Delamanid_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Delamanid perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Delamanid_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.462159
EEF2 eukaryotic translation elongation factor 2 0.117341
ACTG1 actin gamma 1 0.11392
CALR calreticulin 0.0847112
TPM3 tropomyosin 3 0.0599753
RPS4Y1 ribosomal protein S4, Y-linked 1 0.059031
P4HB prolyl 4-hydroxylase, beta polypeptide 0.056877
AKAP12 A kinase (PRKA) anchor protein 12 0.0526009
SAMD4A sterile alpha motif domain containing 4A 0.0519795
HSPA8 heat shock 70kDa protein 8 0.0517702
FGB fibrinogen beta chain 0.0513351
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.051219
FLNB filamin B, beta 0.0509081
APP amyloid beta (A4) precursor protein 0.0499994
ADM adrenomedullin 0.049525
MYH9 myosin, heavy chain 9, non-muscle 0.0485458
FLNA filamin A, alpha 0.0480222
RPL3 ribosomal protein L3 0.0469049
IGFBP3 insulin-like growth factor binding protein 3 0.046227
CCNL1 cyclin L1 0.0451952
COPA coatomer protein complex, subunit alpha 0.0435194
SRRM2 serine/arginine repetitive matrix 2 0.0416862
MCL1 myeloid cell leukemia 1 0.0396349
FMNL2 formin-like 2 0.03847
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0357839
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0349863
UBASH3B ubiquitin associated and SH3 domain containing B 0.0338041
BRD2 bromodomain containing 2 0.0331295
CMIP c-Maf inducing protein 0.0328102
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0306642
PYGL phosphorylase, glycogen, liver 0.0306535
RPL4 ribosomal protein L4 0.0302972
EEF1G eukaryotic translation elongation factor 1 gamma 0.0299599
ACTN1 actinin, alpha 1 0.0297728
SPAG5 sperm associated antigen 5 0.029507
SMOC1 SPARC related modular calcium binding 1 0.0286664
ANKRD11 ankyrin repeat domain 11 0.0285118
MACF1 microtubule-actin crosslinking factor 1 0.0284996
THBS1 thrombospondin 1 0.0284129
PRPF8 pre-mRNA processing factor 8 0.028155
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0268365
POTEF POTE ankyrin domain family, member F 0.0267671
TMSB4X thymosin beta 4, X-linked 0.0267449
HDGF hepatoma-derived growth factor 0.0266572
EIF4A1 eukaryotic translation initiation factor 4A1 0.0264318
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0264225
PRRC2A proline-rich coiled-coil 2A 0.0256615
RBM8A RNA binding motif protein 8A 0.0255561
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0255446
DDIT4 DNA-damage-inducible transcript 4 0.0250935
HLA-B major histocompatibility complex, class I, B 0.0249074
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0242863
SFTPA2 surfactant protein A2 0.0238261
SEC23A Sec23 homolog A (S. cerevisiae) 0.0234663
SDC4 syndecan 4 0.022706
EIF4B eukaryotic translation initiation factor 4B 0.0220121
SMAD3 SMAD family member 3 0.0218664
KTN1 kinectin 1 (kinesin receptor) 0.0217297
TPM4 tropomyosin 4 0.0213035
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.0210877
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.021048
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0206355
JUN jun proto-oncogene 0.0205172
RPL7A ribosomal protein L7a 0.0203011
CASC3 cancer susceptibility candidate 3 0.0202515
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0201251
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0200499
MSN moesin 0.0198977
EGFR epidermal growth factor receptor 0.0198584
HLA-C major histocompatibility complex, class I, C 0.0196236
MEF2D myocyte enhancer factor 2D 0.0190077
PLEC plectin 0.018977
PTMA prothymosin, alpha 0.0189525
LAMC2 laminin, gamma 2 0.0185171
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0184894
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0182742
EIF4H eukaryotic translation initiation factor 4H 0.0182357
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0181288
APLP2 amyloid beta (A4) precursor-like protein 2 0.0179578
HLA-A major histocompatibility complex, class I, A 0.0178741
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0178592
DCTN1 dynactin 1 0.0177593
ARHGAP26 Rho GTPase activating protein 26 0.0177505
PNN pinin, desmosome associated protein 0.0176493
NDRG1 N-myc downstream regulated 1 0.0175085
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0174763
USP36 ubiquitin specific peptidase 36 0.0173217
THRAP3 thyroid hormone receptor associated protein 3 0.0169931
YBX1 Y box binding protein 1 0.0169718
VEGFA vascular endothelial growth factor A 0.0166952
CCNY cyclin Y 0.0165376
HYOU1 hypoxia up-regulated 1 0.0163236
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0162729
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0160954
ANGPTL4 angiopoietin-like 4 0.0160475
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0159782
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0159613
EGR1 early growth response 1 0.0159189
CTBP2 C-terminal binding protein 2 0.0158743
TMED9 transmembrane emp24 protein transport domain containing 9 0.0157665

decreased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide -0.191123
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.181838
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.153602
TFPI2 tissue factor pathway inhibitor 2 -0.131098
PDE4D phosphodiesterase 4D, cAMP-specific -0.118173
TXNRD1 thioredoxin reductase 1 -0.114697
VIM vimentin -0.0865142
TMSB10 thymosin beta 10 -0.0806659
PM20D1 peptidase M20 domain containing 1 -0.0783316
RPLP1 ribosomal protein, large, P1 -0.0781309
EIF1 eukaryotic translation initiation factor 1 -0.072076
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0696631
RPLP0 ribosomal protein, large, P0 -0.0613008
RPS21 ribosomal protein S21 -0.058852
S100A6 S100 calcium binding protein A6 -0.0544656
TPT1 tumor protein, translationally-controlled 1 -0.0443429
GRAMD1B GRAM domain containing 1B -0.0443396
RPS27A ribosomal protein S27a -0.0426525
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0415681
RPS5 ribosomal protein S5 -0.0406133
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0401507
RPS25 ribosomal protein S25 -0.0400906
PFN1 profilin 1 -0.0396367
IER3 immediate early response 3 -0.039125
RPS12 ribosomal protein S12 -0.0386841
RPS24 ribosomal protein S24 -0.0385844
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0382136
NAP1L1 nucleosome assembly protein 1-like 1 -0.0377042
RPS8 ribosomal protein S8 -0.0376735
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0371838
TM4SF1 transmembrane 4 L six family member 1 -0.0369853
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0362225
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0357628
RAD21 RAD21 homolog (S. pombe) -0.0338218
WWOX WW domain containing oxidoreductase -0.0338014
RPL34 ribosomal protein L34 -0.0337375
RPS2 ribosomal protein S2 -0.0336731
RPL7 ribosomal protein L7 -0.0323064
MT2A metallothionein 2A -0.0320955
RPL30 ribosomal protein L30 -0.0312746
RPS16 ribosomal protein S16 -0.0306724
RPS20 ribosomal protein S20 -0.0305214
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0302843
BICC1 BicC family RNA binding protein 1 -0.0299589
RPL35A ribosomal protein L35a -0.0299022
RPL26 ribosomal protein L26 -0.0296674
AHR aryl hydrocarbon receptor -0.0296028
C15ORF48 chromosome 15 open reading frame 48 -0.029504
NOP58 NOP58 ribonucleoprotein -0.0292091
S100A9 S100 calcium binding protein A9 -0.0289404
RPL23 ribosomal protein L23 -0.0286668
RPL37 ribosomal protein L37 -0.0284698
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0284563
RBM39 RNA binding motif protein 39 -0.0283222
MYL12B myosin, light chain 12B, regulatory -0.0282509
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0276834
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0274794
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0274246
HMGB1 high mobility group box 1 -0.0272638
RPS23 ribosomal protein S23 -0.027111
RACK1 receptor for activated C kinase 1 -0.0270102
RPS15 ribosomal protein S15 -0.0267716
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0264796
ZNF292 zinc finger protein 292 -0.0264603
RPL11 ribosomal protein L11 -0.0264415
TRA2A transformer 2 alpha homolog (Drosophila) -0.0257147
RPL23A ribosomal protein L23a -0.025643
ZFAND3 zinc finger, AN1-type domain 3 -0.0251857
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0241526
NNMT nicotinamide N-methyltransferase -0.0241071
ASPH aspartate beta-hydroxylase -0.0240368
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0240246
NRG1 neuregulin 1 -0.0238393
SEPTIN7 septin 7 -0.0235393
RPLP2 ribosomal protein, large, P2 -0.0231764
SRGN serglycin -0.0230946
S100A10 S100 calcium binding protein A10 -0.0230868
EFNA5 ephrin-A5 -0.0229748
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0229366
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0226288
RAN RAN, member RAS oncogene family -0.0226009
ADGRG6 adhesion G protein-coupled receptor G6 -0.0223832
TMEM123 transmembrane protein 123 -0.0223288
TUBA1B tubulin, alpha 1b -0.0222418
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0219076
QKI QKI, KH domain containing, RNA binding -0.0216813
SLC38A2 solute carrier family 38, member 2 -0.0216048
RPL19 ribosomal protein L19 -0.0215598
CAVIN1 caveolae associated protein 1 -0.021387
RPL31 ribosomal protein L31 -0.0213548
NCOA7 nuclear receptor coactivator 7 -0.0210081
DENND4A DENN/MADD domain containing 4A -0.0209964
RPL5 ribosomal protein L5 -0.0208383
RPL32 ribosomal protein L32 -0.0205436
BIRC2 baculoviral IAP repeat containing 2 -0.0205097
NEGR1 neuronal growth regulator 1 -0.0204007
ENO1 enolase 1, (alpha) -0.0202677
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0202287
CENPF centromere protein F, 350/400kDa -0.0201304
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0200904