Delamanid_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Delamanid perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Delamanid_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.11842
MBNL2 muscleblind-like splicing regulator 2 0.0863064
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0806095
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0666626
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0663923
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0661838
TXNIP thioredoxin interacting protein 0.0656097
B2M beta-2-microglobulin 0.0641014
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0629127
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0616127
RNF149 ring finger protein 149 0.0610279
NDRG1 N-myc downstream regulated 1 0.0566025
CALR calreticulin 0.0560179
TSC22D1 TSC22 domain family, member 1 0.0552351
FTH1 ferritin, heavy polypeptide 1 0.0474458
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0448284
DSCAM Down syndrome cell adhesion molecule 0.0444179
RHOBTB3 Rho-related BTB domain containing 3 0.0443523
SREBF2 sterol regulatory element binding transcription factor 2 0.0443092
SRRM2 serine/arginine repetitive matrix 2 0.0439223
PTBP3 polypyrimidine tract binding protein 3 0.0423589
COPA coatomer protein complex, subunit alpha 0.0415795
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0392927
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0390387
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0389314
ACBD3 acyl-CoA binding domain containing 3 0.0372494
PDIA3 protein disulfide isomerase family A, member 3 0.0367832
MYH9 myosin, heavy chain 9, non-muscle 0.0363491
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0360114
ZMYND8 zinc finger, MYND-type containing 8 0.0359325
IFNGR1 interferon gamma receptor 1 0.0356665
STK24 serine/threonine kinase 24 0.035415
GOLGA2 golgin A2 0.035309
BHLHE40 basic helix-loop-helix family, member e40 0.0349388
TMPRSS4 transmembrane protease, serine 4 0.0348176
BCLAF1 BCL2-associated transcription factor 1 0.034334
HELZ helicase with zinc finger 0.0342125
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0341018
EIF1 eukaryotic translation initiation factor 1 0.0334368
RNF43 ring finger protein 43 0.0333584
FNIP1 folliculin interacting protein 1 0.0332628
PTEN phosphatase and tensin homolog 0.0328728
HLA-B major histocompatibility complex, class I, B 0.0328213
CANX calnexin 0.0323953
ZMYM2 zinc finger, MYM-type 2 0.0319995
UBC ubiquitin C 0.0316858
WDR45B WD repeat domain 45B 0.0310404
NPEPPS aminopeptidase puromycin sensitive 0.0290369
VEGFA vascular endothelial growth factor A 0.0289767
EHF ets homologous factor 0.0284807
TMEM51 transmembrane protein 51 0.0284603
ARGLU1 arginine and glutamate rich 1 0.0282479
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0279048
AKAP9 A kinase (PRKA) anchor protein 9 0.0277809
KMT2E lysine (K)-specific methyltransferase 2E 0.0274572
SEC24D SEC24 family member D 0.0267046
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0265179
TTC3 tetratricopeptide repeat domain 3 0.0264221
SCNN1A sodium channel, non voltage gated 1 alpha subunit 0.0262771
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0262139
OGA O-GlcNAcase 0.0260942
SUCO SUN domain containing ossification factor 0.025944
NRIP1 nuclear receptor interacting protein 1 0.0257006
EEF2 eukaryotic translation elongation factor 2 0.0254763
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0253311
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0250683
RAB6A RAB6A, member RAS oncogene family 0.0247512
MLPH melanophilin 0.0246912
DNM2 dynamin 2 0.02469
FNDC3A fibronectin type III domain containing 3A 0.02466
SAMD4A sterile alpha motif domain containing 4A 0.0245116
COPG1 coatomer protein complex, subunit gamma 1 0.0244648
SFTPA2 surfactant protein A2 0.0243349
COG6 component of oligomeric golgi complex 6 0.0243306
USP3 ubiquitin specific peptidase 3 0.0243203
TMED2 transmembrane emp24 domain trafficking protein 2 0.0242625
MKI67 marker of proliferation Ki-67 0.0240044
ABHD2 abhydrolase domain containing 2 0.0240007
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0238331
PDIA4 protein disulfide isomerase family A, member 4 0.0238053
GOLGA4 golgin A4 0.0237937
KLHL24 kelch-like family member 24 0.0234834
OARD1 O-acyl-ADP-ribose deacylase 1 0.0232821
ZNF148 zinc finger protein 148 0.0232813
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0230956
GOLGB1 golgin B1 0.0230473
PHF3 PHD finger protein 3 0.0228411
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0227638
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0227589
RAB1A RAB1A, member RAS oncogene family 0.0225402
IL20RA interleukin 20 receptor, alpha 0.0224832
CLTC clathrin, heavy chain (Hc) 0.0224321
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0223634
TPR translocated promoter region, nuclear basket protein 0.0222699
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0222582
MACC1 metastasis associated in colon cancer 1 0.0222055
MON2 MON2 homolog (S. cerevisiae) 0.0219966
NCOR2 nuclear receptor corepressor 2 0.0219357
SEC31A SEC31 homolog A (S. cerevisiae) 0.021909
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0218418

decreased expression

Symbol Name Standardized Value
INTS6 integrator complex subunit 6 -0.180851
GMDS GDP-mannose 4,6-dehydratase -0.143596
EPSTI1 epithelial stromal interaction 1 (breast) -0.139635
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.13457
STAT1 signal transducer and activator of transcription 1, 91kDa -0.131187
RNF213 ring finger protein 213 -0.124782
SP100 SP100 nuclear antigen -0.123126
RIGI RNA sensor RIG-I -0.121657
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.117036
STS steroid sulfatase (microsomal), isozyme S -0.110513
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.103982
PLSCR2 phospholipid scramblase 2 -0.0955241
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0919385
NPSR1 neuropeptide S receptor 1 -0.0900334
ANXA2 annexin A2 -0.0875044
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0850914
ARHGAP26 Rho GTPase activating protein 26 -0.0829776
MX2 MX dynamin-like GTPase 2 -0.0810035
MX1 MX dynamin-like GTPase 1 -0.0804867
VCL vinculin -0.0788616
XAF1 XIAP associated factor 1 -0.0779561
GCLC glutamate-cysteine ligase, catalytic subunit -0.0768077
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0736553
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0708638
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0665218
TSHZ2 teashirt zinc finger homeobox 2 -0.0657193
PLSCR1 phospholipid scramblase 1 -0.0639474
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0625608
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0622551
CATSPERB catsper channel auxiliary subunit beta -0.0593962
LMO7 LIM domain 7 -0.058553
TRIO trio Rho guanine nucleotide exchange factor -0.0561196
EXT1 exostosin glycosyltransferase 1 -0.055132
SQSTM1 sequestosome 1 -0.05508
EFNB2 ephrin-B2 -0.0534465
MAML2 mastermind-like 2 (Drosophila) -0.0534155
AREG amphiregulin -0.0533
LYZ lysozyme -0.0530281
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0519069
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0516677
RABGAP1L RAB GTPase activating protein 1-like -0.0510824
TPT1 tumor protein, translationally-controlled 1 -0.0505209
PERP PERP, TP53 apoptosis effector -0.0504718
PRKCA protein kinase C, alpha -0.0497128
LAMA4 laminin, alpha 4 -0.0483422
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0480497
ANKRD10 ankyrin repeat domain 10 -0.0480055
FNDC3B fibronectin type III domain containing 3B -0.0472413
LCN2 lipocalin 2 -0.0467744
RAB7A RAB7A, member RAS oncogene family -0.0461274
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0456649
EGR1 early growth response 1 -0.0453301
NABP1 nucleic acid binding protein 1 -0.0449021
POF1B premature ovarian failure, 1B -0.0433041
C6ORF132 chromosome 6 open reading frame 132 -0.0432567
ASPH aspartate beta-hydroxylase -0.0431777
LPP LIM domain containing preferred translocation partner in lipoma -0.0426098
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0425524
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0417226
TM4SF19 transmembrane 4 L six family member 19 -0.0412666
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0401366
SAMD9 sterile alpha motif domain containing 9 -0.039322
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0382035
RAD51B RAD51 paralog B -0.0377718
NCOA7 nuclear receptor coactivator 7 -0.0373915
FHIT fragile histidine triad -0.0369469
FBXO39 F-box protein 39 -0.0362833
ACTG1 actin gamma 1 -0.0353089
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0352797
TM4SF1 transmembrane 4 L six family member 1 -0.0352175
CEMIP cell migration inducing protein, hyaluronan binding -0.0349294
ATP11A ATPase, class VI, type 11A -0.034925
TJP1 tight junction protein 1 -0.0341177
PMP22 peripheral myelin protein 22 -0.0334762
MSI2 musashi RNA-binding protein 2 -0.03339
IFI6 interferon, alpha-inducible protein 6 -0.0333321
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0330709
CUX1 cut-like homeobox 1 -0.0329975
EPHB2 EPH receptor B2 -0.0323218
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0322818
UBAP2 ubiquitin associated protein 2 -0.0321786
VMP1 vacuole membrane protein 1 -0.0319444
IFIH1 interferon induced with helicase C domain 1 -0.0314097
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0311447
SPIDR scaffolding protein involved in DNA repair -0.0306414
ZBTB20 zinc finger and BTB domain containing 20 -0.0305958
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0301268
SSH2 slingshot protein phosphatase 2 -0.0299758
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0298425
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0294918
PARD3 par-3 family cell polarity regulator -0.0293384
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0285231
NCEH1 neutral cholesterol ester hydrolase 1 -0.0280362
SAMD12 sterile alpha motif domain containing 12 -0.0276896
IGF1R insulin-like growth factor 1 receptor -0.027611
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0273684
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0273194
ETV6 ets variant 6 -0.0272864
ALCAM activated leukocyte cell adhesion molecule -0.0270701
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.0270351