Darinaparsin_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.118389
CXCL8 chemokine (C-X-C motif) ligand 8 0.117827
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.110541
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0993815
MT2A metallothionein 2A 0.0666893
STC1 stanniocalcin 1 0.0605864
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.054872
INHBA inhibin, beta A 0.0512622
IER3 immediate early response 3 0.0462657
EXT1 exostosin glycosyltransferase 1 0.0458648
ERRFI1 ERBB receptor feedback inhibitor 1 0.044437
ASPH aspartate beta-hydroxylase 0.0443666
ZBTB38 zinc finger and BTB domain containing 38 0.0430281
LDHA lactate dehydrogenase A 0.0417864
ENO1 enolase 1, (alpha) 0.0415928
VCL vinculin 0.039316
CAVIN1 caveolae associated protein 1 0.0388345
CALR calreticulin 0.0377054
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0371518
MYH9 myosin, heavy chain 9, non-muscle 0.0363704
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0356284
TPT1 tumor protein, translationally-controlled 1 0.0348616
TM4SF1 transmembrane 4 L six family member 1 0.0345642
IFI6 interferon, alpha-inducible protein 6 0.0344573
PLEC plectin 0.0344003
IGFBP7 insulin-like growth factor binding protein 7 0.0315395
CANX calnexin 0.0311932
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.031158
WWTR1 WW domain containing transcription regulator 1 0.0311518
TMSB4X thymosin beta 4, X-linked 0.0310064
PDLIM5 PDZ and LIM domain 5 0.0297984
ANGPTL4 angiopoietin-like 4 0.0282052
ACTG1 actin gamma 1 0.0253793
EIF1 eukaryotic translation initiation factor 1 0.0247693
HLA-B major histocompatibility complex, class I, B 0.0246652
RIGI RNA sensor RIG-I 0.0246251
SQSTM1 sequestosome 1 0.0243777
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.024366
RPL26 ribosomal protein L26 0.0236455
RACK1 receptor for activated C kinase 1 0.0227044
KLF6 Kruppel-like factor 6 0.0223689
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0220892
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0217487
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0212395
STAT1 signal transducer and activator of transcription 1, 91kDa 0.020936
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0209304
RPL30 ribosomal protein L30 0.0209007
SP100 SP100 nuclear antigen 0.0204368
APP amyloid beta (A4) precursor protein 0.0203194
RPS8 ribosomal protein S8 0.0201491
PALLD palladin, cytoskeletal associated protein 0.0200349
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0199872
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0196464
CNTN5 contactin 5 0.0195793
ALCAM activated leukocyte cell adhesion molecule 0.0194294
SAMD9 sterile alpha motif domain containing 9 0.0193533
B2M beta-2-microglobulin 0.0192473
RPS12 ribosomal protein S12 0.0190037
HDAC9 histone deacetylase 9 0.0189023
COL3A1 collagen, type III, alpha 1 0.0184269
RPS3 ribosomal protein S3 0.0183417
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0182659
TBX3 T-box 3 0.0181536
IL6ST interleukin 6 signal transducer 0.0178936
IFITM3 interferon induced transmembrane protein 3 0.0177967
TMSB10 thymosin beta 10 0.0177266
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0177234
IRAK2 interleukin-1 receptor-associated kinase 2 0.0176576
LAMC2 laminin, gamma 2 0.0176094
INTS6 integrator complex subunit 6 0.0175903
TPM4 tropomyosin 4 0.0175846
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0175505
ZBTB20 zinc finger and BTB domain containing 20 0.0174999
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0172197
AKAP12 A kinase (PRKA) anchor protein 12 0.0171675
RPL12 ribosomal protein L12 0.0171613
RPL34 ribosomal protein L34 0.0171266
RPL37A ribosomal protein L37a 0.0170738
NT5E 5'-nucleotidase, ecto (CD73) 0.0170117
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0169312
HLA-E major histocompatibility complex, class I, E 0.0168857
NAP1L1 nucleosome assembly protein 1-like 1 0.0167222
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0164949
BZW1 basic leucine zipper and W2 domains 1 0.0161071
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 0.015927
IER2 immediate early response 2 0.0157777
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0155461
F3 coagulation factor III (thromboplastin, tissue factor) 0.0154642
CTSB cathepsin B 0.015355
RSU1 Ras suppressor protein 1 0.0153221
RPS24 ribosomal protein S24 0.0151707
GJA1 gap junction protein, alpha 1, 43kDa 0.0150632
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0149953
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0148447
RPL13A ribosomal protein L13a 0.0148328
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0147283
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0146085
DUSP6 dual specificity phosphatase 6 0.0145881
AHNAK AHNAK nucleoprotein 0.0143952
HSPA8 heat shock 70kDa protein 8 0.0142973

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.228754
NDRG1 N-myc downstream regulated 1 -0.189896
CADM1 cell adhesion molecule 1 -0.142383
VEGFA vascular endothelial growth factor A -0.0994581
FNDC3B fibronectin type III domain containing 3B -0.0986941
TRIO trio Rho guanine nucleotide exchange factor -0.0792219
PDE10A phosphodiesterase 10A -0.0770039
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0731024
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0730137
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0623832
JARID2 jumonji, AT rich interactive domain 2 -0.053007
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0508849
TSC22D2 TSC22 domain family, member 2 -0.0494899
PTK2 protein tyrosine kinase 2 -0.0492083
GOLGA4 golgin A4 -0.0481152
QKI QKI, KH domain containing, RNA binding -0.0466597
COL6A3 collagen, type VI, alpha 3 -0.045863
KMT2E lysine (K)-specific methyltransferase 2E -0.045561
ATP13A3 ATPase type 13A3 -0.0430528
COL5A1 collagen, type V, alpha 1 -0.0422807
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0416927
ZNF292 zinc finger protein 292 -0.0406725
TRAM1 translocation associated membrane protein 1 -0.0393228
RUNX1 runt-related transcription factor 1 -0.0383937
RBM39 RNA binding motif protein 39 -0.0377515
DPYSL3 dihydropyrimidinase-like 3 -0.0370513
CD109 CD109 molecule -0.0369084
ZFAND3 zinc finger, AN1-type domain 3 -0.0366929
TMEM165 transmembrane protein 165 -0.0364808
UBA6 ubiquitin-like modifier activating enzyme 6 -0.035864
USP3 ubiquitin specific peptidase 3 -0.0352373
COPA coatomer protein complex, subunit alpha -0.0328578
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0326026
KIF13A kinesin family member 13A -0.0325321
TFG TRK-fused gene -0.0323915
ESYT2 extended synaptotagmin-like protein 2 -0.0317046
NOTCH2 notch 2 -0.0314824
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0313872
CDH13 cadherin 13 -0.0310536
MATR3 matrin 3 -0.0308046
KMT2C lysine (K)-specific methyltransferase 2C -0.0303323
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0292842
SBF2 SET binding factor 2 -0.0292382
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.02863
ELL2 elongation factor, RNA polymerase II, 2 -0.0283077
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0282843
RLF rearranged L-myc fusion -0.0281107
CCNL1 cyclin L1 -0.027767
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0276996
ANKRD11 ankyrin repeat domain 11 -0.0273521
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0273124
TBC1D23 TBC1 domain family, member 23 -0.0270297
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.027026
HELZ helicase with zinc finger -0.026865
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0265842
CD44 CD44 molecule (Indian blood group) -0.0265714
EGFR epidermal growth factor receptor -0.0264033
ADAM9 ADAM metallopeptidase domain 9 -0.0263736
CABIN1 calcineurin binding protein 1 -0.0263432
ADAM17 ADAM metallopeptidase domain 17 -0.0261564
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0261562
HSPG2 heparan sulfate proteoglycan 2 -0.0259904
RAB6A RAB6A, member RAS oncogene family -0.0258918
PDE8A phosphodiesterase 8A -0.0258561
PSD3 pleckstrin and Sec7 domain containing 3 -0.0257856
RNF145 ring finger protein 145 -0.0253479
NBAS neuroblastoma amplified sequence -0.0252018
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0251632
RAB2A RAB2A, member RAS oncogene family -0.0251228
TENT4A terminal nucleotidyltransferase 4A -0.0249075
PTEN phosphatase and tensin homolog -0.0247359
DPYD dihydropyrimidine dehydrogenase -0.0247033
COL7A1 collagen, type VII, alpha 1 -0.0245919
SETD5 SET domain containing 5 -0.0244858
GLS2 glutaminase 2 (liver, mitochondrial) -0.0244408
ATP11B ATPase, class VI, type 11B -0.0243625
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 -0.0242985
ITCH itchy E3 ubiquitin protein ligase -0.0240966
MRPS6 mitochondrial ribosomal protein S6 -0.0237929
PCBP2 poly(rC) binding protein 2 -0.0235616
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0234906
EEF2 eukaryotic translation elongation factor 2 -0.0233411
VEGFC vascular endothelial growth factor C -0.0231193
COL6A1 collagen, type VI, alpha 1 -0.023105
PARD3 par-3 family cell polarity regulator -0.0230513
ZNF207 zinc finger protein 207 -0.0230398
MARCHF6 membrane associated ring-CH-type finger 6 -0.0230126
ACTN4 actinin, alpha 4 -0.0226513
GSK3B glycogen synthase kinase 3 beta -0.0226046
MYO9B myosin IXB -0.0223753
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0222637
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0222589
SRPK2 SRSF protein kinase 2 -0.0221992
PTPRG protein tyrosine phosphatase, receptor type, G -0.0221982
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0221365
ARF4 ADP-ribosylation factor 4 -0.0220852
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.0219279
PRR16 proline rich 16 -0.0218618
SPAG9 sperm associated antigen 9 -0.0217283
LAMA5 laminin, alpha 5 -0.021586