Daidzin_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Daidzin perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Daidzin_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAM13A family with sequence similarity 13, member A 0.129761
MT2A metallothionein 2A 0.0889651
ARRDC3 arrestin domain containing 3 0.0678374
PDE8A phosphodiesterase 8A 0.0670483
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0658231
THSD4 thrombospondin, type I, domain containing 4 0.0656702
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0616978
MKI67 marker of proliferation Ki-67 0.0586257
PDE4D phosphodiesterase 4D, cAMP-specific 0.0578268
FNDC3B fibronectin type III domain containing 3B 0.0543707
LAMC2 laminin, gamma 2 0.0523099
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0498194
GNPDA1 glucosamine-6-phosphate deaminase 1 0.04879
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0459927
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0454246
UBA6 ubiquitin-like modifier activating enzyme 6 0.0453482
NGLY1 N-glycanase 1 0.0446641
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0444255
LMO7 LIM domain 7 0.0435853
AKAP12 A kinase (PRKA) anchor protein 12 0.0432879
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0424136
SOD2 superoxide dismutase 2, mitochondrial 0.0419853
ELL2 elongation factor, RNA polymerase II, 2 0.0407704
KMT2E lysine (K)-specific methyltransferase 2E 0.0396088
CD163L1 CD163 molecule-like 1 0.0379259
GOLGA4 golgin A4 0.0377675
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0375485
SLMAP sarcolemma associated protein 0.0374142
MT1X metallothionein 1X 0.0373925
RICTOR RPTOR independent companion of MTOR, complex 2 0.0366039
MACF1 microtubule-actin crosslinking factor 1 0.0365434
ANKRD12 ankyrin repeat domain 12 0.0361951
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0359148
RAB27B RAB27B, member RAS oncogene family 0.034777
CEMIP cell migration inducing protein, hyaluronan binding 0.0347365
ADAM17 ADAM metallopeptidase domain 17 0.0339749
TPD52 tumor protein D52 0.0333654
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0326929
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.03237
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0318211
RPS6 ribosomal protein S6 0.031178
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0310951
SREBF2 sterol regulatory element binding transcription factor 2 0.0310854
SETD5 SET domain containing 5 0.0309315
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0305021
MED13L mediator complex subunit 13-like 0.0290189
KMT2C lysine (K)-specific methyltransferase 2C 0.0285517
HELZ helicase with zinc finger 0.0284515
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.027772
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0270714
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0265233
STC1 stanniocalcin 1 0.0263947
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0263206
ATAD2B ATPase family, AAA domain containing 2B 0.0260802
OGA O-GlcNAcase 0.0257849
RPS8 ribosomal protein S8 0.0257753
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0257621
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0256338
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0251761
USP47 ubiquitin specific peptidase 47 0.0250126
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0249561
NAMPT nicotinamide phosphoribosyltransferase 0.0248219
ATP13A3 ATPase type 13A3 0.0245844
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.02444
PM20D1 peptidase M20 domain containing 1 0.0243338
PTPRM protein tyrosine phosphatase, receptor type, M 0.0242326
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0236781
RPL12 ribosomal protein L12 0.0236135
SERF2 small EDRK-rich factor 2 0.0233747
MSN moesin 0.0232795
PUM2 pumilio RNA-binding family member 2 0.0230738
TPM3 tropomyosin 3 0.0227978
BRWD3 bromodomain and WD repeat domain containing 3 0.0223752
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.022366
MYH9 myosin, heavy chain 9, non-muscle 0.0220794
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0220608
PTBP2 polypyrimidine tract binding protein 2 0.0219367
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0219058
RPS2 ribosomal protein S2 0.0217956
S100A9 S100 calcium binding protein A9 0.0217203
RNF145 ring finger protein 145 0.0215022
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0213815
FBXL5 F-box and leucine-rich repeat protein 5 0.0213546
TSC22D2 TSC22 domain family, member 2 0.0213403
PHF21A PHD finger protein 21A 0.0212935
PTK2 protein tyrosine kinase 2 0.0212284
ARHGAP21 Rho GTPase activating protein 21 0.0211567
SEC61G Sec61 gamma subunit 0.0210858
TNIP1 TNFAIP3 interacting protein 1 0.0209408
ANO6 anoctamin 6 0.0208415
ARHGAP32 Rho GTPase activating protein 32 0.0207847
CYLD cylindromatosis (turban tumor syndrome) 0.0205837
SCAF11 SR-related CTD-associated factor 11 0.020582
KRT18 keratin 18, type I 0.0205142
KDM5B lysine (K)-specific demethylase 5B 0.0204652
TRA2A transformer 2 alpha homolog (Drosophila) 0.0203504
S100A6 S100 calcium binding protein A6 0.0203136
TMEM167A transmembrane protein 167A 0.0202822
NPTN neuroplastin 0.0201685
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0201607

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.252504
EGFR epidermal growth factor receptor -0.21367
TXNRD1 thioredoxin reductase 1 -0.168361
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.153906
LOC112694756 uncharaterized LOC112694756 -0.144108
PKM pyruvate kinase, muscle -0.0927441
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0841002
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0812339
UBC ubiquitin C -0.0796406
INTS6 integrator complex subunit 6 -0.0790072
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0783217
LDHA lactate dehydrogenase A -0.0762863
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0710209
EGR1 early growth response 1 -0.0702703
FTH1 ferritin, heavy polypeptide 1 -0.0677376
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0645371
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0640127
FTL ferritin, light polypeptide -0.0637802
HDLBP high density lipoprotein binding protein -0.0614705
AGO2 argonaute RISC catalytic component 2 -0.0609689
RPS24 ribosomal protein S24 -0.0555279
RPLP1 ribosomal protein, large, P1 -0.0552187
PDIA3 protein disulfide isomerase family A, member 3 -0.0548997
CAV1 caveolin 1, caveolae protein, 22kDa -0.0544096
SRRM2 serine/arginine repetitive matrix 2 -0.0538077
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0533268
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.051712
TMSB10 thymosin beta 10 -0.0514344
ACTG1 actin gamma 1 -0.0503286
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.049328
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.045773
SPDYA speedy/RINGO cell cycle regulator family member A -0.0454366
ARF1 ADP-ribosylation factor 1 -0.0454127
USP34 ubiquitin specific peptidase 34 -0.0421457
RPL31 ribosomal protein L31 -0.041753
NABP1 nucleic acid binding protein 1 -0.0412531
CANX calnexin -0.0401741
RPL4 ribosomal protein L4 -0.0399552
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0393504
EIF1 eukaryotic translation initiation factor 1 -0.0376526
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0368862
RPS25 ribosomal protein S25 -0.0360152
IGFBP3 insulin-like growth factor binding protein 3 -0.0359792
AKR1C1 aldo-keto reductase family 1, member C1 -0.0348383
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0348296
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0343182
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0342707
EEF2 eukaryotic translation elongation factor 2 -0.0340907
TES testin LIM domain protein -0.0338929
ABLIM1 actin binding LIM protein 1 -0.033466
BTG1 B-cell translocation gene 1, anti-proliferative -0.0330085
ANXA2 annexin A2 -0.0329477
HOMER1 homer scaffolding protein 1 -0.0327134
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0321362
CST3 cystatin C -0.0316428
LRP12 low density lipoprotein receptor-related protein 12 -0.031635
MYOF myoferlin -0.0314364
AGR2 anterior gradient 2 -0.0304952
ANKRD10 ankyrin repeat domain 10 -0.0304511
MORF4L2 mortality factor 4 like 2 -0.0295912
VDAC1 voltage-dependent anion channel 1 -0.0291299
SRPRA SRP receptor subunit alpha -0.0282262
GM2A GM2 ganglioside activator -0.0280573
NFE2L2 nuclear factor, erythroid 2-like 2 -0.027817
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0278062
SP100 SP100 nuclear antigen -0.0277643
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0275855
TMCO3 transmembrane and coiled-coil domains 3 -0.0267424
MYO1E myosin IE -0.0266576
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.026447
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0263319
TKT transketolase -0.0262996
PCBP2 poly(rC) binding protein 2 -0.0262721
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0259381
ZC3H11A zinc finger CCCH-type containing 11A -0.0257072
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0256756
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.025514
RNF213 ring finger protein 213 -0.0249063
PGK1 phosphoglycerate kinase 1 -0.0247271
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0238846
MCL1 myeloid cell leukemia 1 -0.0237321
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0236749
HYOU1 hypoxia up-regulated 1 -0.0236582
CDCP1 CUB domain containing protein 1 -0.0235444
UGDH UDP-glucose 6-dehydrogenase -0.0234608
ENO1 enolase 1, (alpha) -0.0231157
RAB7A RAB7A, member RAS oncogene family -0.0221512
ZNF207 zinc finger protein 207 -0.0220542
TMEM165 transmembrane protein 165 -0.0219651
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0219446
GRAMD1B GRAM domain containing 1B -0.0217316
LMAN1 lectin, mannose-binding, 1 -0.0217066
CCND1 cyclin D1 -0.0216998
CSNK1E casein kinase 1, epsilon -0.0216392
HMGA1 high mobility group AT-hook 1 -0.0214409
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.021388
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.021351
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.0213143
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0213011
SCFD1 sec1 family domain containing 1 -0.0212295