Dabrafenib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.229412
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.140648
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.129636
VIM vimentin 0.1233
CADM2 cell adhesion molecule 2 0.111184
HDAC9 histone deacetylase 9 0.109571
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.108388
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0939402
PCDH9 protocadherin 9 0.0866665
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0853601
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0835754
PCLO piccolo presynaptic cytomatrix protein 0.0820615
MACF1 microtubule-actin crosslinking factor 1 0.0752592
COL5A2 collagen, type V, alpha 2 0.0746918
ITGAV integrin, alpha V 0.0723688
NTM neurotrimin 0.0648022
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0630798
NHSL1 NHS-like 1 0.0616575
FNDC3B fibronectin type III domain containing 3B 0.0612533
APLP2 amyloid beta (A4) precursor-like protein 2 0.0607902
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0585868
MYH9 myosin, heavy chain 9, non-muscle 0.0583274
CALR calreticulin 0.0576768
HMCN1 hemicentin 1 0.0537059
PARD3B par-3 family cell polarity regulator beta 0.053198
ADGRV1 adhesion G protein-coupled receptor V1 0.0524244
EEF1G eukaryotic translation elongation factor 1 gamma 0.052147
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0509861
PCDH18 protocadherin 18 0.0509067
EEF2 eukaryotic translation elongation factor 2 0.0479409
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0479183
NFE2L1 nuclear factor, erythroid 2-like 1 0.0478366
COL3A1 collagen, type III, alpha 1 0.0458765
TPM3 tropomyosin 3 0.0453647
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0444573
SAMD4A sterile alpha motif domain containing 4A 0.0440316
PRELID2 PRELI domain containing 2 0.0438313
RPL19 ribosomal protein L19 0.0431319
RPL3 ribosomal protein L3 0.0424182
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0413866
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0410477
NACA nascent polypeptide-associated complex alpha subunit 0.0403207
SCFD1 sec1 family domain containing 1 0.0397308
FOXG1 forkhead box G1 0.0395266
ZEB2 zinc finger E-box binding homeobox 2 0.0394912
DOCK5 dedicator of cytokinesis 5 0.0392719
SLC38A2 solute carrier family 38, member 2 0.0386333
RPL7 ribosomal protein L7 0.0383665
APP amyloid beta (A4) precursor protein 0.0378
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0376477
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0374688
UTRN utrophin 0.037368
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 0.0366999
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.036546
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0363197
GPC4 glypican 4 0.0348548
TOX thymocyte selection-associated high mobility group box 0.0348377
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0341732
PCDH7 protocadherin 7 0.0337996
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0331245
ENO1 enolase 1, (alpha) 0.0331107
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0328052
ANXA1 annexin A1 0.0325947
PDIA6 protein disulfide isomerase family A, member 6 0.032586
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.032553
TENM2 teneurin transmembrane protein 2 0.0324998
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.032219
ERRFI1 ERBB receptor feedback inhibitor 1 0.0321516
PEG10 paternally expressed 10 0.0321363
RIMKLB ribosomal modification protein rimK-like family member B 0.0320685
GOLIM4 golgi integral membrane protein 4 0.0318683
DSCAM Down syndrome cell adhesion molecule 0.0317259
NCOR2 nuclear receptor corepressor 2 0.0316581
MYO10 myosin X 0.0316513
LDHA lactate dehydrogenase A 0.0316291
GPHN gephyrin 0.0316133
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0306208
SLIT2 slit homolog 2 (Drosophila) 0.0301065
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.029889
CANX calnexin 0.029743
CSDE1 cold shock domain containing E1, RNA-binding 0.0296287
NRDC nardilysin convertase 0.0293972
RAD51B RAD51 paralog B 0.02898
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0285732
LRRC4C leucine rich repeat containing 4C 0.0283938
RPS2 ribosomal protein S2 0.028388
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0283519
TM7SF3 transmembrane 7 superfamily member 3 0.0281208
JMJD1C jumonji domain containing 1C 0.028109
MDN1 MDN1, midasin homolog (yeast) 0.0272327
USP9X ubiquitin specific peptidase 9, X-linked 0.0271591
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0270307
WNK1 WNK lysine deficient protein kinase 1 0.0266051
GPNMB glycoprotein (transmembrane) nmb 0.0265873
CDH19 cadherin 19, type 2 0.0265055
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0264843
PGK1 phosphoglycerate kinase 1 0.0264073
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0263621
PDIA4 protein disulfide isomerase family A, member 4 0.0263522
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0258341

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0980862
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0669312
FOXP2 forkhead box P2 -0.0657745
USP3 ubiquitin specific peptidase 3 -0.0651762
TSC22D2 TSC22 domain family, member 2 -0.0595227
RBM25 RNA binding motif protein 25 -0.0580104
PTMA prothymosin, alpha -0.0536417
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.050919
ZFAND3 zinc finger, AN1-type domain 3 -0.0480861
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0476231
MRPS30 mitochondrial ribosomal protein S30 -0.0470765
CENPE centromere protein E, 312kDa -0.0465567
RTN4 reticulon 4 -0.0461124
SPAG9 sperm associated antigen 9 -0.0456855
PFN1 profilin 1 -0.0452833
RPS27A ribosomal protein S27a -0.0450342
CAVIN1 caveolae associated protein 1 -0.0446608
STRN3 striatin, calmodulin binding protein 3 -0.0443042
WSB1 WD repeat and SOCS box containing 1 -0.0436529
ACTG1 actin gamma 1 -0.0422679
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0420588
ZNF292 zinc finger protein 292 -0.0410464
RAB7A RAB7A, member RAS oncogene family -0.0407796
GNAS GNAS complex locus -0.0406874
RPS16 ribosomal protein S16 -0.0400304
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0397702
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0395221
HMGB1 high mobility group box 1 -0.0393328
ADAM9 ADAM metallopeptidase domain 9 -0.0387153
MTF2 metal response element binding transcription factor 2 -0.0385955
FBXO11 F-box protein 11 -0.0377285
CXADR coxsackie virus and adenovirus receptor -0.0369171
KIF4A kinesin family member 4A -0.036784
RPLP1 ribosomal protein, large, P1 -0.0366731
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0363367
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0361432
PUM1 pumilio RNA-binding family member 1 -0.0359998
TOP2A topoisomerase (DNA) II alpha 170kDa -0.035721
RLF rearranged L-myc fusion -0.0356005
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0354949
BBX bobby sox homolog (Drosophila) -0.0354587
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0352088
TXNRD1 thioredoxin reductase 1 -0.0348739
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0347356
WDR43 WD repeat domain 43 -0.0347351
COG5 component of oligomeric golgi complex 5 -0.0347074
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0340516
RPL35A ribosomal protein L35a -0.0333998
ZFPM2 zinc finger protein, FOG family member 2 -0.033241
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0331923
RPS21 ribosomal protein S21 -0.0331693
H1-0 H1.0 linker histone -0.033097
MCTP1 multiple C2 domains, transmembrane 1 -0.0329723
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0325333
ATP5F1B ATP synthase F1 subunit beta -0.0323867
BRWD1 bromodomain and WD repeat domain containing 1 -0.031987
TTK TTK protein kinase -0.0318357
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0315383
EMP1 epithelial membrane protein 1 -0.0314064
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0313076
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0310379
DEK DEK proto-oncogene -0.0310379
TMEM123 transmembrane protein 123 -0.0304604
USP12 ubiquitin specific peptidase 12 -0.0303491
MDK midkine (neurite growth-promoting factor 2) -0.030239
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0302261
ZNF385D zinc finger protein 385D -0.0300184
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0297588
RBM39 RNA binding motif protein 39 -0.0295006
FNDC3A fibronectin type III domain containing 3A -0.0292243
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0290546
AK1 adenylate kinase 1 -0.0288864
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0287776
RPS24 ribosomal protein S24 -0.0287503
SHROOM3 shroom family member 3 -0.0286463
RAD21 RAD21 homolog (S. pombe) -0.0276343
RPS13 ribosomal protein S13 -0.0276293
KPNB1 karyopherin (importin) beta 1 -0.0274749
DST dystonin -0.0273428
ZBTB35 zinc finger and BTB domain containing 35 -0.0272233
TBC1D12 TBC1 domain family, member 12 -0.0271243
CKAP2 cytoskeleton associated protein 2 -0.0270711
ASTN2 astrotactin 2 -0.0270662
ASXL1 additional sex combs like transcriptional regulator 1 -0.0270508
ECT2 epithelial cell transforming 2 -0.0268784
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 -0.0267851
BIRC6 baculoviral IAP repeat containing 6 -0.0266485
RHEB Ras homolog enriched in brain -0.0266202
SRSF11 serine/arginine-rich splicing factor 11 -0.0265497
ZNF207 zinc finger protein 207 -0.0265145
PDGFC platelet derived growth factor C -0.0264611
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0264423
ENAH enabled homolog (Drosophila) -0.026282
LATS2 large tumor suppressor kinase 2 -0.0261519
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0260851
ANK2 ankyrin 2, neuronal -0.0260225
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0259482
AGTPBP1 ATP/GTP binding protein 1 -0.0259354
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0259137
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0259129