Darinaparsin_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.162564
PM20D1 peptidase M20 domain containing 1 0.151772
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.139175
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0922077
PRKN parkin RBR E3 ubiquitin protein ligase 0.0838841
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0753076
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0737037
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.069891
NAP1L1 nucleosome assembly protein 1-like 1 0.0684441
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0673011
MYOF myoferlin 0.0651962
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0629218
PDE10A phosphodiesterase 10A 0.06265
BZW1 basic leucine zipper and W2 domains 1 0.0573574
NALF1 NALCN channel auxiliary factor 1 0.0562829
ENO1 enolase 1, (alpha) 0.0513373
SMOC1 SPARC related modular calcium binding 1 0.0508463
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0496159
SMAD2 SMAD family member 2 0.049537
ASPH aspartate beta-hydroxylase 0.048863
PRELID2 PRELI domain containing 2 0.0481467
SQSTM1 sequestosome 1 0.0478803
PTPRM protein tyrosine phosphatase, receptor type, M 0.0478046
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0472547
TPT1 tumor protein, translationally-controlled 1 0.0467325
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0459395
RGS2 regulator of G-protein signaling 2 0.0442111
RAD51B RAD51 paralog B 0.044158
SH3KBP1 SH3-domain kinase binding protein 1 0.0432738
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0426299
P3H2 prolyl 3-hydroxylase 2 0.0418745
ZSWIM6 zinc finger, SWIM-type containing 6 0.0411755
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0405712
VCL vinculin 0.0395584
CXCL8 chemokine (C-X-C motif) ligand 8 0.038138
INTS6 integrator complex subunit 6 0.0375603
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0361851
LDHA lactate dehydrogenase A 0.0361073
CADM2 cell adhesion molecule 2 0.0358435
AKAP12 A kinase (PRKA) anchor protein 12 0.0350133
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0341869
DST dystonin 0.0337391
LSAMP limbic system-associated membrane protein 0.0336844
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0316281
EZR ezrin 0.0315562
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0309683
FMNL2 formin-like 2 0.0306829
EIF4A1 eukaryotic translation initiation factor 4A1 0.0306147
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0305512
CTIF CBP80/20-dependent translation initiation factor 0.0304685
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0302214
MYH9 myosin, heavy chain 9, non-muscle 0.0302177
GRAMD1B GRAM domain containing 1B 0.0300851
WWOX WW domain containing oxidoreductase 0.0299265
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0297838
FBXL7 F-box and leucine-rich repeat protein 7 0.0297382
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0294442
AGTPBP1 ATP/GTP binding protein 1 0.0291688
TPM3 tropomyosin 3 0.029019
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0288497
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0288178
IRS2 insulin receptor substrate 2 0.0287384
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0282176
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0274516
HSPA8 heat shock 70kDa protein 8 0.0272797
NRXN3 neurexin 3 0.0269511
ACTG1 actin gamma 1 0.0264983
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.026423
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0259619
SET SET nuclear proto-oncogene 0.0258091
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0257964
COL8A1 collagen, type VIII, alpha 1 0.0255202
PKM pyruvate kinase, muscle 0.0252478
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0252472
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0251653
CENPF centromere protein F, 350/400kDa 0.0248134
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0247046
EEF2 eukaryotic translation elongation factor 2 0.0245465
ANTXR1 anthrax toxin receptor 1 0.0245307
ADARB1 adenosine deaminase, RNA-specific, B1 0.024264
ANXA1 annexin A1 0.0242308
SRRM2 serine/arginine repetitive matrix 2 0.0239153
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 0.0238918
AHNAK AHNAK nucleoprotein 0.0238497
ESYT2 extended synaptotagmin-like protein 2 0.0235349
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.023534
FLNA filamin A, alpha 0.0235103
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0235101
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0232854
RPS4X ribosomal protein S4, X-linked 0.0230757
PGK1 phosphoglycerate kinase 1 0.0228627
RRM2 ribonucleotide reductase M2 0.0227215
STAG2 stromal antigen 2 0.0223385
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0219359
GALC galactosylceramidase 0.021888
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.0215639
GLCE glucuronic acid epimerase 0.0214124
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0212493
BASP1 brain abundant, membrane attached signal protein 1 0.0210771
TPI1 triosephosphate isomerase 1 0.0210708

decreased expression

Symbol Name Standardized Value
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.160348
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.150774
FN1 fibronectin 1 -0.14386
EFNA5 ephrin-A5 -0.12251
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.111266
IGFBP3 insulin-like growth factor binding protein 3 -0.106636
GDA guanine deaminase -0.0966991
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0898552
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.086904
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0747042
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0691983
FTH1 ferritin, heavy polypeptide 1 -0.0679564
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0666972
MFF mitochondrial fission factor -0.0643387
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0602162
RTN4 reticulon 4 -0.0601115
OSMR oncostatin M receptor -0.0584417
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0581352
WARS1 tryptophanyl-tRNA synthetase 1 -0.0538543
FNDC3A fibronectin type III domain containing 3A -0.0524639
FNDC3B fibronectin type III domain containing 3B -0.0517335
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0515728
NEK7 NIMA-related kinase 7 -0.0513678
TGFBI transforming growth factor, beta-induced, 68kDa -0.0503778
LIMCH1 LIM and calponin homology domains 1 -0.0491799
ADGRD1 adhesion G protein-coupled receptor D1 -0.0475292
COL4A6 collagen, type IV, alpha 6 -0.0473005
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0453143
TBXT T-box transcription factor T -0.0446205
TM4SF1 transmembrane 4 L six family member 1 -0.044583
TMX4 thioredoxin-related transmembrane protein 4 -0.0431121
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0419157
SAMD4A sterile alpha motif domain containing 4A -0.0419128
VMP1 vacuole membrane protein 1 -0.0412897
TFPI2 tissue factor pathway inhibitor 2 -0.0405194
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0403374
NPAS2 neuronal PAS domain protein 2 -0.0398893
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0391791
ZEB2 zinc finger E-box binding homeobox 2 -0.0387833
ELL2 elongation factor, RNA polymerase II, 2 -0.037919
SRPK2 SRSF protein kinase 2 -0.0375165
CTNND2 catenin (cadherin-associated protein), delta 2 -0.0368943
BMERB1 bMERB domain containing 1 -0.0367442
MCL1 myeloid cell leukemia 1 -0.0361872
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0360382
P4HB prolyl 4-hydroxylase, beta polypeptide -0.03584
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0344936
RPS6 ribosomal protein S6 -0.0342944
CREB5 cAMP responsive element binding protein 5 -0.0339963
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0326084
ANKRD28 ankyrin repeat domain 28 -0.0325408
RTN1 reticulon 1 -0.0312085
VIM vimentin -0.0310361
AVL9 AVL9 homolog (S. cerevisiase) -0.0308134
CD109 CD109 molecule -0.0302266
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.030196
DPYD dihydropyrimidine dehydrogenase -0.0299893
COL4A5 collagen, type IV, alpha 5 -0.0297909
PTEN phosphatase and tensin homolog -0.0290326
AGFG1 ArfGAP with FG repeats 1 -0.02891
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0288522
RPS27 ribosomal protein S27 -0.0288495
CARD16 caspase recruitment domain family, member 16 -0.0288405
MON2 MON2 homolog (S. cerevisiae) -0.0282709
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.028061
JMJD1C jumonji domain containing 1C -0.0274871
HLA-A major histocompatibility complex, class I, A -0.0268748
TENM3 teneurin transmembrane protein 3 -0.0267451
STEAP1B STEAP family member 1B -0.026641
CD44 CD44 molecule (Indian blood group) -0.0265597
NRCAM neuronal cell adhesion molecule -0.0261656
TXNRD1 thioredoxin reductase 1 -0.0260666
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0258214
NCKAP5 NCK-associated protein 5 -0.0256
ENAH enabled homolog (Drosophila) -0.0255429
POTEF POTE ankyrin domain family, member F -0.0254703
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0252698
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0246853
IL6 interleukin 6 -0.0246222
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0246119
BIRC6 baculoviral IAP repeat containing 6 -0.0245465
BCAS3 breast carcinoma amplified sequence 3 -0.0244781
ITPRID2 ITPR interacting domain containing 2 -0.0240719
PTGR1 prostaglandin reductase 1 -0.0237091
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0233928
GOLGA4 golgin A4 -0.0233078
ABLIM1 actin binding LIM protein 1 -0.0231767
EGR1 early growth response 1 -0.0226214
RPLP1 ribosomal protein, large, P1 -0.0225031
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0219472
CDK17 cyclin-dependent kinase 17 -0.0218935
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.021827
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.021734
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0216177
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0215364
CCL5 chemokine (C-C motif) ligand 5 -0.021431
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0213656
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0213154
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0212354
PICALM phosphatidylinositol binding clathrin assembly protein -0.0211438