
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0262988
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0262654
PTEN phosphatase and tensin homolog -0.0261782
MAML2 mastermind-like 2 (Drosophila) -0.0261574
TMX4 thioredoxin-related transmembrane protein 4 -0.025861
IGF1R insulin-like growth factor 1 receptor -0.0251338
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.0246338
GNAS GNAS complex locus -0.0244519
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0240892
PDE4D phosphodiesterase 4D, cAMP-specific -0.0240874
SAMD4A sterile alpha motif domain containing 4A -0.0239706
TENM3 teneurin transmembrane protein 3 -0.0238276
RTN1 reticulon 1 -0.0236962
ZEB2 zinc finger E-box binding homeobox 2 -0.0236826
PCBP3 poly(rC) binding protein 3 -0.0234658
NF1 neurofibromin 1 -0.0232826
IFIH1 interferon induced with helicase C domain 1 -0.0230264
COL4A6 collagen, type IV, alpha 6 -0.0228432
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0228162
AOPEP aminopeptidase O (putative) -0.0227586
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0225569
NCAM2 neural cell adhesion molecule 2 -0.0225494
PTMA prothymosin, alpha -0.0223912
PDE7B phosphodiesterase 7B -0.0222491
ATAD1 ATPase family, AAA domain containing 1 -0.0220161
AGFG1 ArfGAP with FG repeats 1 -0.0218924
ELL2 elongation factor, RNA polymerase II, 2 -0.0218494
HLA-B major histocompatibility complex, class I, B -0.0210082
SPAG9 sperm associated antigen 9 -0.0209694
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0208809
THOC2 THO complex 2 -0.0208367
SRPK2 SRSF protein kinase 2 -0.0208189
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0205611
TBC1D19 TBC1 domain family, member 19 -0.0204992
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0202941
VCL vinculin -0.0199465
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0198921
CENPF centromere protein F, 350/400kDa -0.0195642
RTN4 reticulon 4 -0.0191183
FRMD4B FERM domain containing 4B -0.0189624
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa -0.0188753
SSBP2 single-stranded DNA binding protein 2 -0.0188349
NPEPPS aminopeptidase puromycin sensitive -0.0187876
TTC28 tetratricopeptide repeat domain 28 -0.0187761
ADD3 adducin 3 (gamma) -0.0187305
MYPN myopalladin -0.0185633
MBD5 methyl-CpG binding domain protein 5 -0.0184555