Darinaparsin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.137312
LMO7 LIM domain 7 0.117952
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.10354
MYO1E myosin IE 0.0949981
MT2A metallothionein 2A 0.0775224
PTPRK protein tyrosine phosphatase, receptor type, K 0.0761352
FAT1 FAT atypical cadherin 1 0.072069
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0700411
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0654996
EXT1 exostosin glycosyltransferase 1 0.0622013
TTC3 tetratricopeptide repeat domain 3 0.0544961
EZR ezrin 0.0544601
ASPH aspartate beta-hydroxylase 0.0539558
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0498824
LOC102724023 ES1 protein homolog, mitochondrial 0.0496917
AHNAK AHNAK nucleoprotein 0.049195
EGFR epidermal growth factor receptor 0.0489652
EMP1 epithelial membrane protein 1 0.0481169
ITGA6 integrin, alpha 6 0.0468133
ALCAM activated leukocyte cell adhesion molecule 0.0463268
ACTG1 actin gamma 1 0.0430434
RPL7A ribosomal protein L7a 0.0428674
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0427439
LAMA4 laminin, alpha 4 0.0427242
SVIL supervillin 0.0421366
HSPA8 heat shock 70kDa protein 8 0.0413657
ZBTB20 zinc finger and BTB domain containing 20 0.0399765
ANXA1 annexin A1 0.0397664
DSPP dentin sialophosphoprotein 0.0397261
GREB1L growth regulation by estrogen in breast cancer-like 0.039164
TPT1 tumor protein, translationally-controlled 1 0.0388851
MACF1 microtubule-actin crosslinking factor 1 0.0385644
BACE2 beta-site APP-cleaving enzyme 2 0.0369067
MYH14 myosin, heavy chain 14, non-muscle 0.0364351
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.0348982
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0347438
PARD3B par-3 family cell polarity regulator beta 0.0342902
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0341006
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0340063
MBNL1 muscleblind-like splicing regulator 1 0.0334594
MT1E metallothionein 1E 0.0330339
MAML3 mastermind-like 3 (Drosophila) 0.0324943
PDE4D phosphodiesterase 4D, cAMP-specific 0.0320801
AFF1 AF4/FMR2 family, member 1 0.0320508
MT1X metallothionein 1X 0.0319321
SAMD4A sterile alpha motif domain containing 4A 0.0319031
MYH9 myosin, heavy chain 9, non-muscle 0.0313619
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 0.0308362
ANTXR2 anthrax toxin receptor 2 0.0307694
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0301718
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.030107
SRRM2 serine/arginine repetitive matrix 2 0.0298679
RIGI RNA sensor RIG-I 0.0297439
CLOCK clock circadian regulator 0.0293951
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 0.0293044
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0291052
PIGR polymeric immunoglobulin receptor 0.0288578
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0284536
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0284173
ERRFI1 ERBB receptor feedback inhibitor 1 0.0280779
POF1B premature ovarian failure, 1B 0.0269598
RPL19 ribosomal protein L19 0.0263198
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0262373
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0261545
ITPRID2 ITPR interacting domain containing 2 0.0258367
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0257822
PDLIM5 PDZ and LIM domain 5 0.025649
TRIO trio Rho guanine nucleotide exchange factor 0.0254684
INTS6 integrator complex subunit 6 0.0248891
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0245523
RPS29 ribosomal protein S29 0.0245492
TJP1 tight junction protein 1 0.0240329
PLEC plectin 0.0236001
IQGAP1 IQ motif containing GTPase activating protein 1 0.0235857
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0235312
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 0.0235129
CALR calreticulin 0.0234961
SOX4 SRY (sex determining region Y)-box 4 0.0234305
RNF217 ring finger protein 217 0.023374
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0229939
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0229607
MUC13 mucin 13, cell surface associated 0.0228909
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0227356
CATSPERB catsper channel auxiliary subunit beta 0.02267
RPL34 ribosomal protein L34 0.0226534
SLCO3A1 solute carrier organic anion transporter family, member 3A1 0.0226068
DUSP16 dual specificity phosphatase 16 0.0226058
PTPRB protein tyrosine phosphatase, receptor type, B 0.0225668
FHIT fragile histidine triad 0.0224486
LDHA lactate dehydrogenase A 0.0220278
TGFBR3 transforming growth factor, beta receptor III 0.0219701
LURAP1L leucine rich adaptor protein 1-like 0.0218565
UBN2 ubinuclein 2 0.0218461
H1-4 H1.4 linker histone, cluster member 0.0216944
CDK13 cyclin-dependent kinase 13 0.0216527
ENO1 enolase 1, (alpha) 0.0213461
AHI1 Abelson helper integration site 1 0.0213189
AEBP2 AE binding protein 2 0.0211995
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.021138
LAMC2 laminin, gamma 2 0.021117

decreased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.171596
PTMA prothymosin, alpha -0.127943
FTH1 ferritin, heavy polypeptide 1 -0.123749
TNS4 tensin 4 -0.114354
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.103681
RNF43 ring finger protein 43 -0.0890972
NDRG1 N-myc downstream regulated 1 -0.0879614
GOLGA4 golgin A4 -0.081642
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0782818
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0771699
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0764142
CD46 CD46 molecule, complement regulatory protein -0.074284
ANXA2 annexin A2 -0.073908
ZNF292 zinc finger protein 292 -0.0722182
EREG epiregulin -0.0649962
HMGA1 high mobility group AT-hook 1 -0.0622363
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0589867
TRIM2 tripartite motif containing 2 -0.0586765
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0548375
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0546468
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0534242
SETD5 SET domain containing 5 -0.0531886
FOSL1 FOS-like antigen 1 -0.0531169
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0524402
MED13L mediator complex subunit 13-like -0.0517821
RBM39 RNA binding motif protein 39 -0.050805
ARHGAP32 Rho GTPase activating protein 32 -0.050231
WAC WW domain containing adaptor with coiled-coil -0.0501133
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0499311
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0497398
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0490352
ANKRD11 ankyrin repeat domain 11 -0.0489692
COG5 component of oligomeric golgi complex 5 -0.0478824
TXNRD1 thioredoxin reductase 1 -0.0475527
PTBP3 polypyrimidine tract binding protein 3 -0.0460351
WDR43 WD repeat domain 43 -0.0459967
ETNK1 ethanolamine kinase 1 -0.0456949
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0446089
BIRC6 baculoviral IAP repeat containing 6 -0.0445196
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0442688
PRSS3 protease, serine, 3 -0.0441503
PUM2 pumilio RNA-binding family member 2 -0.0437859
POTEF POTE ankyrin domain family, member F -0.0429655
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor -0.042553
RNF145 ring finger protein 145 -0.0422355
ZFAND3 zinc finger, AN1-type domain 3 -0.0421709
ACTN4 actinin, alpha 4 -0.0414399
MON2 MON2 homolog (S. cerevisiae) -0.0412354
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0411888
USP3 ubiquitin specific peptidase 3 -0.040936
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0405498
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0405491
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0404686
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0402546
GPHN gephyrin -0.0401053
RREB1 ras responsive element binding protein 1 -0.0398001
NUP58 nucleoporin 58 -0.0396964
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0396638
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0395036
KDM6A lysine (K)-specific demethylase 6A -0.0393534
PNISR PNN-interacting serine/arginine-rich protein -0.0388845
FAM13A family with sequence similarity 13, member A -0.0388105
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0387862
KDM7A lysine (K)-specific demethylase 7A -0.0387854
YBX1 Y box binding protein 1 -0.038778
DERA deoxyribose-phosphate aldolase (putative) -0.0386777
BCLAF1 BCL2-associated transcription factor 1 -0.0383358
VEGFA vascular endothelial growth factor A -0.0379443
RFX7 regulatory factor X, 7 -0.0378816
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0375194
CCNL1 cyclin L1 -0.0371414
CENPF centromere protein F, 350/400kDa -0.0371127
OSBPL9 oxysterol binding protein-like 9 -0.036605
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0364064
SCAF11 SR-related CTD-associated factor 11 -0.036369
STRN3 striatin, calmodulin binding protein 3 -0.0359132
KMT2E lysine (K)-specific methyltransferase 2E -0.0354875
GSK3B glycogen synthase kinase 3 beta -0.0354496
ESRP1 epithelial splicing regulatory protein 1 -0.0351735
MARCHF6 membrane associated ring-CH-type finger 6 -0.0350877
CEMIP cell migration inducing protein, hyaluronan binding -0.0347258
GARS1 glycyl-tRNA synthetase 1 -0.0344477
ATP5F1B ATP synthase F1 subunit beta -0.0344207
RPL23 ribosomal protein L23 -0.0341087
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0335336
ZFC3H1 zinc finger, C3H1-type containing -0.0334849
OGA O-GlcNAcase -0.03343
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0333938
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0332859
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0332432
TRA2A transformer 2 alpha homolog (Drosophila) -0.0332411
AVL9 AVL9 homolog (S. cerevisiase) -0.0327364
RBM25 RNA binding motif protein 25 -0.0325999
MATR3 matrin 3 -0.0325147
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0324482
SREBF2 sterol regulatory element binding transcription factor 2 -0.0323262
PCBP2 poly(rC) binding protein 2 -0.0321659
FNDC3B fibronectin type III domain containing 3B -0.0320282
NBAS neuroblastoma amplified sequence -0.0315608
ZMYM2 zinc finger, MYM-type 2 -0.0315597