Darinaparsin_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0761475
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0555417
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0527388
TPM3 tropomyosin 3 0.046424
ELL2 elongation factor, RNA polymerase II, 2 0.0453614
MYH9 myosin, heavy chain 9, non-muscle 0.0439484
NAP1L1 nucleosome assembly protein 1-like 1 0.0378678
PDE4D phosphodiesterase 4D, cAMP-specific 0.0363194
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0356536
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0348381
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0340793
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0331357
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0329218
PDLIM5 PDZ and LIM domain 5 0.032665
SFPQ splicing factor proline/glutamine-rich 0.0319364
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0292757
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0287042
HOMER1 homer scaffolding protein 1 0.0271276
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0270051
CHD4 chromodomain helicase DNA binding protein 4 0.0243356
RAD51B RAD51 paralog B 0.02387
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0238519
VCL vinculin 0.0238363
SPAG9 sperm associated antigen 9 0.0228947
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0226967
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0226945
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0225072
TXNRD1 thioredoxin reductase 1 0.0223973
JMJD1C jumonji domain containing 1C 0.0215927
AKAP12 A kinase (PRKA) anchor protein 12 0.0214223
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0213915
KLF6 Kruppel-like factor 6 0.0209043
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0208575
DOCK5 dedicator of cytokinesis 5 0.0208341
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0202189
NCAPG2 non-SMC condensin II complex, subunit G2 0.0199067
IER2 immediate early response 2 0.0198255
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0193853
RIMS2 regulating synaptic membrane exocytosis 2 0.0193254
ASPH aspartate beta-hydroxylase 0.0192403
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0191538
DUSP16 dual specificity phosphatase 16 0.0191514
ZFC3H1 zinc finger, C3H1-type containing 0.0187712
CAPRIN2 caprin family member 2 0.0186554
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0181126
MMP12 matrix metallopeptidase 12 0.0179981
SET SET nuclear proto-oncogene 0.0179534
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0179436
ZSWIM6 zinc finger, SWIM-type containing 6 0.0179365
CALD1 caldesmon 1 0.0179337
LOC102724023 ES1 protein homolog, mitochondrial 0.017882
PLEC plectin 0.0176313
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0175389
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0174583
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0172813
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0171628
SRSF5 serine/arginine-rich splicing factor 5 0.0170161
NASP nuclear autoantigenic sperm protein (histone-binding) 0.0169794
DST dystonin 0.0167737
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0165689
NRG1 neuregulin 1 0.016554
STC1 stanniocalcin 1 0.0165298
SON SON DNA binding protein 0.0164902
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0162898
EIF4A1 eukaryotic translation initiation factor 4A1 0.0162447
TRIO trio Rho guanine nucleotide exchange factor 0.0158222
MARCHF4 membrane associated ring-CH-type finger 4 0.0157793
BIRC2 baculoviral IAP repeat containing 2 0.0157072
PABPN1 poly(A) binding protein, nuclear 1 0.0156634
TNIP1 TNFAIP3 interacting protein 1 0.015639
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0156387
TCIM transcriptional and immune response regulator 0.015492
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0153723
R3HDM2 R3H domain containing 2 0.0153424
AKAP13 A kinase (PRKA) anchor protein 13 0.0153416
NSUN6 NOP2/Sun domain family, member 6 0.0152531
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0152282
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0151712
SAFB scaffold attachment factor B 0.0150349
RBM28 RNA binding motif protein 28 0.0149562
TPM2 tropomyosin 2 (beta) 0.0147153
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.014527
CTTN cortactin 0.0145012
MYO10 myosin X 0.014378
SYAP1 synapse associated protein 1 0.0143445
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0143434
FANCI Fanconi anemia, complementation group I 0.0143425
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.014318
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.014223
KLF10 Kruppel-like factor 10 0.01412
CLIP1 CAP-GLY domain containing linker protein 1 0.0139223
CSNK1A1 casein kinase 1, alpha 1 0.0137612
DIAPH1 diaphanous-related formin 1 0.0136883
MYPN myopalladin 0.013681
FLNA filamin A, alpha 0.0136372
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0135127
NUMA1 nuclear mitotic apparatus protein 1 0.0135082
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0134588
SAP30BP SAP30 binding protein 0.0134423
RRM2 ribonucleotide reductase M2 0.0133947

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.518216
EGR1 early growth response 1 -0.0829943
TMSB10 thymosin beta 10 -0.0716054
VIM vimentin -0.0684546
RPL35A ribosomal protein L35a -0.0633785
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0560653
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0558054
RPS8 ribosomal protein S8 -0.0553424
RPLP1 ribosomal protein, large, P1 -0.0534276
RPL37 ribosomal protein L37 -0.0531105
RPS6 ribosomal protein S6 -0.0523417
OSMR oncostatin M receptor -0.0515553
POTEF POTE ankyrin domain family, member F -0.0505266
RPS27 ribosomal protein S27 -0.0470738
RPS15 ribosomal protein S15 -0.0467882
RPL12 ribosomal protein L12 -0.0462627
TAS2R14 taste receptor, type 2, member 14 -0.0449927
YBX1 Y box binding protein 1 -0.0449568
RPL23 ribosomal protein L23 -0.0416785
PTMA prothymosin, alpha -0.0404126
RPLP0 ribosomal protein, large, P0 -0.0399863
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0392695
RPL5 ribosomal protein L5 -0.0384608
RPL19 ribosomal protein L19 -0.0383091
RPL38 ribosomal protein L38 -0.036549
FTH1 ferritin, heavy polypeptide 1 -0.0364108
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0358986
RPL34 ribosomal protein L34 -0.0355064
PYGL phosphorylase, glycogen, liver -0.0354671
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0349653
FTL ferritin, light polypeptide -0.0340096
RPS21 ribosomal protein S21 -0.0339952
TM4SF1 transmembrane 4 L six family member 1 -0.0335706
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0330033
PFN1 profilin 1 -0.0324634
RPS29 ribosomal protein S29 -0.032463
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0321949
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0321635
TAPBP TAP binding protein (tapasin) -0.0316292
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0315448
S100A10 S100 calcium binding protein A10 -0.0314671
RPL37A ribosomal protein L37a -0.0314299
ZBTB20 zinc finger and BTB domain containing 20 -0.0313347
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0313292
RPL32 ribosomal protein L32 -0.0310031
RPLP2 ribosomal protein, large, P2 -0.0307579
AFF3 AF4/FMR2 family, member 3 -0.0305617
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0298122
KTN1 kinectin 1 (kinesin receptor) -0.0297171
RPL31 ribosomal protein L31 -0.0294766
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0293507
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0291967
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0288374
LOC112694756 uncharaterized LOC112694756 -0.028797
ENO1 enolase 1, (alpha) -0.0284499
RPS13 ribosomal protein S13 -0.0283103
RPL8 ribosomal protein L8 -0.0281395
ATXN1 ataxin 1 -0.0280142
RPL28 ribosomal protein L28 -0.0278226
RPL9 ribosomal protein L9 -0.0278214
EEF2 eukaryotic translation elongation factor 2 -0.0277512
RACK1 receptor for activated C kinase 1 -0.0276797
RPS10 ribosomal protein S10 -0.0270736
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0268138
MBD5 methyl-CpG binding domain protein 5 -0.0267868
PRKCE protein kinase C, epsilon -0.026502
RPS19 ribosomal protein S19 -0.0264765
RPL35 ribosomal protein L35 -0.0264742
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0263237
MKI67 marker of proliferation Ki-67 -0.0260969
EEF1G eukaryotic translation elongation factor 1 gamma -0.0260276
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.025799
SEPTIN7 septin 7 -0.0256257
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0254819
PRRC2B proline-rich coiled-coil 2B -0.0254124
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0253888
PRH1 proline-rich protein HaeIII subfamily 1 -0.0252796
RPL11 ribosomal protein L11 -0.0249721
RPS14 ribosomal protein S14 -0.024648
EIF1 eukaryotic translation initiation factor 1 -0.0246359
PKM pyruvate kinase, muscle -0.0244599
RPS16 ribosomal protein S16 -0.0239331
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0235763
PFKP phosphofructokinase, platelet -0.0235593
MCL1 myeloid cell leukemia 1 -0.0233673
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0232702
RPS23 ribosomal protein S23 -0.0231717
TAOK1 TAO kinase 1 -0.0229755
EGFR epidermal growth factor receptor -0.0228928
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0227299
RPL27 ribosomal protein L27 -0.0227054
RPL26 ribosomal protein L26 -0.0226237
TLK1 tousled-like kinase 1 -0.0225931
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0225342
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.02253
PDIA3 protein disulfide isomerase family A, member 3 -0.0222421
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0222397
RPS25 ribosomal protein S25 -0.0222115
RTN4 reticulon 4 -0.0221612
HLA-B major histocompatibility complex, class I, B -0.0221329