Decitabine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Decitabine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Decitabine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.139882
MKI67 marker of proliferation Ki-67 0.117298
COL3A1 collagen, type III, alpha 1 0.104283
H1-4 H1.4 linker histone, cluster member 0.0974154
COL5A2 collagen, type V, alpha 2 0.0963414
TMSB4X thymosin beta 4, X-linked 0.0926414
COL11A1 collagen, type XI, alpha 1 0.0729295
VIM vimentin 0.0700522
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0681684
EEF2 eukaryotic translation elongation factor 2 0.0651711
LOC112694756 uncharaterized LOC112694756 0.0641987
NACA nascent polypeptide-associated complex alpha subunit 0.0606894
AHNAK AHNAK nucleoprotein 0.0589853
MYH9 myosin, heavy chain 9, non-muscle 0.0562472
RPL3 ribosomal protein L3 0.0561225
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.049627
RPL23 ribosomal protein L23 0.0490673
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0473066
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0456105
ACTG1 actin gamma 1 0.0444681
RPL4 ribosomal protein L4 0.0433206
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0418319
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0411474
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0409822
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0406885
COL1A2 collagen, type I, alpha 2 0.0404501
ENO1 enolase 1, (alpha) 0.0403286
CENPF centromere protein F, 350/400kDa 0.0402948
TPM3 tropomyosin 3 0.0393325
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0392157
MDK midkine (neurite growth-promoting factor 2) 0.0388797
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0388783
STMN1 stathmin 1 0.0388671
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0385165
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0377656
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0370559
CADM2 cell adhesion molecule 2 0.0369671
CKAP2 cytoskeleton associated protein 2 0.0366442
H1-2 H1.2 linker histone, cluster member 0.0364909
LRMDA leucine rich melanocyte differentiation associated 0.0364765
SAMD4A sterile alpha motif domain containing 4A 0.0355096
CALR calreticulin 0.0352245
SLC38A2 solute carrier family 38, member 2 0.0351915
ADGRL2 adhesion G protein-coupled receptor L2 0.0351518
H1-5 H1.5 linker histone, cluster member 0.0349074
DST dystonin 0.034883
TPT1 tumor protein, translationally-controlled 1 0.0346144
RPL11 ribosomal protein L11 0.0343875
CAVIN1 caveolae associated protein 1 0.0342926
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0339857
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0339068
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0338393
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0327029
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 0.0326753
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0325599
SET SET nuclear proto-oncogene 0.032022
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0318795
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0317278
HSPH1 heat shock 105kDa/110kDa protein 1 0.0316969
SKIL SKI-like proto-oncogene 0.0314332
RPS8 ribosomal protein S8 0.0305171
STIP1 stress-induced phosphoprotein 1 0.0301532
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0296109
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0294688
RIGI RNA sensor RIG-I 0.0294563
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0294208
ANXA1 annexin A1 0.029368
HSPA8 heat shock 70kDa protein 8 0.0292514
BZW1 basic leucine zipper and W2 domains 1 0.0291507
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0290958
FLNA filamin A, alpha 0.0290749
SSRP1 structure specific recognition protein 1 0.0290103
SRP72 signal recognition particle 72kDa 0.0289918
AKAP12 A kinase (PRKA) anchor protein 12 0.0286665
NTM neurotrimin 0.0286371
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 0.0284696
LMNA lamin A/C 0.0283289
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0280335
SSR1 signal sequence receptor, alpha 0.0279428
RPLP1 ribosomal protein, large, P1 0.0279419
ATP5F1B ATP synthase F1 subunit beta 0.0277885
SSB Sjogren syndrome antigen B (autoantigen La) 0.0277045
FNDC3A fibronectin type III domain containing 3A 0.0274855
H1-0 H1.0 linker histone 0.0273884
CKAP5 cytoskeleton associated protein 5 0.0272081
ACIN1 apoptotic chromatin condensation inducer 1 0.0270533
B2M beta-2-microglobulin 0.0268276
FOXP2 forkhead box P2 0.0268258
PCDH9 protocadherin 9 0.0266771
RPS12 ribosomal protein S12 0.0262622
NCAPD2 non-SMC condensin I complex, subunit D2 0.0262263
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0262055
SQSTM1 sequestosome 1 0.0261563
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0260978
RPS6 ribosomal protein S6 0.0260883
EIF4H eukaryotic translation initiation factor 4H 0.0259367
CSDE1 cold shock domain containing E1, RNA-binding 0.0258651
CHD4 chromodomain helicase DNA binding protein 4 0.0256359
EEF1G eukaryotic translation elongation factor 1 gamma 0.0253727
SPIRE1 spire-type actin nucleation factor 1 0.0253024

decreased expression

Symbol Name Standardized Value
TSC22D2 TSC22 domain family, member 2 -0.183169
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0836765
ZNF292 zinc finger protein 292 -0.0818166
ZFAND3 zinc finger, AN1-type domain 3 -0.0816445
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0799949
PHIP pleckstrin homology domain interacting protein -0.0776763
PGAP1 post-GPI attachment to proteins 1 -0.0750189
MRPS30 mitochondrial ribosomal protein S30 -0.0720794
STRN3 striatin, calmodulin binding protein 3 -0.0694553
KMT2E lysine (K)-specific methyltransferase 2E -0.0634538
FBXO11 F-box protein 11 -0.0612894
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.061031
ADAM9 ADAM metallopeptidase domain 9 -0.0608368
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.058463
PFN1 profilin 1 -0.0581046
RBM39 RNA binding motif protein 39 -0.0562893
FNDC3B fibronectin type III domain containing 3B -0.0552041
CDC73 cell division cycle 73 -0.0536832
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0528328
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0520817
MTF2 metal response element binding transcription factor 2 -0.0498728
PPP4R1 protein phosphatase 4, regulatory subunit 1 -0.0479688
TBC1D12 TBC1 domain family, member 12 -0.0476642
PRR16 proline rich 16 -0.0475508
PUM2 pumilio RNA-binding family member 2 -0.0468787
RLF rearranged L-myc fusion -0.0451624
URI1 URI1, prefoldin-like chaperone -0.0444373
SETD5 SET domain containing 5 -0.0436598
NCOR1 nuclear receptor corepressor 1 -0.0436419
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0430751
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0419566
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0417787
HDAC9 histone deacetylase 9 -0.0417315
WAC WW domain containing adaptor with coiled-coil -0.0414706
PICALM phosphatidylinositol binding clathrin assembly protein -0.041122
WDR43 WD repeat domain 43 -0.040907
KMT2C lysine (K)-specific methyltransferase 2C -0.0402024
ITGAV integrin, alpha V -0.0394511
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0389489
ACBD3 acyl-CoA binding domain containing 3 -0.0380147
ADGRL3 adhesion G protein-coupled receptor L3 -0.0379314
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0379112
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0374025
MED13L mediator complex subunit 13-like -0.0365073
RHEB Ras homolog enriched in brain -0.0359873
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0355124
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0354262
CXADR coxsackie virus and adenovirus receptor -0.0353592
QKI QKI, KH domain containing, RNA binding -0.0353588
USP3 ubiquitin specific peptidase 3 -0.03531
MARCHF6 membrane associated ring-CH-type finger 6 -0.035193
SOX5 SRY (sex determining region Y)-box 5 -0.0348051
GPC3 glypican 3 -0.0346272
ZMYM2 zinc finger, MYM-type 2 -0.0344253
HELZ helicase with zinc finger -0.0339109
SRP54 signal recognition particle 54kDa -0.0338605
ENAH enabled homolog (Drosophila) -0.0338317
NOP58 NOP58 ribonucleoprotein -0.0334262
PDS5A PDS5 cohesin associated factor A -0.0334057
FAM168A family with sequence similarity 168, member A -0.0332691
DENND4C DENN/MADD domain containing 4C -0.0332036
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0324627
SCAF11 SR-related CTD-associated factor 11 -0.0320026
RAB1A RAB1A, member RAS oncogene family -0.0319647
RBM27 RNA binding motif protein 27 -0.0317723
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0317215
CHD1 chromodomain helicase DNA binding protein 1 -0.0316142
AKAP9 A kinase (PRKA) anchor protein 9 -0.0316066
PLPP1 phospholipid phosphatase 1 -0.0312887
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0310622
VEZT vezatin, adherens junctions transmembrane protein -0.0308613
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 -0.030672
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0305576
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.030465
ARHGAP12 Rho GTPase activating protein 12 -0.0302456
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0301363
CCNL1 cyclin L1 -0.0301137
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.029602
NPR2 natriuretic peptide receptor 2 -0.0294015
TLK2 tousled-like kinase 2 -0.0293053
SMAP1 small ArfGAP 1 -0.0292792
EVI5 ecotropic viral integration site 5 -0.0291861
NHSL1 NHS-like 1 -0.0289319
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0289169
RBM33 RNA binding motif protein 33 -0.0286611
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0285937
TRAM1 translocation associated membrane protein 1 -0.0283173
KDM5B lysine (K)-specific demethylase 5B -0.0281347
RNF13 ring finger protein 13 -0.0278784
SRPK2 SRSF protein kinase 2 -0.0276765
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0276343
TMOD3 tropomodulin 3 (ubiquitous) -0.0273102
GRB2 growth factor receptor-bound protein 2 -0.0272696
FAM171B family with sequence similarity 171, member B -0.0272088
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0269317
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.026925
PRTG protogenin -0.0267091
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0266717
ATXN2 ataxin 2 -0.0265733
MAP4 microtubule-associated protein 4 -0.0264431