Dexamethasone_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 0.130983
TXNIP thioredoxin interacting protein 0.101052
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0926238
PTBP3 polypyrimidine tract binding protein 3 0.0894313
B2M beta-2-microglobulin 0.0830913
MACC1 metastasis associated in colon cancer 1 0.0787432
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0784432
SPTBN1 spectrin, beta, non-erythrocytic 1 0.073736
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0718997
TMC5 transmembrane channel-like 5 0.0620239
TOP2A topoisomerase (DNA) II alpha 170kDa 0.060799
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0601057
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0560257
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0545769
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0528269
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0500425
RNF149 ring finger protein 149 0.0475848
STK24 serine/threonine kinase 24 0.0471222
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0458842
IL20RA interleukin 20 receptor, alpha 0.044825
MEIS2 Meis homeobox 2 0.0426698
DSTN destrin (actin depolymerizing factor) 0.0422547
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 0.0421029
BPTF bromodomain PHD finger transcription factor 0.0415548
PATJ PATJ crumbs cell polarity complex component 0.0409467
LOC102724023 ES1 protein homolog, mitochondrial 0.0406206
MYO1E myosin IE 0.0398334
TMEM51 transmembrane protein 51 0.0397346
PDIA3 protein disulfide isomerase family A, member 3 0.0394821
RAB6A RAB6A, member RAS oncogene family 0.0389622
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0388463
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0386975
ARHGAP5 Rho GTPase activating protein 5 0.0386076
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0384614
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0383148
SMC4 structural maintenance of chromosomes 4 0.0376831
ENO1 enolase 1, (alpha) 0.0375653
DSPP dentin sialophosphoprotein 0.0372733
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0368739
ERBIN erbb2 interacting protein 0.0359118
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0356079
KLF3 Kruppel-like factor 3 (basic) 0.0354831
OCLN occludin 0.0354559
ARGLU1 arginine and glutamate rich 1 0.0352573
ABHD2 abhydrolase domain containing 2 0.0349371
MKI67 marker of proliferation Ki-67 0.0339383
PTEN phosphatase and tensin homolog 0.033781
TMEM62 transmembrane protein 62 0.0336949
RHOBTB3 Rho-related BTB domain containing 3 0.0336186
EHF ets homologous factor 0.0332077
DSCAM Down syndrome cell adhesion molecule 0.033116
EPS8 epidermal growth factor receptor pathway substrate 8 0.0327445
EPCAM epithelial cell adhesion molecule 0.0327231
NMU neuromedin U 0.0327167
MPHOSPH8 M-phase phosphoprotein 8 0.0324352
KMT2E lysine (K)-specific methyltransferase 2E 0.0323665
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0322449
PTMA prothymosin, alpha 0.0315771
NCOR1 nuclear receptor corepressor 1 0.0314923
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0312981
TPM4 tropomyosin 4 0.0301914
ITGA6 integrin, alpha 6 0.030077
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0291754
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0291013
PHACTR4 phosphatase and actin regulator 4 0.0287816
IFNGR1 interferon gamma receptor 1 0.0287698
PRELID2 PRELI domain containing 2 0.028573
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0285192
GOLGA2 golgin A2 0.0284855
IFI27 interferon, alpha-inducible protein 27 0.0284098
OGA O-GlcNAcase 0.0284022
KLF5 Kruppel-like factor 5 (intestinal) 0.028226
GCC2 GRIP and coiled-coil domain containing 2 0.02795
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0279329
TAOK3 TAO kinase 3 0.0278455
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0275657
ERRFI1 ERBB receptor feedback inhibitor 1 0.0275473
KTN1 kinectin 1 (kinesin receptor) 0.0275242
GBP2 guanylate binding protein 2, interferon-inducible 0.0275005
FHL2 four and a half LIM domains 2 0.0271002
NPEPPS aminopeptidase puromycin sensitive 0.0269277
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0268578
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0267102
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.026431
CSNK1A1 casein kinase 1, alpha 1 0.0263184
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0263075
UBE2H ubiquitin-conjugating enzyme E2H 0.0262961
KLF6 Kruppel-like factor 6 0.0260339
SCAF11 SR-related CTD-associated factor 11 0.0249975
SBF2 SET binding factor 2 0.0248675
KRT19 keratin 19, type I 0.0248409
RUNX1 runt-related transcription factor 1 0.024725
GGNBP2 gametogenetin binding protein 2 0.024684
ZNF395 zinc finger protein 395 0.0246423
ESRP1 epithelial splicing regulatory protein 1 0.0246249
UGCG UDP-glucose ceramide glucosyltransferase 0.02462
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0243865
KPNB1 karyopherin (importin) beta 1 0.0243799
DNM2 dynamin 2 0.0242917
RPS6 ribosomal protein S6 0.0240458

decreased expression

Symbol Name Standardized Value
INTS6 integrator complex subunit 6 -0.167393
GMDS GDP-mannose 4,6-dehydratase -0.115432
RNF213 ring finger protein 213 -0.103866
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0990689
ANXA2 annexin A2 -0.0949196
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0932006
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0891036
RIGI RNA sensor RIG-I -0.0887968
PLSCR2 phospholipid scramblase 2 -0.0873191
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0865475
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0859689
SQSTM1 sequestosome 1 -0.0812053
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0799832
EGR1 early growth response 1 -0.0752138
SP100 SP100 nuclear antigen -0.0738336
LMO7 LIM domain 7 -0.072214
MX1 MX dynamin-like GTPase 1 -0.0646648
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0619797
RAB7A RAB7A, member RAS oncogene family -0.0617993
LAMA4 laminin, alpha 4 -0.0589022
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0575312
TM4SF19 transmembrane 4 L six family member 19 -0.0568796
SMAD3 SMAD family member 3 -0.056092
PLSCR1 phospholipid scramblase 1 -0.0548529
FTH1 ferritin, heavy polypeptide 1 -0.0528687
SHB Src homology 2 domain containing adaptor protein B -0.0506231
GCLC glutamate-cysteine ligase, catalytic subunit -0.0489566
MX2 MX dynamin-like GTPase 2 -0.0470456
ANKRD10 ankyrin repeat domain 10 -0.0461838
UBAP2 ubiquitin associated protein 2 -0.0439878
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0434808
NABP1 nucleic acid binding protein 1 -0.0425965
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0424511
PKM pyruvate kinase, muscle -0.0416065
HKDC1 hexokinase domain containing 1 -0.0415989
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0410809
ASPH aspartate beta-hydroxylase -0.0395517
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0394102
VCL vinculin -0.0377092
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.037619
MAP7 microtubule-associated protein 7 -0.0373451
EPHB2 EPH receptor B2 -0.0370398
ALCAM activated leukocyte cell adhesion molecule -0.0368759
MCL1 myeloid cell leukemia 1 -0.0364874
MCTP1 multiple C2 domains, transmembrane 1 -0.0364728
SDC4 syndecan 4 -0.0364443
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0361933
FBXO39 F-box protein 39 -0.0358874
ARHGAP26 Rho GTPase activating protein 26 -0.0354593
MSI2 musashi RNA-binding protein 2 -0.0352261
POU2F2 POU class 2 homeobox 2 -0.0350791
VMP1 vacuole membrane protein 1 -0.0348722
HOMER1 homer scaffolding protein 1 -0.0345749
BTBD9 BTB (POZ) domain containing 9 -0.0345195
CATSPERB catsper channel auxiliary subunit beta -0.0335579
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0333446
EPSTI1 epithelial stromal interaction 1 (breast) -0.0330472
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0330377
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0330273
PHF3 PHD finger protein 3 -0.0316744
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.031175
EXT1 exostosin glycosyltransferase 1 -0.0311497
MUC20 mucin 20, cell surface associated -0.0307632
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0306399
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0305581
STS steroid sulfatase (microsomal), isozyme S -0.0299418
SAMD9 sterile alpha motif domain containing 9 -0.0294219
TRIO trio Rho guanine nucleotide exchange factor -0.0290635
DSCAML1 Down syndrome cell adhesion molecule like 1 -0.0284365
APP amyloid beta (A4) precursor protein -0.0283355
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0280056
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0275401
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0270088
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0267347
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0266758
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0265557
EEIG1 estrogen-induced osteoclastogenesis regulator 1 -0.0263824
TSHZ2 teashirt zinc finger homeobox 2 -0.0263734
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0262174
PRKCA protein kinase C, alpha -0.0254577
SDCBP syndecan binding protein (syntenin) -0.0252331
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.025086
AKAP13 A kinase (PRKA) anchor protein 13 -0.0249585
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0246834
RCOR1 REST corepressor 1 -0.0246189
TNS4 tensin 4 -0.0240958
ZNF292 zinc finger protein 292 -0.0240761
FNIP1 folliculin interacting protein 1 -0.0240481
LARP4B La ribonucleoprotein domain family, member 4B -0.0240272
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0237887
SIL1 SIL1 nucleotide exchange factor -0.0236839
HLA-C major histocompatibility complex, class I, C -0.0235055
ANKRD11 ankyrin repeat domain 11 -0.0234451
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa -0.0230803
DDIT3 DNA-damage-inducible transcript 3 -0.0229803
POF1B premature ovarian failure, 1B -0.022976
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0228127
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0227327
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0227077
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0223158