Dabrafenib_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dabrafenib perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dabrafenib_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.145801
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.134468
VIM vimentin 0.132689
PALM2AKAP2 PALM2 and AKAP2 fusion 0.125897
AKAP12 A kinase (PRKA) anchor protein 12 0.121833
CD44 CD44 molecule (Indian blood group) 0.115638
MACF1 microtubule-actin crosslinking factor 1 0.0994365
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0969456
THSD4 thrombospondin, type I, domain containing 4 0.0939074
FMNL2 formin-like 2 0.0907464
ANGPTL4 angiopoietin-like 4 0.0863353
IGFBP3 insulin-like growth factor binding protein 3 0.0804032
BIRC3 baculoviral IAP repeat containing 3 0.0763372
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.07397
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0720695
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0718181
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0709614
ZSWIM6 zinc finger, SWIM-type containing 6 0.0706673
ASPH aspartate beta-hydroxylase 0.0691155
TM4SF1 transmembrane 4 L six family member 1 0.0667105
LDHA lactate dehydrogenase A 0.0637171
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0636253
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0630307
SQSTM1 sequestosome 1 0.0615906
MCL1 myeloid cell leukemia 1 0.0599711
SMAD3 SMAD family member 3 0.059062
BASP1 brain abundant, membrane attached signal protein 1 0.0589556
ERRFI1 ERBB receptor feedback inhibitor 1 0.058837
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0583393
MSN moesin 0.0566099
FLNA filamin A, alpha 0.0556326
HOOK2 hook microtubule-tethering protein 2 0.0549577
SOD2 superoxide dismutase 2, mitochondrial 0.0549328
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.054556
HSPA8 heat shock 70kDa protein 8 0.0539387
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0533368
APLP2 amyloid beta (A4) precursor-like protein 2 0.0515562
MYH9 myosin, heavy chain 9, non-muscle 0.0515194
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0508998
BHLHE40 basic helix-loop-helix family, member e40 0.0506554
ANXA1 annexin A1 0.0492623
MYO10 myosin X 0.0492582
ANXA2 annexin A2 0.0488703
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0484203
ANTXR2 anthrax toxin receptor 2 0.0477906
COG5 component of oligomeric golgi complex 5 0.0475811
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0471819
IQGAP1 IQ motif containing GTPase activating protein 1 0.0464946
RPL19 ribosomal protein L19 0.0463704
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0460281
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0454468
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0453834
TIMP1 TIMP metallopeptidase inhibitor 1 0.044715
MT2A metallothionein 2A 0.0442895
SVIL supervillin 0.0438996
PYGL phosphorylase, glycogen, liver 0.0435083
CALR calreticulin 0.0428204
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0413846
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0411793
TUT7 terminal uridylyl transferase 7 0.0410702
DSCAM Down syndrome cell adhesion molecule 0.0407418
TMSB10 thymosin beta 10 0.0401715
MMP10 matrix metallopeptidase 10 0.0400298
ELL2 elongation factor, RNA polymerase II, 2 0.039371
MAP2K1 mitogen-activated protein kinase kinase 1 0.0393033
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0387189
PLEC plectin 0.0381403
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.037773
NUMA1 nuclear mitotic apparatus protein 1 0.0377011
CHD1 chromodomain helicase DNA binding protein 1 0.037539
TNIP1 TNFAIP3 interacting protein 1 0.0373224
CSNK1A1 casein kinase 1, alpha 1 0.0372028
MYO9B myosin IXB 0.0369359
B2M beta-2-microglobulin 0.0367441
DOCK4 dedicator of cytokinesis 4 0.0353114
NAP1L1 nucleosome assembly protein 1-like 1 0.034942
DUSP6 dual specificity phosphatase 6 0.0347531
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0347507
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0347436
SETX senataxin 0.0339467
ENO1 enolase 1, (alpha) 0.0338923
HBEGF heparin-binding EGF-like growth factor 0.0338759
IRAK2 interleukin-1 receptor-associated kinase 2 0.0336074
CTTN cortactin 0.033376
RPS12 ribosomal protein S12 0.0331763
EEF2 eukaryotic translation elongation factor 2 0.0330163
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0328803
CANX calnexin 0.0328424
GOLGB1 golgin B1 0.0322454
ACTN1 actinin, alpha 1 0.0321042
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0320211
AKAP13 A kinase (PRKA) anchor protein 13 0.0318395
ARRDC3 arrestin domain containing 3 0.03172
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0316429
RPS17 ribosomal protein S17 0.031223
SDC4 syndecan 4 0.0310561
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0309367
NT5E 5'-nucleotidase, ecto (CD73) 0.0308242
LAMB1 laminin, beta 1 0.0306959
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.030381

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.253184
TAS2R14 taste receptor, type 2, member 14 -0.0665041
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.042016
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0414416
RBM39 RNA binding motif protein 39 -0.0397213
IL1RAP interleukin 1 receptor accessory protein -0.0371157
SNX14 sorting nexin 14 -0.0354804
FUS FUS RNA binding protein -0.0346833
DPYD dihydropyrimidine dehydrogenase -0.0322661
NAV2 neuron navigator 2 -0.0314833
HMGA2 high mobility group AT-hook 2 -0.0312462
PTPRK protein tyrosine phosphatase, receptor type, K -0.0311373
WSB1 WD repeat and SOCS box containing 1 -0.0302788
RAD51B RAD51 paralog B -0.0288761
APOLD1 apolipoprotein L domain containing 1 -0.0283621
SAMD4A sterile alpha motif domain containing 4A -0.0283473
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0279644
ARMH4 armadillo like helical domain containing 4 -0.0269229
EGR1 early growth response 1 -0.0262688
DLG1 discs, large homolog 1 (Drosophila) -0.026263
SMC4 structural maintenance of chromosomes 4 -0.0261633
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0258512
GCC2 GRIP and coiled-coil domain containing 2 -0.0254052
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0253138
ZNF609 zinc finger protein 609 -0.0248337
CENPE centromere protein E, 312kDa -0.0242043
COL5A1 collagen, type V, alpha 1 -0.0239679
ATXN1 ataxin 1 -0.0235408
BLTP1 bridge-like lipid transfer protein family member 1 -0.0228773
SCAPER S-phase cyclin A-associated protein in the ER -0.0225639
NSD2 nuclear receptor binding SET domain protein 2 -0.0223796
VGLL4 vestigial-like family member 4 -0.0222928
SCGB2B2 secretoglobin, family 2B, member 2 -0.022037
SMYD3 SET and MYND domain containing 3 -0.0219226
TRPC1 transient receptor potential cation channel, subfamily C, member 1 -0.0219016
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0217783
PFN1 profilin 1 -0.0217778
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0217578
MYOF myoferlin -0.0216618
VCL vinculin -0.0215076
CENPP centromere protein P -0.0209657
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 -0.0204258
NUCB2 nucleobindin 2 -0.0202397
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0201918
ZBTB1 zinc finger and BTB domain containing 1 -0.0201774
IGF1R insulin-like growth factor 1 receptor -0.0199501
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0198746
PRH1 proline-rich protein HaeIII subfamily 1 -0.0197845
ANLN anillin, actin binding protein -0.0196551
DYNLRB1 dynein, light chain, roadblock-type 1 -0.0195895
TUT4 terminal uridylyl transferase 4 -0.0195748
IGF2 insulin-like growth factor 2 -0.0193442
RPLP1 ribosomal protein, large, P1 -0.019286
MSI2 musashi RNA-binding protein 2 -0.0191633
DENND5B DENN/MADD domain containing 5B -0.0191458
IGFBP4 insulin-like growth factor binding protein 4 -0.0190211
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0188276
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0187984
CKAP5 cytoskeleton associated protein 5 -0.0187208
SYCP2 synaptonemal complex protein 2 -0.0186787
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0186411
TIMP2 TIMP metallopeptidase inhibitor 2 -0.018499
LAMA5 laminin, alpha 5 -0.0184704
MTPN myotrophin -0.0183271
EFNA5 ephrin-A5 -0.0183265
PCED1B PC-esterase domain containing 1B -0.018232
SEPTIN7 septin 7 -0.0181376
S100A6 S100 calcium binding protein A6 -0.018114
CCNI cyclin I -0.0180361
ATXN2 ataxin 2 -0.0179844
TTC19 tetratricopeptide repeat domain 19 -0.0179339
ECT2 epithelial cell transforming 2 -0.0178916
CDK14 cyclin-dependent kinase 14 -0.0178462
FNIP1 folliculin interacting protein 1 -0.0177623
BCAS3 breast carcinoma amplified sequence 3 -0.0177595
BICRAL BICRA like chromatin remodeling complex associated protein -0.0177104
WDR45B WD repeat domain 45B -0.0177058
HMGB1 high mobility group box 1 -0.0176047
RPS21 ribosomal protein S21 -0.0173278
SPDL1 spindle apparatus coiled-coil protein 1 -0.0172657
DEK DEK proto-oncogene -0.0172076
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.017046
USO1 USO1 vesicle transport factor -0.0170322
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0170296
PTPRM protein tyrosine phosphatase, receptor type, M -0.0168629
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0168581
SCARB2 scavenger receptor class B, member 2 -0.016757
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0167437
TPX2 TPX2, microtubule-associated -0.0167218
DCAF7 DDB1 and CUL4 associated factor 7 -0.0166853
UBE3A ubiquitin protein ligase E3A -0.0166444
SP4 Sp4 transcription factor -0.0166429
TP53 tumor protein p53 -0.016579
KDM5A lysine (K)-specific demethylase 5A -0.0164534
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0163331
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 -0.0162835
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0162182
RFC3 replication factor C (activator 1) 3, 38kDa -0.0161839
PRR11 proline rich 11 -0.0160833
PRELID2 PRELI domain containing 2 -0.0160563