Darinaparsin_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.205841
PTMA prothymosin, alpha 0.130419
TMSB4X thymosin beta 4, X-linked 0.129694
ERRFI1 ERBB receptor feedback inhibitor 1 0.106159
DST dystonin 0.0883857
TPT1 tumor protein, translationally-controlled 1 0.0794664
MT2A metallothionein 2A 0.0748249
FMNL2 formin-like 2 0.0707432
CAPRIN2 caprin family member 2 0.0701924
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.066301
KLF6 Kruppel-like factor 6 0.0614757
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0574601
BIRC3 baculoviral IAP repeat containing 3 0.051346
KDM3A lysine (K)-specific demethylase 3A 0.0513009
NAP1L1 nucleosome assembly protein 1-like 1 0.0495099
TXNIP thioredoxin interacting protein 0.049489
RPS8 ribosomal protein S8 0.0490199
FTL ferritin, light polypeptide 0.0471457
RPL12 ribosomal protein L12 0.0466043
MT1X metallothionein 1X 0.046196
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0453447
PRELID2 PRELI domain containing 2 0.043332
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0424722
VCL vinculin 0.0418588
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0390569
SQSTM1 sequestosome 1 0.0383338
NAMPT nicotinamide phosphoribosyltransferase 0.03749
OGA O-GlcNAcase 0.0365819
MT1E metallothionein 1E 0.0365789
PGK1 phosphoglycerate kinase 1 0.0364346
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0361321
SDC4 syndecan 4 0.0351505
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.035141
H1-0 H1.0 linker histone 0.0349992
MYH9 myosin, heavy chain 9, non-muscle 0.034918
RPL26 ribosomal protein L26 0.0345484
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0342639
EREG epiregulin 0.0341605
AHNAK AHNAK nucleoprotein 0.0340896
ANGPTL4 angiopoietin-like 4 0.0337954
OSBPL8 oxysterol binding protein-like 8 0.0334608
SPAG9 sperm associated antigen 9 0.0323842
SP100 SP100 nuclear antigen 0.0314761
ADGRG6 adhesion G protein-coupled receptor G6 0.0313059
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0309686
EIF4A1 eukaryotic translation initiation factor 4A1 0.0305348
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0301665
DDIT4 DNA-damage-inducible transcript 4 0.0297419
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.029607
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0295961
ANKRD36 ankyrin repeat domain 36 0.0292643
TPI1 triosephosphate isomerase 1 0.0288578
RPL35A ribosomal protein L35a 0.0287681
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0286591
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0276829
RPS12 ribosomal protein S12 0.027472
PLK2 polo-like kinase 2 0.0273917
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0272872
TMSB10 thymosin beta 10 0.0271834
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0266143
EIF4A2 eukaryotic translation initiation factor 4A2 0.026403
DPYD dihydropyrimidine dehydrogenase 0.0262222
HSPA8 heat shock 70kDa protein 8 0.025604
PLEC plectin 0.0255857
PTPRF protein tyrosine phosphatase, receptor type, F 0.0253282
ZDHHC14 zinc finger, DHHC-type containing 14 0.0252342
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0250512
RPL19 ribosomal protein L19 0.0243247
TPRG1 tumor protein p63 regulated 1 0.0242282
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0237262
BIRC2 baculoviral IAP repeat containing 2 0.0236904
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0235426
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0234557
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0233168
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0233148
CFLAR CASP8 and FADD-like apoptosis regulator 0.0231122
RPS27A ribosomal protein S27a 0.0231117
RPLP1 ribosomal protein, large, P1 0.0230697
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0230077
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0228818
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0225952
RPL13A ribosomal protein L13a 0.0222446
RLF rearranged L-myc fusion 0.0222325
SKP1 S-phase kinase-associated protein 1 0.0221436
HLA-E major histocompatibility complex, class I, E 0.0220812
WSB1 WD repeat and SOCS box containing 1 0.0218799
CEP250 centrosomal protein 250kDa 0.021796
BZW1 basic leucine zipper and W2 domains 1 0.021787
RPL31 ribosomal protein L31 0.0217092
TFRC transferrin receptor 0.0214754
RPL7A ribosomal protein L7a 0.0209536
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0209182
HILPDA hypoxia inducible lipid droplet-associated 0.0209176
RPL36 ribosomal protein L36 0.0208885
RAD51B RAD51 paralog B 0.0207123
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0202509
NASP nuclear autoantigenic sperm protein (histone-binding) 0.0202081
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.0201482
ASPH aspartate beta-hydroxylase 0.0200681
RIOK3 RIO kinase 3 0.0199832

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.248132
POTEF POTE ankyrin domain family, member F -0.194029
TXNRD1 thioredoxin reductase 1 -0.164055
EGR1 early growth response 1 -0.103493
HMGA1 high mobility group AT-hook 1 -0.0800433
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0789963
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0762948
SLC38A2 solute carrier family 38, member 2 -0.0750579
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0733684
EEF2 eukaryotic translation elongation factor 2 -0.0664304
P4HB prolyl 4-hydroxylase, beta polypeptide -0.066383
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0582343
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0581826
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.054681
TAPBP TAP binding protein (tapasin) -0.0535505
FTH1 ferritin, heavy polypeptide 1 -0.0526682
LOC112694756 uncharaterized LOC112694756 -0.0518253
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0498349
MYADM myeloid-associated differentiation marker -0.0491943
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0480512
CENPF centromere protein F, 350/400kDa -0.0468563
GSK3B glycogen synthase kinase 3 beta -0.0456396
RTN4 reticulon 4 -0.0442449
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0430683
VIM vimentin -0.0430573
PSD3 pleckstrin and Sec7 domain containing 3 -0.042901
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0414818
LOXL2 lysyl oxidase-like 2 -0.0412558
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.040898
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0405746
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0398006
PCBP2 poly(rC) binding protein 2 -0.0393376
WARS1 tryptophanyl-tRNA synthetase 1 -0.0379885
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0376382
YEATS2 YEATS domain containing 2 -0.0375664
FNIP1 folliculin interacting protein 1 -0.0370196
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0358937
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0355854
RAI1 retinoic acid induced 1 -0.0349601
SLCO4A1 solute carrier organic anion transporter family, member 4A1 -0.0340784
SPRY4 sprouty homolog 4 (Drosophila) -0.0337755
ZMYND8 zinc finger, MYND-type containing 8 -0.0334174
DENND1A DENN/MADD domain containing 1A -0.0330158
MKI67 marker of proliferation Ki-67 -0.0328974
MCL1 myeloid cell leukemia 1 -0.0321403
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0318368
BIRC6 baculoviral IAP repeat containing 6 -0.0315731
TNS3 tensin 3 -0.0314808
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0314192
POM121 POM121 transmembrane nucleoporin -0.0313111
ADAM17 ADAM metallopeptidase domain 17 -0.0308881
USP34 ubiquitin specific peptidase 34 -0.030841
FOSL1 FOS-like antigen 1 -0.0308122
ENO2 enolase 2 (gamma, neuronal) -0.0306402
MYO10 myosin X -0.0299736
ACTG1 actin gamma 1 -0.0299586
OSMR oncostatin M receptor -0.0298993
PODXL podocalyxin-like -0.0296233
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0293303
PTK2 protein tyrosine kinase 2 -0.0290696
KDM4C lysine (K)-specific demethylase 4C -0.0289909
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0287854
ETNK1 ethanolamine kinase 1 -0.028235
FBXO11 F-box protein 11 -0.0282143
CCNL1 cyclin L1 -0.0281639
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0281297
ANKRD11 ankyrin repeat domain 11 -0.0275987
TAS2R14 taste receptor, type 2, member 14 -0.0274748
DOCK11 dedicator of cytokinesis 11 -0.0273967
TUBB6 tubulin, beta 6 class V -0.0273798
EFNA5 ephrin-A5 -0.0271875
CD44 CD44 molecule (Indian blood group) -0.0271077
TMEM41B transmembrane protein 41B -0.026997
EHBP1 EH domain binding protein 1 -0.0266975
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0266453
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.026465
CAPN2 calpain 2, (m/II) large subunit -0.0264328
PRRC2B proline-rich coiled-coil 2B -0.0260567
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0260485
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0259014
ZNF644 zinc finger protein 644 -0.0258847
SFPQ splicing factor proline/glutamine-rich -0.0258604
MAP4 microtubule-associated protein 4 -0.0256184
FLNB filamin B, beta -0.0256029
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0249002
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0248592
RB1CC1 RB1-inducible coiled-coil 1 -0.0245609
PUM2 pumilio RNA-binding family member 2 -0.0243587
UBXN4 UBX domain protein 4 -0.0243469
TRIP12 thyroid hormone receptor interactor 12 -0.0227487
CALD1 caldesmon 1 -0.0227444
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.022361
CLTC clathrin, heavy chain (Hc) -0.022194
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -0.0220371
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0219693
ZNF91 zinc finger protein 91 -0.0219556
BPTF bromodomain PHD finger transcription factor -0.0218222
JMJD1C jumonji domain containing 1C -0.0214688
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0212806
LRRC49 leucine rich repeat containing 49 -0.021261