Darinaparsin_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.152045
TLE4 transducin-like enhancer of split 4 0.0928851
ZSWIM6 zinc finger, SWIM-type containing 6 0.0718799
FMN1 formin 1 0.0697437
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0652098
EXT1 exostosin glycosyltransferase 1 0.0628882
MYH9 myosin, heavy chain 9, non-muscle 0.0600071
LSAMP limbic system-associated membrane protein 0.0508567
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.04508
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.045056
TPM1 tropomyosin 1 (alpha) 0.0414096
SLIT2 slit homolog 2 (Drosophila) 0.039364
GLCCI1 glucocorticoid induced 1 0.0368282
HSPA8 heat shock 70kDa protein 8 0.0353796
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0351821
TRIO trio Rho guanine nucleotide exchange factor 0.0344761
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0327167
TRIB2 tribbles pseudokinase 2 0.0321579
PDE10A phosphodiesterase 10A 0.0316996
THBS1 thrombospondin 1 0.0310129
PLPP1 phospholipid phosphatase 1 0.0308396
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0303633
THSD4 thrombospondin, type I, domain containing 4 0.0300886
ACTG1 actin gamma 1 0.0298885
FNDC3A fibronectin type III domain containing 3A 0.0293861
STK38L serine/threonine kinase 38 like 0.0290235
KLHL13 kelch-like family member 13 0.0290013
CTNND1 catenin (cadherin-associated protein), delta 1 0.0278698
MRTFA myocardin related transcription factor A 0.0278082
NPAS2 neuronal PAS domain protein 2 0.0276822
SIK2 salt-inducible kinase 2 0.0275766
TENM4 teneurin transmembrane protein 4 0.0266993
PCBP3 poly(rC) binding protein 3 0.0265768
FAM107B family with sequence similarity 107, member B 0.0262805
VMP1 vacuole membrane protein 1 0.0260328
HOMER1 homer scaffolding protein 1 0.0260283
RNF213 ring finger protein 213 0.025255
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0251878
AHNAK AHNAK nucleoprotein 0.0249098
ANTXR1 anthrax toxin receptor 1 0.024807
PDLIM5 PDZ and LIM domain 5 0.0233426
FERMT2 fermitin family member 2 0.0231837
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0224352
MYO1E myosin IE 0.0224349
TPST1 tyrosylprotein sulfotransferase 1 0.0224112
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0222488
PBX1 pre-B-cell leukemia homeobox 1 0.0213264
INTS6 integrator complex subunit 6 0.0211821
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0211031
MED13 mediator complex subunit 13 0.0205079
RIGI RNA sensor RIG-I 0.0203863
GREM2 gremlin 2, DAN family BMP antagonist 0.0202809
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0200945
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0193332
AMOTL1 angiomotin like 1 0.0192339
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0191206
IRS1 insulin receptor substrate 1 0.0188403
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0188039
ACTN1 actinin, alpha 1 0.0185306
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0183677
PTPRD protein tyrosine phosphatase, receptor type, D 0.0182068
TPM4 tropomyosin 4 0.0181637
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0177341
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0175652
RPL4 ribosomal protein L4 0.0171223
SQSTM1 sequestosome 1 0.0169869
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0165796
KLF6 Kruppel-like factor 6 0.0164857
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0164498
LPIN1 lipin 1 0.0161126
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0160564
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0159686
MYO6 myosin VI 0.0159332
SMAD3 SMAD family member 3 0.0158944
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 0.0158651
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0158401
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0157729
PRKCA protein kinase C, alpha 0.0157635
GSE1 Gse1 coiled-coil protein 0.0157059
IGF1R insulin-like growth factor 1 receptor 0.0154769
DNM3 dynamin 3 0.0153455
STRN3 striatin, calmodulin binding protein 3 0.0153058
CUL3 cullin 3 0.0152803
PALLD palladin, cytoskeletal associated protein 0.015254
BCAS3 breast carcinoma amplified sequence 3 0.0151905
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0151774
TIMP3 TIMP metallopeptidase inhibitor 3 0.015174
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0151382
ASPH aspartate beta-hydroxylase 0.0151138
RPL23 ribosomal protein L23 0.0150495
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0150302
EEF2 eukaryotic translation elongation factor 2 0.0149885
IGF2R insulin-like growth factor 2 receptor 0.0149846
HSPH1 heat shock 105kDa/110kDa protein 1 0.0149491
TPT1 tumor protein, translationally-controlled 1 0.0149421
SET SET nuclear proto-oncogene 0.014932
PARD3 par-3 family cell polarity regulator 0.0149045
ZMIZ1 zinc finger, MIZ-type containing 1 0.0147656
SYNPO2 synaptopodin 2 0.0146639
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.014607

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.462141
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.220803
NRG1 neuregulin 1 -0.104258
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0703809
NDRG1 N-myc downstream regulated 1 -0.0601685
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0601413
LIMCH1 LIM and calponin homology domains 1 -0.0594784
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.058148
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0577932
P4HB prolyl 4-hydroxylase, beta polypeptide -0.056719
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0487839
MAP1B microtubule-associated protein 1B -0.0463783
GPC5 glypican 5 -0.0455625
MEF2A myocyte enhancer factor 2A -0.0435592
GDF15 growth differentiation factor 15 -0.0434737
GOLGA4 golgin A4 -0.0431624
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0423931
SOS1 son of sevenless homolog 1 (Drosophila) -0.0409979
SYT1 synaptotagmin I -0.040787
AKAP12 A kinase (PRKA) anchor protein 12 -0.0406145
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0394186
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0388499
ZBTB20 zinc finger and BTB domain containing 20 -0.0378503
ZNF292 zinc finger protein 292 -0.0350414
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0327855
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0320488
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0309764
WDR45B WD repeat domain 45B -0.0302595
COPA coatomer protein complex, subunit alpha -0.0298158
STC1 stanniocalcin 1 -0.0296011
USP34 ubiquitin specific peptidase 34 -0.0281389
SEC31A SEC31 homolog A (S. cerevisiae) -0.0280628
CADM2 cell adhesion molecule 2 -0.0276492
DCAF7 DDB1 and CUL4 associated factor 7 -0.026728
BIRC6 baculoviral IAP repeat containing 6 -0.0257355
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0251781
ZNF148 zinc finger protein 148 -0.025059
HELZ helicase with zinc finger -0.0249227
CD36 CD36 molecule (thrombospondin receptor) -0.0246682
FAM13A family with sequence similarity 13, member A -0.0245416
SETD5 SET domain containing 5 -0.0244635
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0242741
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0242671
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0241342
MAML2 mastermind-like 2 (Drosophila) -0.0237629
KDM5B lysine (K)-specific demethylase 5B -0.0237064
DPH6 diphthamine biosynthesis 6 -0.0236823
KPNB1 karyopherin (importin) beta 1 -0.0231853
RTN4 reticulon 4 -0.0228304
COL4A5 collagen, type IV, alpha 5 -0.0224448
ACBD3 acyl-CoA binding domain containing 3 -0.0223785
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0220935
MTSS2 MTSS I-BAR domain containing 2 -0.022031
DLC1 DLC1 Rho GTPase activating protein -0.0217218
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0215471
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0214221
IARS1 isoleucyl-tRNA synthetase 1 -0.021274
NCAM2 neural cell adhesion molecule 2 -0.0204764
CENPF centromere protein F, 350/400kDa -0.0202693
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.020147
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.020024
GARS1 glycyl-tRNA synthetase 1 -0.0199674
SRP54 signal recognition particle 54kDa -0.0198747
RHOA ras homolog family member A -0.0194529
PIBF1 progesterone immunomodulatory binding factor 1 -0.0192332
BRWD1 bromodomain and WD repeat domain containing 1 -0.0189215
IGFBP3 insulin-like growth factor binding protein 3 -0.0188793
PRTG protogenin -0.0185376
SCARB1 scavenger receptor class B, member 1 -0.0184226
TENT5A terminal nucleotidyltransferase 5A -0.0183236
PTMA prothymosin, alpha -0.0182652
FNBP1 formin binding protein 1 -0.0182551
NUP58 nucleoporin 58 -0.0181345
FTH1 ferritin, heavy polypeptide 1 -0.0180983
KDM2A lysine (K)-specific demethylase 2A -0.0180789
UBA6 ubiquitin-like modifier activating enzyme 6 -0.018023
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0179425
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0179262
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0175818
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0175392
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0174151
USP3 ubiquitin specific peptidase 3 -0.0173324
YEATS2 YEATS domain containing 2 -0.0172724
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0172695
SLC39A11 solute carrier family 39, member 11 -0.017238
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0171462
SLITRK6 SLIT and NTRK-like family, member 6 -0.0170872
ANGPT1 angiopoietin 1 -0.0170062
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0168595
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0167714
CBX3 chromobox homolog 3 -0.0165987
CHD9 chromodomain helicase DNA binding protein 9 -0.0164221
SMC4 structural maintenance of chromosomes 4 -0.016178
SEPTIN2 septin 2 -0.0160728
HMGA1 high mobility group AT-hook 1 -0.0160603
NBAS neuroblastoma amplified sequence -0.0160572
NPEPPS aminopeptidase puromycin sensitive -0.0158805
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0158529
SEC63 SEC63 homolog (S. cerevisiae) -0.0157803
COL6A1 collagen, type VI, alpha 1 -0.0157435