Delamanid_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Delamanid perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Delamanid_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAM13A family with sequence similarity 13, member A 0.139107
ELL2 elongation factor, RNA polymerase II, 2 0.136967
PDE4D phosphodiesterase 4D, cAMP-specific 0.131499
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.105302
TRIO trio Rho guanine nucleotide exchange factor 0.0972484
PDE10A phosphodiesterase 10A 0.0959396
HOOK2 hook microtubule-tethering protein 2 0.0948068
CA8 carbonic anhydrase VIII 0.087736
KRT17 keratin 17, type I 0.0829255
SPAG9 sperm associated antigen 9 0.0805009
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.079813
RNF145 ring finger protein 145 0.0781822
FTH1 ferritin, heavy polypeptide 1 0.0752059
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0747596
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0743966
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0729118
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0711409
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0701827
OGA O-GlcNAcase 0.0684409
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0667067
SRRM2 serine/arginine repetitive matrix 2 0.0657042
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0605037
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0593054
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0592862
NGLY1 N-glycanase 1 0.0585245
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0582291
MCL1 myeloid cell leukemia 1 0.0572848
FNDC3B fibronectin type III domain containing 3B 0.0572797
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0563505
ANLN anillin, actin binding protein 0.0557255
CA12 carbonic anhydrase XII 0.0549708
IARS1 isoleucyl-tRNA synthetase 1 0.0542683
FNIP1 folliculin interacting protein 1 0.0539294
COLEC11 collectin sub-family member 11 0.0514703
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0514473
CENPF centromere protein F, 350/400kDa 0.0510218
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0494955
KIF13B kinesin family member 13B 0.0477198
AFF1 AF4/FMR2 family, member 1 0.0466383
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0462596
TPD52 tumor protein D52 0.0461825
CXCL8 chemokine (C-X-C motif) ligand 8 0.046143
YTHDC1 YTH domain containing 1 0.0456236
PHF3 PHD finger protein 3 0.0454025
UBE2O ubiquitin-conjugating enzyme E2O 0.0452264
KYNU kynureninase 0.0448463
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0447029
DST dystonin 0.0444378
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0443987
APP amyloid beta (A4) precursor protein 0.0440125
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0439013
KMT2E lysine (K)-specific methyltransferase 2E 0.0439001
PTK2 protein tyrosine kinase 2 0.0435619
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0435062
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0431721
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.043149
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0428277
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 0.0425778
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0417809
PLAUR plasminogen activator, urokinase receptor 0.0416456
BASP1 brain abundant, membrane attached signal protein 1 0.0415192
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0412859
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0410501
ADNP activity-dependent neuroprotector homeobox 0.0408533
ZNF207 zinc finger protein 207 0.0402454
MAST4 microtubule associated serine/threonine kinase family member 4 0.0398195
DTNA dystrobrevin, alpha 0.0395106
SLMAP sarcolemma associated protein 0.0392065
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.039004
JUN jun proto-oncogene 0.0387248
DLC1 DLC1 Rho GTPase activating protein 0.0387019
NALF1 NALCN channel auxiliary factor 1 0.0386576
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0385648
BHLHE40 basic helix-loop-helix family, member e40 0.0383168
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0375769
ADAM17 ADAM metallopeptidase domain 17 0.0374596
RHEB Ras homolog enriched in brain 0.0373227
CUL3 cullin 3 0.0367164
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0355531
PTEN phosphatase and tensin homolog 0.035422
ANKRD28 ankyrin repeat domain 28 0.0350204
USP3 ubiquitin specific peptidase 3 0.0343489
RAB1A RAB1A, member RAS oncogene family 0.0339521
TM4SF1 transmembrane 4 L six family member 1 0.0338907
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0335118
PICALM phosphatidylinositol binding clathrin assembly protein 0.0327775
EGLN1 egl-9 family hypoxia-inducible factor 1 0.032658
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0326463
MKI67 marker of proliferation Ki-67 0.0324587
CHD1 chromodomain helicase DNA binding protein 1 0.0311987
RB1CC1 RB1-inducible coiled-coil 1 0.0310008
RAD21 RAD21 homolog (S. pombe) 0.030994
RND3 Rho family GTPase 3 0.030859
SNX14 sorting nexin 14 0.0306381
ACVR1 activin A receptor, type I 0.0305045
SEC63 SEC63 homolog (S. cerevisiae) 0.0304173
CSNK1E casein kinase 1, epsilon 0.0303158
TTC3 tetratricopeptide repeat domain 3 0.0302283
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0300751
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0300586

decreased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.135892
NPEPPS aminopeptidase puromycin sensitive -0.122994
GRB10 growth factor receptor-bound protein 10 -0.120653
LMO7 LIM domain 7 -0.113452
LAMB3 laminin, beta 3 -0.112701
ATOSA atos homolog A -0.11237
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.109663
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.104041
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0948128
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0826265
PARD3 par-3 family cell polarity regulator -0.0788797
AHNAK AHNAK nucleoprotein -0.0744913
ABHD17C abhydrolase domain containing 17C -0.0737626
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0732203
CEMIP cell migration inducing protein, hyaluronan binding -0.072441
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0723991
LAMC2 laminin, gamma 2 -0.0693286
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0682692
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0677806
ITCH itchy E3 ubiquitin protein ligase -0.0670746
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0663674
UBE2H ubiquitin-conjugating enzyme E2H -0.0655739
DOCK4 dedicator of cytokinesis 4 -0.065123
PRELID2 PRELI domain containing 2 -0.0628139
MYOF myoferlin -0.0623485
NEBL nebulette -0.061828
SAMD4A sterile alpha motif domain containing 4A -0.0616637
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0601481
GOLGB1 golgin B1 -0.0599536
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0598298
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0597017
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0577288
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0576702
NBEA neurobeachin -0.0575335
SVIL supervillin -0.0557041
HOOK3 hook microtubule-tethering protein 3 -0.0554386
WARS1 tryptophanyl-tRNA synthetase 1 -0.0548848
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0547407
TXNRD1 thioredoxin reductase 1 -0.0543448
BACE2 beta-site APP-cleaving enzyme 2 -0.0535451
MAPK6 mitogen-activated protein kinase 6 -0.0532371
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0530776
HLA-B major histocompatibility complex, class I, B -0.0528906
KIAA1217 KIAA1217 -0.0517918
TMEM41B transmembrane protein 41B -0.051403
BTG1 B-cell translocation gene 1, anti-proliferative -0.0505396
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0496433
XRN1 5'-3' exoribonuclease 1 -0.0483957
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0476651
PERP PERP, TP53 apoptosis effector -0.0472889
KDM7A lysine (K)-specific demethylase 7A -0.0471823
FMN1 formin 1 -0.047014
SAMD9 sterile alpha motif domain containing 9 -0.0469975
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.046767
ZMYM2 zinc finger, MYM-type 2 -0.0462384
MYO5A myosin VA (heavy chain 12, myoxin) -0.0462354
KIAA1671 KIAA1671 -0.0457616
AKAP9 A kinase (PRKA) anchor protein 9 -0.0448739
ADAM10 ADAM metallopeptidase domain 10 -0.0445233
RCOR1 REST corepressor 1 -0.0444806
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0441051
DSCAM Down syndrome cell adhesion molecule -0.0433266
TANK TRAF family member-associated NFKB activator -0.0432243
DOCK9 dedicator of cytokinesis 9 -0.0431524
AKAP13 A kinase (PRKA) anchor protein 13 -0.0422062
CSDE1 cold shock domain containing E1, RNA-binding -0.0420604
SMYD3 SET and MYND domain containing 3 -0.0418931
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0417685
ZNF638 zinc finger protein 638 -0.0416538
RUFY1 RUN and FYVE domain containing 1 -0.0413627
CDC42 cell division cycle 42 -0.0411991
IFI16 interferon, gamma-inducible protein 16 -0.040865
PATJ PATJ crumbs cell polarity complex component -0.0405911
SAR1A secretion associated, Ras related GTPase 1A -0.0405236
MAML2 mastermind-like 2 (Drosophila) -0.0402812
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0402304
PDIA4 protein disulfide isomerase family A, member 4 -0.0401211
DSG2 desmoglein 2 -0.0399163
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0392063
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0381871
PHF21A PHD finger protein 21A -0.0381855
MACC1 metastasis associated in colon cancer 1 -0.0380953
RIGI RNA sensor RIG-I -0.0379785
FOXO1 forkhead box O1 -0.0377276
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0374962
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0374898
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0372643
CDK12 cyclin-dependent kinase 12 -0.0371946
RBM47 RNA binding motif protein 47 -0.0363803
ARHGAP26 Rho GTPase activating protein 26 -0.0359474
SDC4 syndecan 4 -0.0358467
RREB1 ras responsive element binding protein 1 -0.0357774
AUTS2 autism susceptibility candidate 2 -0.0357652
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.035605
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0355761
MUC16 mucin 16, cell surface associated -0.0343451
RNF213 ring finger protein 213 -0.0342541
PDIA3 protein disulfide isomerase family A, member 3 -0.0340165
MBD5 methyl-CpG binding domain protein 5 -0.0338923
B2M beta-2-microglobulin -0.0338772