Decitabine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Decitabine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Decitabine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.209492
LOC112694756 uncharaterized LOC112694756 0.166363
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.162866
EEF2 eukaryotic translation elongation factor 2 0.160577
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.134123
ERRFI1 ERBB receptor feedback inhibitor 1 0.119958
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.10256
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.102485
TMSB4X thymosin beta 4, X-linked 0.0934688
AHNAK AHNAK nucleoprotein 0.0927925
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0898452
TXNRD1 thioredoxin reductase 1 0.0835683
SLC38A2 solute carrier family 38, member 2 0.0806117
RPL3 ribosomal protein L3 0.0750668
POTEF POTE ankyrin domain family, member F 0.070607
PGK1 phosphoglycerate kinase 1 0.067935
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0668603
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0658823
RAI1 retinoic acid induced 1 0.060891
MYH9 myosin, heavy chain 9, non-muscle 0.0603751
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0588542
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0578238
SPAG9 sperm associated antigen 9 0.0576112
LDHA lactate dehydrogenase A 0.0563918
CANX calnexin 0.0558868
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0541838
CENPF centromere protein F, 350/400kDa 0.0541645
EZR ezrin 0.0540061
TM4SF1 transmembrane 4 L six family member 1 0.0539421
HOOK2 hook microtubule-tethering protein 2 0.0519037
APP amyloid beta (A4) precursor protein 0.0517059
UBC ubiquitin C 0.04929
MKI67 marker of proliferation Ki-67 0.0484053
MACF1 microtubule-actin crosslinking factor 1 0.0471709
ARRDC3 arrestin domain containing 3 0.04598
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0456646
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0450447
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0441152
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.044067
KMT2E lysine (K)-specific methyltransferase 2E 0.0431353
TRIP12 thyroid hormone receptor interactor 12 0.0424641
RTN4 reticulon 4 0.0423688
PKM pyruvate kinase, muscle 0.0419285
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0417843
HSPA8 heat shock 70kDa protein 8 0.0414486
KDM3A lysine (K)-specific demethylase 3A 0.0414167
HDLBP high density lipoprotein binding protein 0.0413225
CSDE1 cold shock domain containing E1, RNA-binding 0.0408735
ENO1 enolase 1, (alpha) 0.0398155
SET SET nuclear proto-oncogene 0.0397001
NUP58 nucleoporin 58 0.0396626
PRRC2C proline-rich coiled-coil 2C 0.0394109
EREG epiregulin 0.0392823
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0388878
ADAM17 ADAM metallopeptidase domain 17 0.0388066
MATR3 matrin 3 0.0386991
TPI1 triosephosphate isomerase 1 0.038219
NAMPT nicotinamide phosphoribosyltransferase 0.0380422
OGA O-GlcNAcase 0.0379703
WDR45B WD repeat domain 45B 0.0378937
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0366886
CKAP5 cytoskeleton associated protein 5 0.0360932
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0357387
EIF4H eukaryotic translation initiation factor 4H 0.0356881
TOP1 topoisomerase (DNA) I 0.035565
VIM vimentin 0.035388
FLNB filamin B, beta 0.0351934
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0348925
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0347991
XPO1 exportin 1 0.0347128
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0345113
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0343781
EIF4A1 eukaryotic translation initiation factor 4A1 0.033611
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0335866
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0331284
PLK2 polo-like kinase 2 0.0323227
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0321047
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0320562
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0318893
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0313499
KLF6 Kruppel-like factor 6 0.031143
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0310409
PLEC plectin 0.0310176
FXR1 fragile X mental retardation, autosomal homolog 1 0.0308182
GARS1 glycyl-tRNA synthetase 1 0.03014
ANLN anillin, actin binding protein 0.02981
EMP1 epithelial membrane protein 1 0.0297791
ADAM9 ADAM metallopeptidase domain 9 0.0297603
GOLGA4 golgin A4 0.0297358
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0296985
SEPTIN7 septin 7 0.0296917
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0296005
KTN1 kinectin 1 (kinesin receptor) 0.0295759
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0295347
ADAR adenosine deaminase, RNA-specific 0.0291612
SRRM2 serine/arginine repetitive matrix 2 0.0290875
ILF3 interleukin enhancer binding factor 3, 90kDa 0.0288373
YBX1 Y box binding protein 1 0.0286777
TMEM123 transmembrane protein 123 0.028013
WAC WW domain containing adaptor with coiled-coil 0.0278935

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.183531
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.122576
PSD3 pleckstrin and Sec7 domain containing 3 -0.115086
CADM2 cell adhesion molecule 2 -0.105506
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0914168
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0735189
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0710745
MT2A metallothionein 2A -0.0653661
TNS3 tensin 3 -0.0632667
DST dystonin -0.0615542
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.060158
EHBP1 EH domain binding protein 1 -0.0585586
TMSB10 thymosin beta 10 -0.0569897
TSC22D1 TSC22 domain family, member 1 -0.0560646
CSMD3 CUB and Sushi multiple domains 3 -0.0558374
DPYD dihydropyrimidine dehydrogenase -0.0535731
CFAP299 cilia and flagella associated protein 299 -0.0515417
PDE10A phosphodiesterase 10A -0.0476549
EPHA4 EPH receptor A4 -0.0473794
EFNA5 ephrin-A5 -0.0450116
RPS19 ribosomal protein S19 -0.0447921
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0428146
SP100 SP100 nuclear antigen -0.0427885
RPL37A ribosomal protein L37a -0.0426569
PRELID2 PRELI domain containing 2 -0.0424804
EXOC4 exocyst complex component 4 -0.042028
HDAC9 histone deacetylase 9 -0.0409843
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0399066
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.03961
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0388308
HLA-B major histocompatibility complex, class I, B -0.0386887
RPS8 ribosomal protein S8 -0.0374687
NPAS2 neuronal PAS domain protein 2 -0.0363559
RIGI RNA sensor RIG-I -0.0361128
RAD51B RAD51 paralog B -0.0346475
FTL ferritin, light polypeptide -0.0342127
RPL36 ribosomal protein L36 -0.0340933
RPL31 ribosomal protein L31 -0.0339536
PLSCR1 phospholipid scramblase 1 -0.0324142
DLG1 discs, large homolog 1 (Drosophila) -0.0322964
LPP LIM domain containing preferred translocation partner in lipoma -0.0307851
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0300918
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0294223
RPLP2 ribosomal protein, large, P2 -0.0290788
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0289105
EGFR epidermal growth factor receptor -0.0288318
CD44 CD44 molecule (Indian blood group) -0.0286972
INTS6 integrator complex subunit 6 -0.0276643
IFIH1 interferon induced with helicase C domain 1 -0.0272867
MBD5 methyl-CpG binding domain protein 5 -0.0271996
RPS29 ribosomal protein S29 -0.0270467
DPH6 diphthamine biosynthesis 6 -0.0268542
KDM4C lysine (K)-specific demethylase 4C -0.0268174
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0265059
WDR27 WD repeat domain 27 -0.0252143
RPL26 ribosomal protein L26 -0.0251623
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0247578
RPS12 ribosomal protein S12 -0.0246215
PTMA prothymosin, alpha -0.0241771
RNF213 ring finger protein 213 -0.0239156
BICD1 bicaudal D homolog 1 (Drosophila) -0.0237754
RPS3 ribosomal protein S3 -0.0236022
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0233287
ZBTB20 zinc finger and BTB domain containing 20 -0.0232152
SMYD3 SET and MYND domain containing 3 -0.0230145
RPL35A ribosomal protein L35a -0.0226817
AEBP2 AE binding protein 2 -0.0225127
NEK10 NIMA-related kinase 10 -0.0223965
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0220895
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0220567
DENND1A DENN/MADD domain containing 1A -0.0218072
DNAH14 dynein, axonemal, heavy chain 14 -0.0216383
DNER delta/notch-like EGF repeat containing -0.0213208
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -0.0211922
RPS23 ribosomal protein S23 -0.0211001
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0208627
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0206788
WARS1 tryptophanyl-tRNA synthetase 1 -0.0203367
SDK1 sidekick cell adhesion molecule 1 -0.0203217
TPRG1 tumor protein p63 regulated 1 -0.020277
RUNX1 runt-related transcription factor 1 -0.0202692
PMP22 peripheral myelin protein 22 -0.0202473
CMIP c-Maf inducing protein -0.0202427
MYO9A myosin IXA -0.0202366
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0201832
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0192909
CUX1 cut-like homeobox 1 -0.0192731
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0190179
RPL28 ribosomal protein L28 -0.0183408
PATJ PATJ crumbs cell polarity complex component -0.0183277
ENO2 enolase 2 (gamma, neuronal) -0.0183266
VEGFC vascular endothelial growth factor C -0.0182995
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.018036
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.01793
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0178489
SLC39A10 solute carrier family 39 (zinc transporter), member 10 -0.0177111
SDCCAG8 serologically defined colon cancer antigen 8 -0.017627
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0175693
SPIDR scaffolding protein involved in DNA repair -0.0172774
TGM2 transglutaminase 2 -0.0171478