Daptomycin_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Daptomycin perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Daptomycin_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.100506
DST dystonin 0.0957572
PTK2 protein tyrosine kinase 2 0.0678745
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0648486
NAMPT nicotinamide phosphoribosyltransferase 0.0638153
BIRC6 baculoviral IAP repeat containing 6 0.0621423
PRELID2 PRELI domain containing 2 0.0568673
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0560774
BBX bobby sox homolog (Drosophila) 0.0533414
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0527662
AREG amphiregulin 0.0503793
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0499154
ESYT2 extended synaptotagmin-like protein 2 0.0493653
GPC6 glypican 6 0.0482174
ANKRD12 ankyrin repeat domain 12 0.0471308
TPR translocated promoter region, nuclear basket protein 0.0468069
KMT2C lysine (K)-specific methyltransferase 2C 0.0466932
SND1 staphylococcal nuclease and tudor domain containing 1 0.0465618
NCKAP1 NCK-associated protein 1 0.0462579
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0457802
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0417403
RTN4 reticulon 4 0.0413897
ANKRD11 ankyrin repeat domain 11 0.0411722
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0410517
AKAP12 A kinase (PRKA) anchor protein 12 0.040232
KTN1 kinectin 1 (kinesin receptor) 0.0401798
SPDYA speedy/RINGO cell cycle regulator family member A 0.0394302
SERINC5 serine incorporator 5 0.0391028
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0374706
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0374483
TM9SF2 transmembrane 9 superfamily member 2 0.0370346
MKI67 marker of proliferation Ki-67 0.0368265
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0365346
OXR1 oxidation resistance 1 0.0363276
TSC22D2 TSC22 domain family, member 2 0.0361728
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.0360766
CENPF centromere protein F, 350/400kDa 0.0360175
SCEL sciellin 0.0358047
ADAM17 ADAM metallopeptidase domain 17 0.0354086
DENND4C DENN/MADD domain containing 4C 0.0352987
ZMYM2 zinc finger, MYM-type 2 0.034817
CHD1L chromodomain helicase DNA binding protein 1-like 0.0346798
TPD52 tumor protein D52 0.0346153
ENO1 enolase 1, (alpha) 0.0343591
MYH9 myosin, heavy chain 9, non-muscle 0.0342997
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0339393
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0338226
NEK7 NIMA-related kinase 7 0.0336311
ITSN1 intersectin 1 (SH3 domain protein) 0.0334339
KDM2A lysine (K)-specific demethylase 2A 0.0334268
EXOC4 exocyst complex component 4 0.0333084
COPA coatomer protein complex, subunit alpha 0.0331552
WDFY2 WD repeat and FYVE domain containing 2 0.0329792
COL5A2 collagen, type V, alpha 2 0.0327636
THRAP3 thyroid hormone receptor associated protein 3 0.0324449
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0323326
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.032324
VMP1 vacuole membrane protein 1 0.0322023
SETD5 SET domain containing 5 0.0317807
PGK1 phosphoglycerate kinase 1 0.0315946
EXT1 exostosin glycosyltransferase 1 0.0315601
AMBRA1 autophagy/beclin-1 regulator 1 0.0315515
PYGL phosphorylase, glycogen, liver 0.0312477
RAB2A RAB2A, member RAS oncogene family 0.0309303
TFG TRK-fused gene 0.0305321
TPM3 tropomyosin 3 0.0303607
SRRM2 serine/arginine repetitive matrix 2 0.0303531
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0299863
CA12 carbonic anhydrase XII 0.029873
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0298585
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0295333
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0295217
APLP2 amyloid beta (A4) precursor-like protein 2 0.0287559
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0285929
SRPK2 SRSF protein kinase 2 0.0284608
TBC1D22A TBC1 domain family, member 22A 0.0284005
N4BP2L2 NEDD4 binding protein 2-like 2 0.0282334
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0281779
GPBP1L1 GC-rich promoter binding protein 1-like 1 0.0281729
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0280759
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.027873
PHF21A PHD finger protein 21A 0.0277728
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0277198
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0276269
UBE3C ubiquitin protein ligase E3C 0.0273503
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0272803
PDE10A phosphodiesterase 10A 0.0271098
FAM168A family with sequence similarity 168, member A 0.0269883
NKTR natural killer cell triggering receptor 0.0268568
AFF1 AF4/FMR2 family, member 1 0.0267553
NCOR1 nuclear receptor corepressor 1 0.0265576
LAMA4 laminin, alpha 4 0.0264417
EPS8 epidermal growth factor receptor pathway substrate 8 0.0264392
OXSR1 oxidative stress responsive 1 0.026303
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.0262677
ZNF654 zinc finger protein 654 0.0262202
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.0260138
TRIO trio Rho guanine nucleotide exchange factor 0.0258641
SMYD3 SET and MYND domain containing 3 0.0258526
CD44 CD44 molecule (Indian blood group) 0.025826

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.180909
BACE2 beta-site APP-cleaving enzyme 2 -0.137737
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.125521
IGF2 insulin-like growth factor 2 -0.108872
ATOSA atos homolog A -0.10231
LAMB3 laminin, beta 3 -0.0983986
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.090018
MT2A metallothionein 2A -0.0882751
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0842082
DSCAM Down syndrome cell adhesion molecule -0.0820085
TMSB10 thymosin beta 10 -0.0729805
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0717585
GRB10 growth factor receptor-bound protein 10 -0.0690243
MUC16 mucin 16, cell surface associated -0.0682953
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0664244
SVIL supervillin -0.0629319
ABHD17C abhydrolase domain containing 17C -0.0590266
RBM47 RNA binding motif protein 47 -0.0583887
PTPRM protein tyrosine phosphatase, receptor type, M -0.0569241
FTL ferritin, light polypeptide -0.056824
KATNBL1 katanin p80 subunit B-like 1 -0.0547328
KYNU kynureninase -0.0537048
IGFBP3 insulin-like growth factor binding protein 3 -0.0527215
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0522398
MYO1E myosin IE -0.0521181
SAMD4A sterile alpha motif domain containing 4A -0.0500852
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0497781
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0495636
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0492608
FBF1 Fas (TNFRSF6) binding factor 1 -0.0477836
MACC1 metastasis associated in colon cancer 1 -0.0472214
IGF1R insulin-like growth factor 1 receptor -0.0471773
ZBTB20 zinc finger and BTB domain containing 20 -0.0468021
DLG1 discs, large homolog 1 (Drosophila) -0.0457882
EGFR epidermal growth factor receptor -0.0455481
SQSTM1 sequestosome 1 -0.0448183
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0430218
RPS16 ribosomal protein S16 -0.0430012
ERBIN erbb2 interacting protein -0.0414832
USP34 ubiquitin specific peptidase 34 -0.0413323
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0408317
EFNA5 ephrin-A5 -0.0407801
CD2AP CD2-associated protein -0.0397278
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0396374
SLC38A1 solute carrier family 38, member 1 -0.0388386
RAB10 RAB10, member RAS oncogene family -0.0387318
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0381029
MEF2A myocyte enhancer factor 2A -0.0379397
LOC112694756 uncharaterized LOC112694756 -0.0378804
ZNF638 zinc finger protein 638 -0.0377026
TXNRD1 thioredoxin reductase 1 -0.0374727
VIM vimentin -0.0373616
EZR ezrin -0.0359767
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6 -0.0357343
PDE4D phosphodiesterase 4D, cAMP-specific -0.0352853
GCC2 GRIP and coiled-coil domain containing 2 -0.0351526
NCOR2 nuclear receptor corepressor 2 -0.0351007
LOXL2 lysyl oxidase-like 2 -0.0346949
OSMR oncostatin M receptor -0.0344977
RAB1A RAB1A, member RAS oncogene family -0.034325
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0340167
C3 complement component 3 -0.0338714
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.033737
CDK13 cyclin-dependent kinase 13 -0.0333355
QSOX1 quiescin Q6 sulfhydryl oxidase 1 -0.0332395
AHNAK AHNAK nucleoprotein -0.0331457
ITCH itchy E3 ubiquitin protein ligase -0.0329006
NPTN neuroplastin -0.0322564
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0320515
DUSP16 dual specificity phosphatase 16 -0.0318445
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0317113
ANTXR2 anthrax toxin receptor 2 -0.0315893
MTUS1 microtubule associated tumor suppressor 1 -0.0315006
STC1 stanniocalcin 1 -0.0310888
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0310281
BPTF bromodomain PHD finger transcription factor -0.0310132
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.0309996
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0300562
KLF6 Kruppel-like factor 6 -0.0300166
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0299755
RPL11 ribosomal protein L11 -0.0295752
FOXO1 forkhead box O1 -0.0294725
KIAA1217 KIAA1217 -0.0291341
TJP1 tight junction protein 1 -0.0291022
SNX6 sorting nexin 6 -0.0290953
ZNF207 zinc finger protein 207 -0.0290168
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0289974
FAM13A family with sequence similarity 13, member A -0.0288502
NPC1 Niemann-Pick disease, type C1 -0.0287551
RPS14 ribosomal protein S14 -0.0281849
VDAC1 voltage-dependent anion channel 1 -0.0281481
TUSC3 tumor suppressor candidate 3 -0.0280795
ITGB4 integrin, beta 4 -0.0276295
MYO5C myosin VC -0.0271237
ZMYND8 zinc finger, MYND-type containing 8 -0.0270321
USP6NL USP6 N-terminal like -0.0268888
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0267707
RPL37A ribosomal protein L37a -0.0266498
RPL31 ribosomal protein L31 -0.0265776
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0264643