Daidzin_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Daidzin perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Daidzin_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.112704
AKAP12 A kinase (PRKA) anchor protein 12 0.10109
HSPA8 heat shock 70kDa protein 8 0.0763014
APLP2 amyloid beta (A4) precursor-like protein 2 0.0633965
UBASH3B ubiquitin associated and SH3 domain containing B 0.062715
FMNL2 formin-like 2 0.0588594
MACF1 microtubule-actin crosslinking factor 1 0.0558253
PDIA6 protein disulfide isomerase family A, member 6 0.0555178
SAMD4A sterile alpha motif domain containing 4A 0.0553454
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0539434
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0524401
TPD52 tumor protein D52 0.0515434
EEF2 eukaryotic translation elongation factor 2 0.0497006
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0487341
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0484831
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0472732
TRIO trio Rho guanine nucleotide exchange factor 0.0469127
FLNB filamin B, beta 0.0464845
DST dystonin 0.0437873
TPM3 tropomyosin 3 0.0429767
MYH9 myosin, heavy chain 9, non-muscle 0.0416788
RPL37A ribosomal protein L37a 0.0413061
MKI67 marker of proliferation Ki-67 0.0395657
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0371415
ELL2 elongation factor, RNA polymerase II, 2 0.0369722
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0346821
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0339183
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0327208
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0326779
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0322098
PTPRM protein tyrosine phosphatase, receptor type, M 0.0315986
VEGFA vascular endothelial growth factor A 0.0313623
YTHDC1 YTH domain containing 1 0.031046
SPAG5 sperm associated antigen 5 0.0310187
SFTPA2 surfactant protein A2 0.0307682
EIF4B eukaryotic translation initiation factor 4B 0.03066
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0305876
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0303575
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0301584
RPL3 ribosomal protein L3 0.0295403
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0294589
KMT2C lysine (K)-specific methyltransferase 2C 0.0293433
CALR calreticulin 0.0292329
NCEH1 neutral cholesterol ester hydrolase 1 0.0292062
SNX14 sorting nexin 14 0.0290671
RPS2 ribosomal protein S2 0.0288576
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0282996
MSN moesin 0.0282279
GOLGA4 golgin A4 0.0281829
AKAP13 A kinase (PRKA) anchor protein 13 0.0281389
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.027971
CASC3 cancer susceptibility candidate 3 0.0279074
LPP LIM domain containing preferred translocation partner in lipoma 0.0275397
CFLAR CASP8 and FADD-like apoptosis regulator 0.0275084
RPS18 ribosomal protein S18 0.0273192
LAMB1 laminin, beta 1 0.0266349
SFPQ splicing factor proline/glutamine-rich 0.0266197
SMAD3 SMAD family member 3 0.0266109
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0262976
PNN pinin, desmosome associated protein 0.0261687
SBF2 SET binding factor 2 0.0261637
WAC WW domain containing adaptor with coiled-coil 0.026106
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0260258
EEF1G eukaryotic translation elongation factor 1 gamma 0.0257635
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.025706
ARHGAP21 Rho GTPase activating protein 21 0.0240011
DNMBP dynamin binding protein 0.0238463
UBC ubiquitin C 0.0237634
FDPS farnesyl diphosphate synthase 0.0237269
SREBF2 sterol regulatory element binding transcription factor 2 0.0235545
PTMA prothymosin, alpha 0.0234087
BUB3 BUB3 mitotic checkpoint protein 0.0234028
BCLAF1 BCL2-associated transcription factor 1 0.0231362
CCNY cyclin Y 0.0228349
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.0227815
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.022545
KIAA0319 KIAA0319 0.0224706
CTTN cortactin 0.0221954
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0219999
CFDP1 craniofacial development protein 1 0.0219768
PTPRF protein tyrosine phosphatase, receptor type, F 0.0219379
RCOR1 REST corepressor 1 0.0218397
PABPN1 poly(A) binding protein, nuclear 1 0.0217948
APP amyloid beta (A4) precursor protein 0.0217217
RPS3 ribosomal protein S3 0.021363
UBAP2L ubiquitin associated protein 2-like 0.0213267
RPS6 ribosomal protein S6 0.0210124
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0208943
MEAK7 MTOR associated protein, eak-7 homolog 0.0208109
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0207902
ANXA1 annexin A1 0.0206461
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0204476
CMIP c-Maf inducing protein 0.0203446
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0202886
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0202594
ADAM17 ADAM metallopeptidase domain 17 0.0201622
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0199083
IQGAP3 IQ motif containing GTPase activating protein 3 0.0197915
CKAP5 cytoskeleton associated protein 5 0.0197466
RAB6A RAB6A, member RAS oncogene family 0.0196098

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.201672
FTL ferritin, light polypeptide -0.198365
VIM vimentin -0.182354
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.140118
TXNRD1 thioredoxin reductase 1 -0.132911
PM20D1 peptidase M20 domain containing 1 -0.126938
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.098547
RPL4 ribosomal protein L4 -0.0849273
RPLP1 ribosomal protein, large, P1 -0.0792704
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0766509
POTEF POTE ankyrin domain family, member F -0.0717452
EGR1 early growth response 1 -0.0676048
HDAC9 histone deacetylase 9 -0.065937
IER3 immediate early response 3 -0.0655963
OSMR oncostatin M receptor -0.0654177
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0640942
RPL19 ribosomal protein L19 -0.0639499
CXCL8 chemokine (C-X-C motif) ligand 8 -0.062253
RPS24 ribosomal protein S24 -0.0607564
RPL35A ribosomal protein L35a -0.0600995
LOC112694756 uncharaterized LOC112694756 -0.0599979
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0585573
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0578746
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0562296
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.055752
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0555054
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0549251
MORF4L2 mortality factor 4 like 2 -0.0539184
S100A6 S100 calcium binding protein A6 -0.0524741
RHOA ras homolog family member A -0.0500455
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0490317
ACTG1 actin gamma 1 -0.0485117
RPS20 ribosomal protein S20 -0.048157
MT2A metallothionein 2A -0.0462294
PDE4D phosphodiesterase 4D, cAMP-specific -0.0453539
FTH1 ferritin, heavy polypeptide 1 -0.044487
BIRC3 baculoviral IAP repeat containing 3 -0.0431246
RBM39 RNA binding motif protein 39 -0.0429884
PDIA3 protein disulfide isomerase family A, member 3 -0.0427964
PCBP2 poly(rC) binding protein 2 -0.0427763
SDC4 syndecan 4 -0.0415527
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0415105
VDAC1 voltage-dependent anion channel 1 -0.0396888
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0391691
RPLP0 ribosomal protein, large, P0 -0.0388082
LOC102724023 ES1 protein homolog, mitochondrial -0.0387954
ZNF207 zinc finger protein 207 -0.0386599
CAVIN1 caveolae associated protein 1 -0.0384973
LDHA lactate dehydrogenase A -0.0383443
MYL12B myosin, light chain 12B, regulatory -0.0380124
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0379584
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0376092
MORF4L1 mortality factor 4 like 1 -0.0374526
ANXA2 annexin A2 -0.0374478
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0374022
BICC1 BicC family RNA binding protein 1 -0.0373788
DENND4A DENN/MADD domain containing 4A -0.0364036
RAB1A RAB1A, member RAS oncogene family -0.0362904
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0358058
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.035773
IGFBP3 insulin-like growth factor binding protein 3 -0.0356565
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0352763
THSD4 thrombospondin, type I, domain containing 4 -0.0351484
AFF4 AF4/FMR2 family, member 4 -0.0346145
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0338152
USP3 ubiquitin specific peptidase 3 -0.0338096
GNAS GNAS complex locus -0.0335421
RPS5 ribosomal protein S5 -0.0331465
PKM pyruvate kinase, muscle -0.0331053
NCOA7 nuclear receptor coactivator 7 -0.0328372
RPL23 ribosomal protein L23 -0.0324809
TPM4 tropomyosin 4 -0.032124
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like -0.0319791
FNDC3B fibronectin type III domain containing 3B -0.0316895
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0313658
GARS1 glycyl-tRNA synthetase 1 -0.0313616
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0310774
IGF1R insulin-like growth factor 1 receptor -0.0303094
ERBIN erbb2 interacting protein -0.0296263
RPS16 ribosomal protein S16 -0.0290588
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0289194
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0285282
NABP1 nucleic acid binding protein 1 -0.0284394
EIF1 eukaryotic translation initiation factor 1 -0.0281576
WWOX WW domain containing oxidoreductase -0.0281255
OLA1 Obg-like ATPase 1 -0.028123
NPR2 natriuretic peptide receptor 2 -0.027851
BTBD7 BTB (POZ) domain containing 7 -0.0278395
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0276675
NOP58 NOP58 ribonucleoprotein -0.0271625
ZNF804A zinc finger protein 804A -0.0271106
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0270361
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0269282
YBX3 Y box binding protein 3 -0.0267825
COTL1 coactosin-like F-actin binding protein 1 -0.0267723
AGO2 argonaute RISC catalytic component 2 -0.0265997
PERP PERP, TP53 apoptosis effector -0.0265407
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0263777
WIPF2 WAS/WASL interacting protein family, member 2 -0.0262817
SLC38A1 solute carrier family 38, member 1 -0.0262615