Darinaparsin_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.129849
UBC ubiquitin C 0.0859686
MYH9 myosin, heavy chain 9, non-muscle 0.0859279
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0814911
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0796006
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0662875
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0607974
MT2A metallothionein 2A 0.0570173
MACF1 microtubule-actin crosslinking factor 1 0.0525421
TMSB10 thymosin beta 10 0.0522146
FLNA filamin A, alpha 0.0517052
TPM3 tropomyosin 3 0.0515599
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0502655
PTMA prothymosin, alpha 0.0495995
ASPH aspartate beta-hydroxylase 0.0495505
ENO1 enolase 1, (alpha) 0.0492196
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0482102
CALR calreticulin 0.0472986
SQSTM1 sequestosome 1 0.0465827
COL3A1 collagen, type III, alpha 1 0.0459402
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0456252
NAP1L1 nucleosome assembly protein 1-like 1 0.0449719
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0445607
POTEF POTE ankyrin domain family, member F 0.04416
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0436582
APP amyloid beta (A4) precursor protein 0.0421203
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0413376
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0409542
PKM pyruvate kinase, muscle 0.0406974
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0406643
TMSB4X thymosin beta 4, X-linked 0.040203
MSN moesin 0.0401474
MBNL1 muscleblind-like splicing regulator 1 0.0395879
LDHA lactate dehydrogenase A 0.0388874
RHOBTB3 Rho-related BTB domain containing 3 0.0382915
VIM vimentin 0.0379134
AHNAK AHNAK nucleoprotein 0.0373423
LMNA lamin A/C 0.0372314
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0369752
EEF2 eukaryotic translation elongation factor 2 0.0365231
SET SET nuclear proto-oncogene 0.0361997
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0361692
CENPF centromere protein F, 350/400kDa 0.0360134
TRIO trio Rho guanine nucleotide exchange factor 0.0351931
NAV2 neuron navigator 2 0.0351413
SMAD3 SMAD family member 3 0.0346026
CDH13 cadherin 13 0.0345889
PLEC plectin 0.0343498
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0343049
VCL vinculin 0.033934
ZSWIM6 zinc finger, SWIM-type containing 6 0.0339076
PRRC2C proline-rich coiled-coil 2C 0.0338671
SP100 SP100 nuclear antigen 0.0331583
RIGI RNA sensor RIG-I 0.0328098
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0326468
B2M beta-2-microglobulin 0.0312205
FSTL1 follistatin-like 1 0.0311457
CD44 CD44 molecule (Indian blood group) 0.030716
RPS27A ribosomal protein S27a 0.0303404
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.030281
RRM2 ribonucleotide reductase M2 0.0300807
PLAT plasminogen activator, tissue 0.0296514
HDAC9 histone deacetylase 9 0.0292616
SON SON DNA binding protein 0.0286486
INTS6 integrator complex subunit 6 0.0285738
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0285469
MCL1 myeloid cell leukemia 1 0.0283963
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0279822
RNF213 ring finger protein 213 0.0279735
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0279578
MPRIP myosin phosphatase Rho interacting protein 0.0279315
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0273261
DSPP dentin sialophosphoprotein 0.0272624
PBX3 pre-B-cell leukemia homeobox 3 0.0270555
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.027053
ANKRD11 ankyrin repeat domain 11 0.027046
NFE2L1 nuclear factor, erythroid 2-like 1 0.0266846
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0264574
TNIP1 TNFAIP3 interacting protein 1 0.0264558
PRSS23 protease, serine, 23 0.0260267
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0259306
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.025143
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.024699
TPM4 tropomyosin 4 0.0240081
HSPA8 heat shock 70kDa protein 8 0.0237749
EIF4A1 eukaryotic translation initiation factor 4A1 0.0236122
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0234871
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0229581
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0228989
ACTG1 actin gamma 1 0.0228556
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0227227
RPL23 ribosomal protein L23 0.0225981
SMC4 structural maintenance of chromosomes 4 0.0221588
SPDYA speedy/RINGO cell cycle regulator family member A 0.0218167
COL5A2 collagen, type V, alpha 2 0.0216028
ADAM19 ADAM metallopeptidase domain 19 0.0215015
SRRM2 serine/arginine repetitive matrix 2 0.0213766
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0212781
FAT1 FAT atypical cadherin 1 0.0211571
ACTN1 actinin, alpha 1 0.0211417

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.296894
LOX lysyl oxidase -0.15201
DLG1 discs, large homolog 1 (Drosophila) -0.0859059
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0723616
COL8A1 collagen, type VIII, alpha 1 -0.0660464
PODXL podocalyxin-like -0.0600817
THBS2 thrombospondin 2 -0.0569048
NDRG1 N-myc downstream regulated 1 -0.0555706
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0537484
FTH1 ferritin, heavy polypeptide 1 -0.0497455
LOXL2 lysyl oxidase-like 2 -0.0467656
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0459651
ABI3BP ABI family, member 3 (NESH) binding protein -0.0434191
ELL2 elongation factor, RNA polymerase II, 2 -0.0400506
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0395634
MAP4 microtubule-associated protein 4 -0.0353847
ZBTB20 zinc finger and BTB domain containing 20 -0.0346207
FBN1 fibrillin 1 -0.0341981
AUTS2 autism susceptibility candidate 2 -0.0340539
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0339355
BHLHE40 basic helix-loop-helix family, member e40 -0.0320615
FN1 fibronectin 1 -0.0316044
COL1A2 collagen, type I, alpha 2 -0.0302642
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0290187
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.028847
MRPS6 mitochondrial ribosomal protein S6 -0.028398
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0274485
MYADM myeloid-associated differentiation marker -0.0273156
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0262677
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0252173
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0232844
GOLGA4 golgin A4 -0.0232386
MBNL2 muscleblind-like splicing regulator 2 -0.021014
PRRX1 paired related homeobox 1 -0.0209349
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 -0.0207086
AKAP12 A kinase (PRKA) anchor protein 12 -0.0204865
TAPBP TAP binding protein (tapasin) -0.0201772
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0196428
VEGFC vascular endothelial growth factor C -0.0190949
ZEB2 zinc finger E-box binding homeobox 2 -0.0190236
CD109 CD109 molecule -0.0186606
FBXL2 F-box and leucine-rich repeat protein 2 -0.0179573
EXOC6B exocyst complex component 6B -0.01787
KIFAP3 kinesin-associated protein 3 -0.0178528
VEGFA vascular endothelial growth factor A -0.0173627
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0172774
LAMA5 laminin, alpha 5 -0.0172428
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0171715
INSIG1 insulin induced gene 1 -0.0167322
FRMD5 FERM domain containing 5 -0.0167175
ARL15 ADP-ribosylation factor-like 15 -0.0166902
EHBP1 EH domain binding protein 1 -0.0165288
SUCNR1 succinate receptor 1 -0.0161776
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0151471
SBF2 SET binding factor 2 -0.0150711
YEATS2 YEATS domain containing 2 -0.014693
C1D C1D nuclear receptor corepressor -0.0146802
TPST1 tyrosylprotein sulfotransferase 1 -0.0146363
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0143742
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0143274
MEIS2 Meis homeobox 2 -0.0140681
ZBTB7C zinc finger and BTB domain containing 7C -0.0140318
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0139953
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0138115
MBD5 methyl-CpG binding domain protein 5 -0.0137465
NF1 neurofibromin 1 -0.0136987
BIRC6 baculoviral IAP repeat containing 6 -0.0136121
ITCH itchy E3 ubiquitin protein ligase -0.0134019
NGLY1 N-glycanase 1 -0.0131346
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.013125
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0130578
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0129117
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0128369
ATP11B ATPase, class VI, type 11B -0.0127708
BSG basigin (Ok blood group) -0.0123796
DPYSL2 dihydropyrimidinase-like 2 -0.0123478
CHD9 chromodomain helicase DNA binding protein 9 -0.0123075
SOD2 superoxide dismutase 2, mitochondrial -0.0121688
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.012131
FNIP1 folliculin interacting protein 1 -0.0120498
TMEM165 transmembrane protein 165 -0.0119684
HIP1 huntingtin interacting protein 1 -0.0119308
LMAN1 lectin, mannose-binding, 1 -0.011922
PRKD1 protein kinase D1 -0.0118138
RFX7 regulatory factor X, 7 -0.0117862
POM121C POM121 transmembrane nucleoporin C -0.0117496
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) -0.0117106
KDM5B lysine (K)-specific demethylase 5B -0.0116696
RAB1A RAB1A, member RAS oncogene family -0.0116436
RCOR3 REST corepressor 3 -0.0116173
LRRC49 leucine rich repeat containing 49 -0.0115366
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0114765
MEF2D myocyte enhancer factor 2D -0.0111856
EPAS1 endothelial PAS domain protein 1 -0.0111666
AVL9 AVL9 homolog (S. cerevisiase) -0.0111158
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase -0.0110843
FNBP4 formin binding protein 4 -0.0110344
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0109642
SLC38A1 solute carrier family 38, member 1 -0.0107171
PIAS1 protein inhibitor of activated STAT, 1 -0.0106447