Delamanid_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Delamanid perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Delamanid_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.212074
THBS1 thrombospondin 1 0.161025
CALR calreticulin 0.143973
COL11A1 collagen, type XI, alpha 1 0.125705
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.122662
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.118028
PTMA prothymosin, alpha 0.0904321
EEF2 eukaryotic translation elongation factor 2 0.0893294
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0849724
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0808644
SRRM2 serine/arginine repetitive matrix 2 0.0640566
ACTG1 actin gamma 1 0.0626867
MYH9 myosin, heavy chain 9, non-muscle 0.0595944
APP amyloid beta (A4) precursor protein 0.0554769
COL3A1 collagen, type III, alpha 1 0.0528025
COL5A2 collagen, type V, alpha 2 0.0519793
PRPF8 pre-mRNA processing factor 8 0.0515912
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0513075
FLNA filamin A, alpha 0.0503841
ZEB2 zinc finger E-box binding homeobox 2 0.0500818
GSE1 Gse1 coiled-coil protein 0.0470985
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0463656
NTM neurotrimin 0.0451715
CCN2 cellular communication network factor 2 0.0447167
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0443491
RFPL4B ret finger protein-like 4B 0.0442855
SPAG9 sperm associated antigen 9 0.0442649
PCLO piccolo presynaptic cytomatrix protein 0.0434396
ANXA2 annexin A2 0.0431774
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.0429887
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0421298
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0418193
TPM3 tropomyosin 3 0.0412564
MACF1 microtubule-actin crosslinking factor 1 0.0409551
NFE2L1 nuclear factor, erythroid 2-like 1 0.0403578
UPP1 uridine phosphorylase 1 0.0400868
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0383595
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0375764
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.0374828
PCDH9 protocadherin 9 0.0366697
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0363151
B2M beta-2-microglobulin 0.0361753
SLC38A2 solute carrier family 38, member 2 0.0346571
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0344418
SAMD4A sterile alpha motif domain containing 4A 0.0343954
HSPA8 heat shock 70kDa protein 8 0.0334663
SFTPA2 surfactant protein A2 0.0333706
FTH1 ferritin, heavy polypeptide 1 0.0333576
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0330104
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.0325673
RPL3 ribosomal protein L3 0.0322092
PRELID2 PRELI domain containing 2 0.0319819
PAK4 p21 protein (Cdc42/Rac)-activated kinase 4 0.0317434
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0316625
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0312396
TTC28 tetratricopeptide repeat domain 28 0.03054
TMED9 transmembrane emp24 protein transport domain containing 9 0.0304407
RPN1 ribophorin I 0.0301883
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0300859
EIF4H eukaryotic translation initiation factor 4H 0.0298167
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0294413
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0290101
DOCK5 dedicator of cytokinesis 5 0.0287805
FN1 fibronectin 1 0.0287462
SSR1 signal sequence receptor, alpha 0.0286819
MB21D2 Mab-21 domain containing 2 0.0286045
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0284227
COTL1 coactosin-like F-actin binding protein 1 0.0283703
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0283566
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0280887
EIF4B eukaryotic translation initiation factor 4B 0.0278649
MCL1 myeloid cell leukemia 1 0.0277313
TENM2 teneurin transmembrane protein 2 0.0277053
IGF1R insulin-like growth factor 1 receptor 0.0276591
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0275749
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.0275039
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0274979
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0273013
STMN1 stathmin 1 0.0270497
ADGRV1 adhesion G protein-coupled receptor V1 0.0266407
DNMBP dynamin binding protein 0.0263648
SPAG5 sperm associated antigen 5 0.0261075
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0261002
AHNAK AHNAK nucleoprotein 0.0259569
PCDH7 protocadherin 7 0.0258645
KIF5B kinesin family member 5B 0.02579
RPL7A ribosomal protein L7a 0.0256855
RPL4 ribosomal protein L4 0.0254839
ANXA1 annexin A1 0.0253565
ZC3H13 zinc finger CCCH-type containing 13 0.0252507
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0250736
SGCE sarcoglycan, epsilon 0.0250681
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.024924
TPM4 tropomyosin 4 0.0248269
CNN3 calponin 3, acidic 0.0246581
CCNL1 cyclin L1 0.0246141
RAD21 RAD21 homolog (S. pombe) 0.0242879
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0242848
MAP7D1 MAP7 domain containing 1 0.0242188
IVNS1ABP influenza virus NS1A binding protein 0.0241745

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0916035
TSC22D2 TSC22 domain family, member 2 -0.0905303
PFN1 profilin 1 -0.0850166
PHIP pleckstrin homology domain interacting protein -0.0808449
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0707348
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0706541
RPLP1 ribosomal protein, large, P1 -0.0696615
STRN3 striatin, calmodulin binding protein 3 -0.0641724
MED13L mediator complex subunit 13-like -0.0638442
RPS6 ribosomal protein S6 -0.0615241
PGAP1 post-GPI attachment to proteins 1 -0.0614471
RPLP0 ribosomal protein, large, P0 -0.0597571
SRP54 signal recognition particle 54kDa -0.0590256
ZFAND3 zinc finger, AN1-type domain 3 -0.0571704
PUM1 pumilio RNA-binding family member 1 -0.0568766
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0534887
CKAP2 cytoskeleton associated protein 2 -0.0528577
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0514356
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0512127
FBXO11 F-box protein 11 -0.0511787
RYBP RING1 and YY1 binding protein -0.0510888
ATP5F1B ATP synthase F1 subunit beta -0.0507095
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0484415
CENPF centromere protein F, 350/400kDa -0.0466119
TUBA1B tubulin, alpha 1b -0.0459495
ZNF292 zinc finger protein 292 -0.0452185
DENND4C DENN/MADD domain containing 4C -0.0446524
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0442843
MTF2 metal response element binding transcription factor 2 -0.043321
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0432157
KDM5B lysine (K)-specific demethylase 5B -0.0423461
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0423286
PEG10 paternally expressed 10 -0.0417687
NOP58 NOP58 ribonucleoprotein -0.0415996
NIPBL Nipped-B homolog (Drosophila) -0.0414892
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0414314
HMGB1 high mobility group box 1 -0.0414232
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0413442
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.041186
RPS8 ribosomal protein S8 -0.0409411
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0407974
NAP1L1 nucleosome assembly protein 1-like 1 -0.0407161
PDIA3 protein disulfide isomerase family A, member 3 -0.0407029
GOLGA4 golgin A4 -0.0406675
PRTG protogenin -0.0404876
ZFPM2 zinc finger protein, FOG family member 2 -0.0399693
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0399593
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0393916
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0383614
NFIA nuclear factor I/A -0.0382725
RPS2 ribosomal protein S2 -0.0381952
XPO1 exportin 1 -0.037981
PRKD1 protein kinase D1 -0.0375321
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0375024
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0374364
RBM39 RNA binding motif protein 39 -0.0370067
CCDC88A coiled-coil domain containing 88A -0.0367785
GPBP1 GC-rich promoter binding protein 1 -0.0364156
JMJD1C jumonji domain containing 1C -0.0359241
STAG2 stromal antigen 2 -0.0355765
SEPTIN7 septin 7 -0.0350755
NBEAL1 neurobeachin-like 1 -0.0349647
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0348019
POTEF POTE ankyrin domain family, member F -0.0346201
ARHGAP15 Rho GTPase activating protein 15 -0.0342403
PARD3B par-3 family cell polarity regulator beta -0.0341625
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0334724
RTN3 reticulon 3 -0.0328891
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0327913
RPL23 ribosomal protein L23 -0.0324831
TOR1AIP2 torsin A interacting protein 2 -0.0324248
BRWD1 bromodomain and WD repeat domain containing 1 -0.0321863
RPL34 ribosomal protein L34 -0.0319582
ZC3H15 zinc finger CCCH-type containing 15 -0.0319476
RDX radixin -0.0315536
LMAN1 lectin, mannose-binding, 1 -0.0315381
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.031393
HMGB2 high mobility group box 2 -0.0310228
VDAC1 voltage-dependent anion channel 1 -0.0309182
MEIS2 Meis homeobox 2 -0.0308653
VCL vinculin -0.0307997
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0307728
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.030757
RPS20 ribosomal protein S20 -0.0302588
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0299089
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) -0.0298838
UBB ubiquitin B -0.0296599
ASTN2 astrotactin 2 -0.0294365
ERBIN erbb2 interacting protein -0.0292762
RPS14 ribosomal protein S14 -0.0290585
FOXP2 forkhead box P2 -0.0290302
PGK1 phosphoglycerate kinase 1 -0.0288585
UBE2K ubiquitin-conjugating enzyme E2K -0.0283676
SHROOM3 shroom family member 3 -0.0283361
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0282574
LDHA lactate dehydrogenase A -0.0279895
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0279866
NUP155 nucleoporin 155kDa -0.0279495
SNX6 sorting nexin 6 -0.027903
OSBPL8 oxysterol binding protein-like 8 -0.0278951