Dabrafenib_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

196 genes differentially expressed following the Dabrafenib_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STC1 stanniocalcin 1 0.248282
FN1 fibronectin 1 0.205834
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.160599
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.140236
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.133321
STK39 serine threonine kinase 39 0.132685
TM4SF1 transmembrane 4 L six family member 1 0.112047
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.110188
LSAMP limbic system-associated membrane protein 0.0989252
CSNK1A1 casein kinase 1, alpha 1 0.0971047
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0943949
TRIO trio Rho guanine nucleotide exchange factor 0.0921934
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0914079
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.091163
VIM vimentin 0.0907098
KLF6 Kruppel-like factor 6 0.0906462
ITPRID2 ITPR interacting domain containing 2 0.0885056
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0877797
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0855143
MYO10 myosin X 0.0834278
PKM pyruvate kinase, muscle 0.0756001
EXT1 exostosin glycosyltransferase 1 0.0710426
PTPRG protein tyrosine phosphatase, receptor type, G 0.0673314
COL6A3 collagen, type VI, alpha 3 0.0643796
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0627279
APP amyloid beta (A4) precursor protein 0.0613439
AKAP12 A kinase (PRKA) anchor protein 12 0.0603187
MED13 mediator complex subunit 13 0.060071
HMGA2 high mobility group AT-hook 2 0.0594337
MYO5B myosin VB 0.0578642
ANKRD11 ankyrin repeat domain 11 0.0560833
SMAD3 SMAD family member 3 0.0555729
EEF2 eukaryotic translation elongation factor 2 0.055219
INHBA inhibin, beta A 0.0542449
PSD3 pleckstrin and Sec7 domain containing 3 0.051566
SOD2 superoxide dismutase 2, mitochondrial 0.051256
AFF4 AF4/FMR2 family, member 4 0.0507277
MMP1 matrix metallopeptidase 1 0.0505641
AK1 adenylate kinase 1 0.0504021
LAMB3 laminin, beta 3 0.0500154
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0499601
ERBIN erbb2 interacting protein 0.049324
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0483987
LDHA lactate dehydrogenase A 0.0482638
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0480624
FOXP1 forkhead box P1 0.0476083
MBNL1 muscleblind-like splicing regulator 1 0.0456028
RPS16 ribosomal protein S16 0.0449937
BAIAP2L1 BAI1-associated protein 2-like 1 0.0447014
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0439916
FNDC3B fibronectin type III domain containing 3B 0.0419284
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0396218
ENO1 enolase 1, (alpha) 0.0385245
MAP4 microtubule-associated protein 4 0.0365111
NCOR2 nuclear receptor corepressor 2 0.0332739
FAT1 FAT atypical cadherin 1 0.0321675
NAP1L1 nucleosome assembly protein 1-like 1 0.0316856
MORF4L2 mortality factor 4 like 2 0.0315425
MMP12 matrix metallopeptidase 12 0.0311254
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0304911
CD44 CD44 molecule (Indian blood group) 0.0284172
KMT2C lysine (K)-specific methyltransferase 2C 0.0283709
S100A10 S100 calcium binding protein A10 0.0262927
MAML3 mastermind-like 3 (Drosophila) 0.0247926
SLC38A1 solute carrier family 38, member 1 0.0239382
SMYD3 SET and MYND domain containing 3 0.0235074
EIF1 eukaryotic translation initiation factor 1 0.0229746
ANO6 anoctamin 6 0.0228849
TJP1 tight junction protein 1 0.021974
PTK2 protein tyrosine kinase 2 0.0190244
S100A6 S100 calcium binding protein A6 0.0185675
JARID2 jumonji, AT rich interactive domain 2 0.0178111
EFNA5 ephrin-A5 0.0168755
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0168055
PRKCA protein kinase C, alpha 0.0168047
GLIS3 GLIS family zinc finger 3 0.0165204
ARHGAP12 Rho GTPase activating protein 12 0.0160324
RACK1 receptor for activated C kinase 1 0.0156264
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0150891
FAM13A family with sequence similarity 13, member A 0.0138518
TBC1D22A TBC1 domain family, member 22A 0.0127414
MACF1 microtubule-actin crosslinking factor 1 0.0109418
ANKRD28 ankyrin repeat domain 28 0.0104835
KDM4C lysine (K)-specific demethylase 4C 0.00984323
RPS8 ribosomal protein S8 0.00975488
COL5A2 collagen, type V, alpha 2 0.00915348
BMERB1 bMERB domain containing 1 0.00818328
SPTBN1 spectrin, beta, non-erythrocytic 1 0.00653562
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.00644244
RPS12 ribosomal protein S12 0.00501723
JMJD1C jumonji domain containing 1C 0.00423267
PGK1 phosphoglycerate kinase 1 0.00127939
RIGI RNA sensor RIG-I 0.00120102
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 6.80074E-4
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 5.16973E-4
ZNF292 zinc finger protein 292 3.08952E-5

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.157385
ZBTB20 zinc finger and BTB domain containing 20 -0.11838
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.110485
TPT1 tumor protein, translationally-controlled 1 -0.103466
PARD3 par-3 family cell polarity regulator -0.103002
RNF213 ring finger protein 213 -0.101997
LAMC2 laminin, gamma 2 -0.101822
TMSB10 thymosin beta 10 -0.0973069
EIF3A eukaryotic translation initiation factor 3, subunit A -0.092711
EGR1 early growth response 1 -0.0912618
RAD51B RAD51 paralog B -0.0910243
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0854336
SLC38A2 solute carrier family 38, member 2 -0.0850636
RPL15 ribosomal protein L15 -0.08347
TM9SF3 transmembrane 9 superfamily member 3 -0.081721
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0765787
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0758461
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.074438
FRMD5 FERM domain containing 5 -0.0713912
EGFR epidermal growth factor receptor -0.0680089
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0658692
FHIT fragile histidine triad -0.0656336
PTMA prothymosin, alpha -0.0651905
ANXA2 annexin A2 -0.0629623
CDH13 cadherin 13 -0.0629324
ATXN1 ataxin 1 -0.0620852
VCL vinculin -0.0614693
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.05945
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0593309
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.058643
YAP1 Yes-associated protein 1 -0.0584033
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0564444
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0557945
RPS13 ribosomal protein S13 -0.0538824
CAMKMT calmodulin-lysine N-methyltransferase -0.0538479
TAS2R14 taste receptor, type 2, member 14 -0.0537924
LAMA4 laminin, alpha 4 -0.0535084
TOP1 topoisomerase (DNA) I -0.0529432
RPL23 ribosomal protein L23 -0.0520416
LMO7 LIM domain 7 -0.0518527
FLNB filamin B, beta -0.0515578
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0513897
RPL31 ribosomal protein L31 -0.0481313
DSCAM Down syndrome cell adhesion molecule -0.0480531
CDK13 cyclin-dependent kinase 13 -0.0476454
DOCK5 dedicator of cytokinesis 5 -0.0474596
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0462851
CHD9 chromodomain helicase DNA binding protein 9 -0.0459487
NAMPT nicotinamide phosphoribosyltransferase -0.0456246
PTPRM protein tyrosine phosphatase, receptor type, M -0.0450859
RPL12 ribosomal protein L12 -0.0446138
NDRG1 N-myc downstream regulated 1 -0.0439225
RPL37 ribosomal protein L37 -0.0432257
CANX calnexin -0.0428645
SBF2 SET binding factor 2 -0.0427785
PDE10A phosphodiesterase 10A -0.0423869
IARS1 isoleucyl-tRNA synthetase 1 -0.0418727
PDLIM5 PDZ and LIM domain 5 -0.0415663
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0410597
SLTM SAFB-like, transcription modulator -0.0406937
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0403414
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0393823
NABP1 nucleic acid binding protein 1 -0.0393265
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0370433
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0364942
MYO1E myosin IE -0.0356059
NPAS2 neuronal PAS domain protein 2 -0.0355597
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0352488
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0349998
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.033903
BIRC6 baculoviral IAP repeat containing 6 -0.0337723
PRELID2 PRELI domain containing 2 -0.033611
OSBPL8 oxysterol binding protein-like 8 -0.0333504
CNKSR3 CNKSR family member 3 -0.0331683
GPC6 glypican 6 -0.0330062
RUNX1 runt-related transcription factor 1 -0.0327944
TTC3 tetratricopeptide repeat domain 3 -0.0327185
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0324636
DLG1 discs, large homolog 1 (Drosophila) -0.0317261
ASPH aspartate beta-hydroxylase -0.0309485
PCBP2 poly(rC) binding protein 2 -0.0303361
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0300873
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0295325
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0288891
FTL ferritin, light polypeptide -0.0281883
CALU calumenin -0.028173
MYOF myoferlin -0.0262766
GOLGA4 golgin A4 -0.0252285
MBD5 methyl-CpG binding domain protein 5 -0.0241436
STK24 serine/threonine kinase 24 -0.0240052
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0221617
NRG1 neuregulin 1 -0.0209021
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0204862
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0202347
TPM4 tropomyosin 4 -0.0202176
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0187734
ACTG1 actin gamma 1 -0.0186457
ELL2 elongation factor, RNA polymerase II, 2 -0.0184992
PDE4D phosphodiesterase 4D, cAMP-specific -0.0167352
ARHGAP26 Rho GTPase activating protein 26 -0.0161837