Darinaparsin_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Darinaparsin perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Darinaparsin_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0487785
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0397034
DSCAM Down syndrome cell adhesion molecule 0.0316697
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0306637
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0292281
MYH9 myosin, heavy chain 9, non-muscle 0.0283082
PCLO piccolo presynaptic cytomatrix protein 0.0252394
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0246565
ISG15 ISG15 ubiquitin-like modifier 0.0243948
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.023078
DOCK5 dedicator of cytokinesis 5 0.0224936
CENPE centromere protein E, 312kDa 0.0224031
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0222193
SAMD4A sterile alpha motif domain containing 4A 0.0215978
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0211272
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0206705
TMSB4X thymosin beta 4, X-linked 0.0202893
OSBPL10 oxysterol binding protein-like 10 0.0202248
IFIH1 interferon induced with helicase C domain 1 0.0198948
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0197141
PTMA prothymosin, alpha 0.0196891
HSPA8 heat shock 70kDa protein 8 0.0193369
SON SON DNA binding protein 0.0185834
AKAP9 A kinase (PRKA) anchor protein 9 0.0182381
FILIP1 filamin A interacting protein 1 0.0178188
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0178166
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0175809
CUL4B cullin 4B 0.0174646
VCL vinculin 0.0174638
CDH8 cadherin 8, type 2 0.0172219
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0168387
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0167377
BRD2 bromodomain containing 2 0.0166714
GOLGB1 golgin B1 0.0163724
MT2A metallothionein 2A 0.0162071
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 0.0159761
CEP250 centrosomal protein 250kDa 0.0158962
BRCC3 BRCA1/BRCA2-containing complex, subunit 3 0.0157893
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.015713
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0154014
FGF13 fibroblast growth factor 13 0.0153918
ICE1 interactor of little elongation complex ELL subunit 1 0.0151403
TENM2 teneurin transmembrane protein 2 0.0150575
HSPH1 heat shock 105kDa/110kDa protein 1 0.0149953
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0149813
MAP2K4 mitogen-activated protein kinase kinase 4 0.0147986
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0146702
MSN moesin 0.0146612
ZNF217 zinc finger protein 217 0.0146352
CKAP5 cytoskeleton associated protein 5 0.0145626
IP6K1 inositol hexakisphosphate kinase 1 0.0144049
WDPCP WD repeat containing planar cell polarity effector 0.0140831
CDC14A cell division cycle 14A 0.0140576
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0139894
PYGL phosphorylase, glycogen, liver 0.013959
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.0137055
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0135612
NCOA7 nuclear receptor coactivator 7 0.0135309
DIAPH3 diaphanous-related formin 3 0.013499
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0134864
PSD3 pleckstrin and Sec7 domain containing 3 0.0133696
RIGI RNA sensor RIG-I 0.0132866
USP26 ubiquitin specific peptidase 26 0.013188
BTBD3 BTB (POZ) domain containing 3 0.0131566
WDR75 WD repeat domain 75 0.0131394
PDE10A phosphodiesterase 10A 0.0131177
OASL 2'-5'-oligoadenylate synthetase-like 0.01309
KNTC1 kinetochore associated 1 0.0130357
AHNAK2 AHNAK nucleoprotein 2 0.0129171
RFC3 replication factor C (activator 1) 3, 38kDa 0.0128988
ELP4 elongator acetyltransferase complex subunit 4 0.0128787
FAM219A family with sequence similarity 219, member A 0.0128777
CKAP2 cytoskeleton associated protein 2 0.0128697
ARHGAP26 Rho GTPase activating protein 26 0.0127401
MEF2C myocyte enhancer factor 2C 0.0127031
IRF1 interferon regulatory factor 1 0.0126632
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.01262
UTRN utrophin 0.0125893
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0125041
CLSPN claspin 0.0124766
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.0124094
NONO non-POU domain containing, octamer-binding 0.0123495
TMCO3 transmembrane and coiled-coil domains 3 0.0123381
INTS6 integrator complex subunit 6 0.0123173
LMO7 LIM domain 7 0.0123146
UBN2 ubinuclein 2 0.012299
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0122738
RBM26 RNA binding motif protein 26 0.0122637
SMAD6 SMAD family member 6 0.012252
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 0.0122395
INTS4 integrator complex subunit 4 0.0122217
SRSF9 serine/arginine-rich splicing factor 9 0.0122061
ANKLE2 ankyrin repeat and LEM domain containing 2 0.0120969
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0120667
RPSA ribosomal protein SA 0.0120552
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0119908
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0119215
ZNF146 zinc finger protein 146 0.0119176
PROC protein C (inactivator of coagulation factors Va and VIIIa) 0.0119079
GATAD2A GATA zinc finger domain containing 2A 0.0118954

decreased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 -0.139628
VIM vimentin -0.107167
FNDC3B fibronectin type III domain containing 3B -0.0957105
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0897158
ITGAV integrin, alpha V -0.0895148
PARD3B par-3 family cell polarity regulator beta -0.0854714
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0813295
CADM2 cell adhesion molecule 2 -0.0795723
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0780151
PRTG protogenin -0.0744679
SRP54 signal recognition particle 54kDa -0.0715161
ZFAND3 zinc finger, AN1-type domain 3 -0.0705084
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0697047
TSC22D2 TSC22 domain family, member 2 -0.0683713
SNX6 sorting nexin 6 -0.068226
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0631925
ADGRL2 adhesion G protein-coupled receptor L2 -0.0618082
COL1A2 collagen, type I, alpha 2 -0.0616957
MDK midkine (neurite growth-promoting factor 2) -0.0609536
LRRC4C leucine rich repeat containing 4C -0.0567506
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0560239
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0558648
NCAM2 neural cell adhesion molecule 2 -0.0548173
PGK1 phosphoglycerate kinase 1 -0.0540871
ENAH enabled homolog (Drosophila) -0.0536018
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0515425
RPS8 ribosomal protein S8 -0.0514552
RPS6 ribosomal protein S6 -0.0507387
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0500667
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0498874
PFN1 profilin 1 -0.0480571
KPNB1 karyopherin (importin) beta 1 -0.0475081
WASF2 WAS protein family, member 2 -0.0471077
PHIP pleckstrin homology domain interacting protein -0.0470507
WSB1 WD repeat and SOCS box containing 1 -0.0470261
PUM1 pumilio RNA-binding family member 1 -0.0465668
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0465476
HSPB1 heat shock 27kDa protein 1 -0.0451462
TMSB10 thymosin beta 10 -0.0444602
ANK2 ankyrin 2, neuronal -0.0442371
KMT2E lysine (K)-specific methyltransferase 2E -0.0440999
ZNF292 zinc finger protein 292 -0.0438586
GARS1 glycyl-tRNA synthetase 1 -0.043709
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0418221
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0413504
RPS16 ribosomal protein S16 -0.0413306
PLPP1 phospholipid phosphatase 1 -0.0410914
PPP4R1 protein phosphatase 4, regulatory subunit 1 -0.0410138
RERE arginine-glutamic acid dipeptide (RE) repeats -0.040901
RLF rearranged L-myc fusion -0.0402625
ATP5F1B ATP synthase F1 subunit beta -0.0402155
MEIS2 Meis homeobox 2 -0.0396474
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0392195
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.039142
RPL5 ribosomal protein L5 -0.0384197
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0383896
RTN4 reticulon 4 -0.0380413
THOC2 THO complex 2 -0.0378571
BIRC6 baculoviral IAP repeat containing 6 -0.0370161
TOX thymocyte selection-associated high mobility group box -0.0369037
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0367906
ADAM9 ADAM metallopeptidase domain 9 -0.0366125
PRRC2C proline-rich coiled-coil 2C -0.0359002
SRPK2 SRSF protein kinase 2 -0.035653
SORBS2 sorbin and SH3 domain containing 2 -0.0355381
PCBP2 poly(rC) binding protein 2 -0.0354367
UBE2K ubiquitin-conjugating enzyme E2K -0.0353162
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0352404
H3-3B H3.3 histone B -0.0351698
RPL35A ribosomal protein L35a -0.0344933
CALR calreticulin -0.0344558
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0340602
UPP1 uridine phosphorylase 1 -0.034045
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0334519
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0332329
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0330487
TNRC6B trinucleotide repeat containing 6B -0.0329894
TUBA1B tubulin, alpha 1b -0.0324667
GPC3 glypican 3 -0.0320353
TENM3 teneurin transmembrane protein 3 -0.0319533
ATXN2 ataxin 2 -0.0316115
EVI5 ecotropic viral integration site 5 -0.0314387
FBXO17 F-box protein 17 -0.0313808
KDM3A lysine (K)-specific demethylase 3A -0.0310887
CHD1 chromodomain helicase DNA binding protein 1 -0.0308178
TCF12 transcription factor 12 -0.0304662
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0302376
PDIA3 protein disulfide isomerase family A, member 3 -0.0301323
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0300989
TRIO trio Rho guanine nucleotide exchange factor -0.0299081
POTEF POTE ankyrin domain family, member F -0.0299016
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 -0.0297831
RPLP1 ribosomal protein, large, P1 -0.0297627
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0297147
NPEPPS aminopeptidase puromycin sensitive -0.0293921
RBM39 RNA binding motif protein 39 -0.0291985
WDR43 WD repeat domain 43 -0.0290199
RPL11 ribosomal protein L11 -0.0289038
CAMTA1 calmodulin binding transcription activator 1 -0.0287493
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0287385