Darinaparsin_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SAMD4A sterile alpha motif domain containing 4A 0.143082
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.131138
LAMC2 laminin, gamma 2 0.121048
MYO1E myosin IE 0.103505
ASPH aspartate beta-hydroxylase 0.0833511
LAMB3 laminin, beta 3 0.0721821
MACF1 microtubule-actin crosslinking factor 1 0.0706809
MT2A metallothionein 2A 0.0700642
TMSB10 thymosin beta 10 0.0672163
CEMIP cell migration inducing protein, hyaluronan binding 0.0661825
KYNU kynureninase 0.0658146
AKAP12 A kinase (PRKA) anchor protein 12 0.0653372
BACE2 beta-site APP-cleaving enzyme 2 0.0643945
EFNA5 ephrin-A5 0.0604476
F3 coagulation factor III (thromboplastin, tissue factor) 0.0593191
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0570961
RBM47 RNA binding motif protein 47 0.0568872
NABP1 nucleic acid binding protein 1 0.0549108
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0524943
MYH9 myosin, heavy chain 9, non-muscle 0.0513321
EXT1 exostosin glycosyltransferase 1 0.0507969
EGFR epidermal growth factor receptor 0.0504013
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.0485803
PLEC plectin 0.0481409
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0457938
STC1 stanniocalcin 1 0.0456942
PPARD peroxisome proliferator-activated receptor delta 0.044861
SMAD3 SMAD family member 3 0.0445605
VIM vimentin 0.0435066
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0434868
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0424552
INTS6 integrator complex subunit 6 0.0423225
PKM pyruvate kinase, muscle 0.0417244
STK17A serine/threonine kinase 17a 0.0415301
RPS8 ribosomal protein S8 0.0409759
IGF1R insulin-like growth factor 1 receptor 0.0404807
LMO7 LIM domain 7 0.0402017
ARB2A ARB2 cotranscriptional regulator A 0.0392431
CD59 CD59 molecule, complement regulatory protein 0.0391427
DSPP dentin sialophosphoprotein 0.037662
PM20D1 peptidase M20 domain containing 1 0.0374105
LIMCH1 LIM and calponin homology domains 1 0.0360326
SACK1A scaffolding CK1 anchoring protein A 0.0357088
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.035369
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0348188
BAIAP2L1 BAI1-associated protein 2-like 1 0.0347631
MCL1 myeloid cell leukemia 1 0.0341224
CLIP1 CAP-GLY domain containing linker protein 1 0.0340937
BZW1 basic leucine zipper and W2 domains 1 0.0336243
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0332858
CREB5 cAMP responsive element binding protein 5 0.0323688
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0322009
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.03214
BMAL2 basic helix-loop-helix ARNT like 2 0.0321294
AK1 adenylate kinase 1 0.03199
AKR1C2 aldo-keto reductase family 1, member C2 0.0319715
DTNA dystrobrevin, alpha 0.0319528
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0319229
TPCN1 two pore segment channel 1 0.0312272
RAB10 RAB10, member RAS oncogene family 0.0310403
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0310048
SSH2 slingshot protein phosphatase 2 0.0308618
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0305442
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 0.0304404
CATSPERB catsper channel auxiliary subunit beta 0.029877
WNK1 WNK lysine deficient protein kinase 1 0.0296729
MSN moesin 0.0296707
PRELID2 PRELI domain containing 2 0.0295641
GRAMD1B GRAM domain containing 1B 0.0295506
ANGPTL4 angiopoietin-like 4 0.0295498
VEZT vezatin, adherens junctions transmembrane protein 0.029427
KLC1 kinesin light chain 1 0.0292646
ANTXR2 anthrax toxin receptor 2 0.0291907
SMYD3 SET and MYND domain containing 3 0.0291439
MTAP methylthioadenosine phosphorylase 0.0285635
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0283853
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.0283237
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0282612
TTC9 tetratricopeptide repeat domain 9 0.028203
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 0.0281699
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0281257
COL6A1 collagen, type VI, alpha 1 0.0281176
TJP1 tight junction protein 1 0.0279161
TUFT1 tuftelin 1 0.0278372
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0276467
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0275331
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0275077
BIRC3 baculoviral IAP repeat containing 3 0.0274978
IGF2R insulin-like growth factor 2 receptor 0.0273255
SGMS2 sphingomyelin synthase 2 0.0272654
RPLP1 ribosomal protein, large, P1 0.0271223
RUNX1 runt-related transcription factor 1 0.0270237
HDAC9 histone deacetylase 9 0.0267148
SRSF4 serine/arginine-rich splicing factor 4 0.0267113
ZFP36L1 ZFP36 ring finger protein-like 1 0.0266535
KRT17 keratin 17, type I 0.0266312
CALU calumenin 0.0266201
RNF169 ring finger protein 169 0.02657
NT5E 5'-nucleotidase, ecto (CD73) 0.0265232
NIBAN2 niban apoptosis regulator 2 0.0261195

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.128674
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0965507
IGFBP3 insulin-like growth factor binding protein 3 -0.0943775
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0933674
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0888505
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.088492
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0760656
ATOSA atos homolog A -0.0682568
NCOA3 nuclear receptor coactivator 3 -0.0614006
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0595624
IFIH1 interferon induced with helicase C domain 1 -0.0576517
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0569919
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0556294
MTUS1 microtubule associated tumor suppressor 1 -0.0539254
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0534701
FAM107B family with sequence similarity 107, member B -0.0531022
ZNF207 zinc finger protein 207 -0.0523479
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.05197
ANXA1 annexin A1 -0.0510564
USP34 ubiquitin specific peptidase 34 -0.0506578
FDPS farnesyl diphosphate synthase -0.050056
DSCAM Down syndrome cell adhesion molecule -0.0499082
KDM3A lysine (K)-specific demethylase 3A -0.0494036
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0485969
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0467337
SLMAP sarcolemma associated protein -0.0466822
GRB10 growth factor receptor-bound protein 10 -0.0461357
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0450194
BTG1 B-cell translocation gene 1, anti-proliferative -0.0448816
CPNE8 copine VIII -0.0446598
H3-3B H3.3 histone B -0.0445214
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0440038
KMT2E lysine (K)-specific methyltransferase 2E -0.0439973
ATXN2 ataxin 2 -0.0439852
IGF2 insulin-like growth factor 2 -0.0434219
NALF1 NALCN channel auxiliary factor 1 -0.0433716
SREBF2 sterol regulatory element binding transcription factor 2 -0.0433323
RPS6 ribosomal protein S6 -0.0431191
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0423526
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0423444
ESYT2 extended synaptotagmin-like protein 2 -0.0419688
TRA2A transformer 2 alpha homolog (Drosophila) -0.0418481
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0415343
DST dystonin -0.0414859
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0414786
EIF1 eukaryotic translation initiation factor 1 -0.0411261
TXNRD1 thioredoxin reductase 1 -0.0409003
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0406945
COPA coatomer protein complex, subunit alpha -0.0402459
SNX9 sorting nexin 9 -0.0396799
FTH1 ferritin, heavy polypeptide 1 -0.0394129
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0391004
MARCHF6 membrane associated ring-CH-type finger 6 -0.0388403
S100A8 S100 calcium binding protein A8 -0.0385357
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0383204
NIPBL Nipped-B homolog (Drosophila) -0.0380043
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0374391
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0373266
TNPO1 transportin 1 -0.0369382
CANX calnexin -0.0369354
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0368671
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0365244
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0364546
RPL23 ribosomal protein L23 -0.0359554
OSBPL10 oxysterol binding protein-like 10 -0.0357392
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0350282
FMN1 formin 1 -0.0347393
ZMYND8 zinc finger, MYND-type containing 8 -0.0345908
SPAG9 sperm associated antigen 9 -0.0345791
RAD23B RAD23 homolog B (S. cerevisiae) -0.0343855
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0343337
DOCK4 dedicator of cytokinesis 4 -0.0340192
DSG2 desmoglein 2 -0.0338269
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0336112
GCLC glutamate-cysteine ligase, catalytic subunit -0.0333731
GARS1 glycyl-tRNA synthetase 1 -0.03332
MCTP2 multiple C2 domains, transmembrane 2 -0.0331618
DENND1A DENN/MADD domain containing 1A -0.0331224
KLF5 Kruppel-like factor 5 (intestinal) -0.0329828
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0328607
WAC WW domain containing adaptor with coiled-coil -0.0328086
TAOK3 TAO kinase 3 -0.0328052
FOXO3 forkhead box O3 -0.0318873
CYRIB CYFIP related Rac1 interactor B -0.0317969
BBX bobby sox homolog (Drosophila) -0.0317396
MIS18BP1 MIS18 binding protein 1 -0.0316907
ABLIM1 actin binding LIM protein 1 -0.0310523
TCF12 transcription factor 12 -0.0309974
PARD3 par-3 family cell polarity regulator -0.0307417
EVI5 ecotropic viral integration site 5 -0.0305742
PTBP3 polypyrimidine tract binding protein 3 -0.0303758
LMTK2 lemur tyrosine kinase 2 -0.0303305
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0300363
PIAS1 protein inhibitor of activated STAT, 1 -0.0300337
RPS25 ribosomal protein S25 -0.0299754
RORA RAR-related orphan receptor A -0.029876
NCKAP1 NCK-associated protein 1 -0.0298466
TOP1 topoisomerase (DNA) I -0.0296579
GPATCH8 G patch domain containing 8 -0.0294612
PDIA3 protein disulfide isomerase family A, member 3 -0.0291995