Decitabine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Decitabine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Decitabine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.150168
EEF2 eukaryotic translation elongation factor 2 0.102226
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0945541
TM4SF1 transmembrane 4 L six family member 1 0.0901633
RPL3 ribosomal protein L3 0.0785311
TPM3 tropomyosin 3 0.0718261
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0645622
LOC112694756 uncharaterized LOC112694756 0.0640736
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0621225
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0553121
HSPA8 heat shock 70kDa protein 8 0.0551259
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0529812
MYH9 myosin, heavy chain 9, non-muscle 0.052075
PTMA prothymosin, alpha 0.051831
RPL4 ribosomal protein L4 0.0482075
UBC ubiquitin C 0.0481509
RPL23 ribosomal protein L23 0.0480205
FGB fibrinogen beta chain 0.0474103
CALR calreticulin 0.047144
EIF4A1 eukaryotic translation initiation factor 4A1 0.0454948
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0445423
APP amyloid beta (A4) precursor protein 0.0441628
RPL19 ribosomal protein L19 0.0425651
TXNRD1 thioredoxin reductase 1 0.0422354
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0412347
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0409777
PKM pyruvate kinase, muscle 0.0403935
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0392439
FTL ferritin, light polypeptide 0.0388642
PDIA6 protein disulfide isomerase family A, member 6 0.0368944
YBX1 Y box binding protein 1 0.0367251
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0349926
TFPI2 tissue factor pathway inhibitor 2 0.0338548
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0335594
TPI1 triosephosphate isomerase 1 0.0333341
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0332129
RHOA ras homolog family member A 0.0328726
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0325716
RPS27A ribosomal protein S27a 0.0322323
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0321543
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0317177
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0316752
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0309218
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0306515
EEF1G eukaryotic translation elongation factor 1 gamma 0.0305694
HDGF hepatoma-derived growth factor 0.0301628
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0298642
RPS12 ribosomal protein S12 0.0297907
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0296897
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0288689
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0280871
PLEC plectin 0.0280692
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0278089
AHNAK AHNAK nucleoprotein 0.0277649
H1-4 H1.4 linker histone, cluster member 0.0277435
RAD21 RAD21 homolog (S. pombe) 0.0273909
TPX2 TPX2, microtubule-associated 0.0273828
MKI67 marker of proliferation Ki-67 0.0273628
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.026898
ENO1 enolase 1, (alpha) 0.0268257
USP3 ubiquitin specific peptidase 3 0.0267179
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0266034
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0259665
STMN1 stathmin 1 0.0257327
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0256257
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0251956
SLC38A2 solute carrier family 38, member 2 0.0251794
CASC3 cancer susceptibility candidate 3 0.0249756
FLNA filamin A, alpha 0.0246902
HYOU1 hypoxia up-regulated 1 0.0242589
CSDE1 cold shock domain containing E1, RNA-binding 0.0242075
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0240862
KIF5B kinesin family member 5B 0.0240076
TPD52 tumor protein D52 0.023782
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0235676
HDLBP high density lipoprotein binding protein 0.0234702
ATP5F1B ATP synthase F1 subunit beta 0.0232295
SET SET nuclear proto-oncogene 0.0228868
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0227734
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0227357
RRM2 ribonucleotide reductase M2 0.0226327
EIF4A2 eukaryotic translation initiation factor 4A2 0.0225897
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.022575
SPAG5 sperm associated antigen 5 0.022479
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0222796
APLP2 amyloid beta (A4) precursor-like protein 2 0.0222114
RPL7 ribosomal protein L7 0.0219079
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0217585
ANLN anillin, actin binding protein 0.0209399
IQGAP1 IQ motif containing GTPase activating protein 1 0.0208111
RPS18 ribosomal protein S18 0.0207951
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0204846
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.020295
PRPF8 pre-mRNA processing factor 8 0.0202149
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0202073
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0201436
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.019537
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0194216
EIF4H eukaryotic translation initiation factor 4H 0.0193604
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0192967

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.261344
PDE4D phosphodiesterase 4D, cAMP-specific -0.205485
THSD4 thrombospondin, type I, domain containing 4 -0.160893
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.137016
DOCK4 dedicator of cytokinesis 4 -0.102543
IGFBP3 insulin-like growth factor binding protein 3 -0.0787698
FNDC3B fibronectin type III domain containing 3B -0.0753259
CMIP c-Maf inducing protein -0.0722639
SAMD4A sterile alpha motif domain containing 4A -0.0661611
EGFR epidermal growth factor receptor -0.0610443
MT2A metallothionein 2A -0.0606417
BICC1 BicC family RNA binding protein 1 -0.0596078
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0594956
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0592396
SMOC1 SPARC related modular calcium binding 1 -0.0569416
GLIS3 GLIS family zinc finger 3 -0.0567653
PARD3 par-3 family cell polarity regulator -0.0547894
MAML3 mastermind-like 3 (Drosophila) -0.0545902
TMSB10 thymosin beta 10 -0.0539073
IGF2 insulin-like growth factor 2 -0.0531516
PYGL phosphorylase, glycogen, liver -0.0531073
SVIL supervillin -0.053071
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.052787
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0512635
ARHGAP26 Rho GTPase activating protein 26 -0.0508349
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0505104
NEGR1 neuronal growth regulator 1 -0.0501653
BASP1 brain abundant, membrane attached signal protein 1 -0.0494318
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0480887
DST dystonin -0.048042
KYNU kynureninase -0.0477064
USP34 ubiquitin specific peptidase 34 -0.0459884
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.045768
DOCK5 dedicator of cytokinesis 5 -0.0453443
FTH1 ferritin, heavy polypeptide 1 -0.0448089
OSMR oncostatin M receptor -0.043904
EFNA5 ephrin-A5 -0.0423127
EHBP1 EH domain binding protein 1 -0.0421717
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0400754
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0400465
RAD51B RAD51 paralog B -0.039611
TTC28 tetratricopeptide repeat domain 28 -0.0395432
PTPRM protein tyrosine phosphatase, receptor type, M -0.0391526
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0382207
FMNL2 formin-like 2 -0.037648
NAV3 neuron navigator 3 -0.0373603
EGR1 early growth response 1 -0.0367225
UTRN utrophin -0.0350511
NRG1 neuregulin 1 -0.0342081
PM20D1 peptidase M20 domain containing 1 -0.0341123
ATXN1 ataxin 1 -0.0337652
ZBTB20 zinc finger and BTB domain containing 20 -0.0337165
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0335466
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0332388
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0330454
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0327348
PDLIM5 PDZ and LIM domain 5 -0.0320653
BABAM2 BRISC and BRCA1 A complex member 2 -0.0320523
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0315992
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0314055
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0313509
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0312961
EXOC6B exocyst complex component 6B -0.0312919
ALCAM activated leukocyte cell adhesion molecule -0.0312865
HDAC9 histone deacetylase 9 -0.0312158
LPP LIM domain containing preferred translocation partner in lipoma -0.0301353
FOXP1 forkhead box P1 -0.0301223
UBASH3B ubiquitin associated and SH3 domain containing B -0.0299286
NEBL nebulette -0.0297415
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0297037
ERBIN erbb2 interacting protein -0.0293659
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0293147
GSK3B glycogen synthase kinase 3 beta -0.0292002
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0287904
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0275654
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.027469
GRAMD1B GRAM domain containing 1B -0.0272896
PCNX4 pecanex 4 -0.0272005
WWOX WW domain containing oxidoreductase -0.0267422
EXT1 exostosin glycosyltransferase 1 -0.0266362
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0265152
NF1 neurofibromin 1 -0.0265125
NHSL1 NHS-like 1 -0.0262803
TRIO trio Rho guanine nucleotide exchange factor -0.0261447
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0261223
TBC1D5 TBC1 domain family, member 5 -0.0260536
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0260343
CUX1 cut-like homeobox 1 -0.0260321
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0258481
BIRC6 baculoviral IAP repeat containing 6 -0.0258371
PATJ PATJ crumbs cell polarity complex component -0.0254925
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0254845
MSRB3 methionine sulfoxide reductase B3 -0.0253703
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0246884
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0245966
AK1 adenylate kinase 1 -0.0245576
IER3 immediate early response 3 -0.0242564
SLC35F3 solute carrier family 35, member F3 -0.0241183
RAB7A RAB7A, member RAS oncogene family -0.023907
ANKRD12 ankyrin repeat domain 12 -0.0237471