Daidzin_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Daidzin perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Daidzin_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ELL2 elongation factor, RNA polymerase II, 2 0.116336
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.107936
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0912997
HOOK2 hook microtubule-tethering protein 2 0.0877553
GOLGA4 golgin A4 0.0876933
INHBA inhibin, beta A 0.078105
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.076894
FAM13A family with sequence similarity 13, member A 0.0764928
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0759244
OGA O-GlcNAcase 0.0722232
NALF1 NALCN channel auxiliary factor 1 0.0696709
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0694317
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0676746
TRIO trio Rho guanine nucleotide exchange factor 0.0673516
DLG1 discs, large homolog 1 (Drosophila) 0.0672879
STC1 stanniocalcin 1 0.0671559
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0657026
CCNY cyclin Y 0.0642322
VEGFA vascular endothelial growth factor A 0.0637265
FNBP1L formin binding protein 1-like 0.0601357
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0585044
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0580674
DST dystonin 0.0569674
ESYT2 extended synaptotagmin-like protein 2 0.0563491
COL6A3 collagen, type VI, alpha 3 0.0553721
SBF2 SET binding factor 2 0.0552638
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0542575
RORA RAR-related orphan receptor A 0.0539495
CAMTA1 calmodulin binding transcription activator 1 0.0523213
FNDC3B fibronectin type III domain containing 3B 0.0517309
YTHDC1 YTH domain containing 1 0.0516009
NGLY1 N-glycanase 1 0.0492105
JARID2 jumonji, AT rich interactive domain 2 0.0490395
ATP13A3 ATPase type 13A3 0.0489465
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0482417
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0470646
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0463189
RPS3 ribosomal protein S3 0.0456317
ZNF654 zinc finger protein 654 0.0453197
GPHN gephyrin 0.045201
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0449753
SENP6 SUMO1/sentrin specific peptidase 6 0.0449537
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0436624
HLA-B major histocompatibility complex, class I, B 0.0430737
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0426141
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0425493
DTNA dystrobrevin, alpha 0.0425257
MYO1B myosin IB 0.042478
RLF rearranged L-myc fusion 0.0422477
NDRG1 N-myc downstream regulated 1 0.042124
UBE2K ubiquitin-conjugating enzyme E2K 0.0418681
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0417657
SOS1 son of sevenless homolog 1 (Drosophila) 0.0416929
COPB1 coatomer protein complex, subunit beta 1 0.0416285
VGLL4 vestigial-like family member 4 0.0416084
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0414235
RB1CC1 RB1-inducible coiled-coil 1 0.0409893
SRSF11 serine/arginine-rich splicing factor 11 0.0409129
USP3 ubiquitin specific peptidase 3 0.0408094
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0405017
ELP2 elongator acetyltransferase complex subunit 2 0.0403823
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0402516
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0401876
FYN FYN proto-oncogene, Src family tyrosine kinase 0.039954
SMAD3 SMAD family member 3 0.0399503
SETD5 SET domain containing 5 0.0391279
MEMO1 mediator of cell motility 1 0.038781
RNMT RNA (guanine-7-) methyltransferase 0.0383607
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0383534
GARS1 glycyl-tRNA synthetase 1 0.0380352
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0379651
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.037577
XPO1 exportin 1 0.0375224
NAV1 neuron navigator 1 0.0373723
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.037284
STAG2 stromal antigen 2 0.0369023
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0366757
SPRED1 sprouty-related, EVH1 domain containing 1 0.0365837
PNISR PNN-interacting serine/arginine-rich protein 0.0365003
CERT1 ceramide transporter 1 0.0362017
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0361599
LCORL ligand dependent nuclear receptor corepressor-like 0.0361189
PRKCA protein kinase C, alpha 0.0350544
IARS1 isoleucyl-tRNA synthetase 1 0.0350179
MACF1 microtubule-actin crosslinking factor 1 0.034554
TTBK2 tau tubulin kinase 2 0.0345179
NSD3 nuclear receptor binding SET domain protein 3 0.0342168
NCKAP1 NCK-associated protein 1 0.0341668
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0340736
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0338942
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0338709
NPAS2 neuronal PAS domain protein 2 0.033658
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0335505
CSDE1 cold shock domain containing E1, RNA-binding 0.0335052
PTEN phosphatase and tensin homolog 0.0331126
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0330919
HIPK2 homeodomain interacting protein kinase 2 0.0330315
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0327915
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0327505
NFE2L2 nuclear factor, erythroid 2-like 2 0.0326202

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.13014
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.128787
FTL ferritin, light polypeptide -0.117976
LMO7 LIM domain 7 -0.117614
MYO1E myosin IE -0.109574
IFIH1 interferon induced with helicase C domain 1 -0.0969202
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0933576
S100A9 S100 calcium binding protein A9 -0.0819918
GRB10 growth factor receptor-bound protein 10 -0.0804327
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0796213
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0782095
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0730316
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0662288
MUC16 mucin 16, cell surface associated -0.0648892
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0646281
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.064416
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0644043
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0636547
KYNU kynureninase -0.0616349
SAMD4A sterile alpha motif domain containing 4A -0.0597043
KRT17 keratin 17, type I -0.0594571
SQSTM1 sequestosome 1 -0.0586184
VIM vimentin -0.0573518
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0571126
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0566278
CEMIP cell migration inducing protein, hyaluronan binding -0.0564466
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0554442
POTEF POTE ankyrin domain family, member F -0.0549913
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0538811
ABHD17C abhydrolase domain containing 17C -0.0535674
ARHGAP5 Rho GTPase activating protein 5 -0.0531784
ATOSA atos homolog A -0.0516912
ANXA1 annexin A1 -0.0507434
OASL 2'-5'-oligoadenylate synthetase-like -0.0500901
FTH1 ferritin, heavy polypeptide 1 -0.0494387
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0493415
KPNB1 karyopherin (importin) beta 1 -0.048032
ANXA2 annexin A2 -0.0477688
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0474516
EGR1 early growth response 1 -0.0470383
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.045774
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.045625
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0447835
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0445774
SLC38A1 solute carrier family 38, member 1 -0.0444095
KTN1 kinectin 1 (kinesin receptor) -0.0437962
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0437824
STK17A serine/threonine kinase 17a -0.0436389
ACTG1 actin gamma 1 -0.0434081
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0431478
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0429371
UBC ubiquitin C -0.0427819
SOX4 SRY (sex determining region Y)-box 4 -0.0424811
BTG1 B-cell translocation gene 1, anti-proliferative -0.0418059
SP100 SP100 nuclear antigen -0.041342
SH3KBP1 SH3-domain kinase binding protein 1 -0.0407276
EZR ezrin -0.0404014
PLAUR plasminogen activator, urokinase receptor -0.039178
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0389755
KIF13B kinesin family member 13B -0.0388475
LAMC2 laminin, gamma 2 -0.0387457
CYTH1 cytohesin 1 -0.0386525
KDM5B lysine (K)-specific demethylase 5B -0.0385623
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0383453
S100A10 S100 calcium binding protein A10 -0.0380587
RPS19 ribosomal protein S19 -0.0379942
RIGI RNA sensor RIG-I -0.0376983
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0371582
AFF4 AF4/FMR2 family, member 4 -0.0368521
NCOA3 nuclear receptor coactivator 3 -0.0367751
SAMD9 sterile alpha motif domain containing 9 -0.0367238
RAB1A RAB1A, member RAS oncogene family -0.0366487
ANTXR2 anthrax toxin receptor 2 -0.035827
EPSTI1 epithelial stromal interaction 1 (breast) -0.0357987
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.03578
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0357781
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.035697
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0356853
MED13 mediator complex subunit 13 -0.0356512
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0355111
CLINT1 clathrin interactor 1 -0.0354833
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0353406
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0351203
MFSD14A major facilitator superfamily domain containing 14A -0.0348101
SLMAP sarcolemma associated protein -0.0346746
ITPRID2 ITPR interacting domain containing 2 -0.0346392
CATSPERB catsper channel auxiliary subunit beta -0.0343569
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0342933
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0341281
RPL23 ribosomal protein L23 -0.0338364
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0338226
PDIA3 protein disulfide isomerase family A, member 3 -0.0337554
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0337531
ZNF609 zinc finger protein 609 -0.0336804
CCDC6 coiled-coil domain containing 6 -0.0336604
FHIT fragile histidine triad -0.0333919
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0333107
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0330542
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0329362
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0324909