Dexamethasone_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.396854
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.274798
APOB apolipoprotein B 0.266317
ERRFI1 ERBB receptor feedback inhibitor 1 0.174381
MT2A metallothionein 2A 0.124375
GPC3 glypican 3 0.0958527
ENO1 enolase 1, (alpha) 0.0838543
C3 complement component 3 0.0831746
DSPP dentin sialophosphoprotein 0.0812863
FN1 fibronectin 1 0.0775898
ACSL4 acyl-CoA synthetase long-chain family member 4 0.0712717
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.070627
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0549334
FBF1 Fas (TNFRSF6) binding factor 1 0.0518912
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.05091
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0507378
CCL20 chemokine (C-C motif) ligand 20 0.0504088
RPS6 ribosomal protein S6 0.0469935
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0467761
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0448206
TRIM26 tripartite motif containing 26 0.0446552
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0435705
TF transferrin 0.0435216
FGG fibrinogen gamma chain 0.0432395
ELL2 elongation factor, RNA polymerase II, 2 0.0430303
TIMP1 TIMP metallopeptidase inhibitor 1 0.0404954
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0399079
PABPC1 poly(A) binding protein, cytoplasmic 1 0.039892
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0393352
SOS1 son of sevenless homolog 1 (Drosophila) 0.0390884
ZMYND8 zinc finger, MYND-type containing 8 0.0386578
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0382737
APOE apolipoprotein E 0.0381122
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0378743
DDIT4 DNA-damage-inducible transcript 4 0.0348685
RBM39 RNA binding motif protein 39 0.0345947
AFDN afadin, adherens junction formation factor 0.0336791
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0327619
PRRC2C proline-rich coiled-coil 2C 0.0317065
A2M alpha-2-macroglobulin 0.0315196
CPE carboxypeptidase E 0.0303441
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0293533
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0291179
MBNL3 muscleblind-like splicing regulator 3 0.0289677
RPL11 ribosomal protein L11 0.0282699
UBE2D2 ubiquitin-conjugating enzyme E2D 2 0.0280179
KIF5B kinesin family member 5B 0.0278629
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0274055
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 0.0269444
FGA fibrinogen alpha chain 0.0259221
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0256555
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0256095
RPS12 ribosomal protein S12 0.0255971
FTL ferritin, light polypeptide 0.0254432
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0253191
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0248631
OGA O-GlcNAcase 0.0248615
TPT1 tumor protein, translationally-controlled 1 0.0245329
IFNGR1 interferon gamma receptor 1 0.024225
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.0240574
CFB complement factor B 0.0239281
ECE1 endothelin converting enzyme 1 0.0238761
MATN3 matrilin 3 0.0233613
EEF2 eukaryotic translation elongation factor 2 0.0231732
EPAS1 endothelial PAS domain protein 1 0.0230504
KIF1B kinesin family member 1B 0.0228755
MATR3 matrin 3 0.022736
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0226657
APOA2 apolipoprotein A-II 0.0220167
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0219573
NIPBL Nipped-B homolog (Drosophila) 0.0218465
RPLP0 ribosomal protein, large, P0 0.0217978
PGK1 phosphoglycerate kinase 1 0.0216935
PTBP3 polypyrimidine tract binding protein 3 0.0216889
APOA1 apolipoprotein A-I 0.0216537
CTSB cathepsin B 0.0215584
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0214554
FKBP5 FK506 binding protein 5 0.0213552
PTPRM protein tyrosine phosphatase, receptor type, M 0.0213229
PCM1 pericentriolar material 1 0.020712
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0207043
WDR45B WD repeat domain 45B 0.0206796
PHIP pleckstrin homology domain interacting protein 0.0204332
GOLGA4 golgin A4 0.0203312
FOXN3 forkhead box N3 0.0203138
SELENOP selenoprotein P 0.0202894
LRMDA leucine rich melanocyte differentiation associated 0.0201973
RACK1 receptor for activated C kinase 1 0.0200428
RAB1A RAB1A, member RAS oncogene family 0.0198835
CDK19 cyclin-dependent kinase 19 0.019876
RTN4 reticulon 4 0.01987
KTN1 kinectin 1 (kinesin receptor) 0.0198398
SRRM1 serine/arginine repetitive matrix 1 0.0197458
MED13L mediator complex subunit 13-like 0.01961
RRBP1 ribosome binding protein 1 0.0196063
ZNF292 zinc finger protein 292 0.0195226
RBM25 RNA binding motif protein 25 0.0194581
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0193955
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0193343
RB1CC1 RB1-inducible coiled-coil 1 0.019218

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.444506
AKAP12 A kinase (PRKA) anchor protein 12 -0.0964546
SAMD4A sterile alpha motif domain containing 4A -0.0721083
MAML2 mastermind-like 2 (Drosophila) -0.0661823
EHBP1 EH domain binding protein 1 -0.066105
ASPH aspartate beta-hydroxylase -0.0625854
GMDS GDP-mannose 4,6-dehydratase -0.0610829
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0588316
ATXN1 ataxin 1 -0.0548699
FRMD5 FERM domain containing 5 -0.0472664
INTS6 integrator complex subunit 6 -0.0447893
NPAS2 neuronal PAS domain protein 2 -0.0409871
PDLIM5 PDZ and LIM domain 5 -0.0404472
EXT1 exostosin glycosyltransferase 1 -0.0388359
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0373974
HMGA1 high mobility group AT-hook 1 -0.0370515
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0366216
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.03187
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0294284
DTNA dystrobrevin, alpha -0.0292965
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0290634
FAT1 FAT atypical cadherin 1 -0.028801
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0284303
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0283966
EGR1 early growth response 1 -0.0283938
DST dystonin -0.0275744
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0272573
RNF213 ring finger protein 213 -0.0263068
GRB10 growth factor receptor-bound protein 10 -0.0262738
NDRG1 N-myc downstream regulated 1 -0.0261237
NHSL1 NHS-like 1 -0.0257687
NKD1 naked cuticle homolog 1 (Drosophila) -0.0256918
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0244796
GK glycerol kinase -0.0241906
MCL1 myeloid cell leukemia 1 -0.0238596
PARD3 par-3 family cell polarity regulator -0.023272
PRKCA protein kinase C, alpha -0.0232703
RIGI RNA sensor RIG-I -0.0228967
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0226601
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0226495
TMSB10 thymosin beta 10 -0.0224217
ATP10A ATPase, class V, type 10A -0.0223286
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 -0.0221519
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0221355
FOXP1 forkhead box P1 -0.022046
OSBPL10 oxysterol binding protein-like 10 -0.0219775
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0218973
ARHGAP26 Rho GTPase activating protein 26 -0.0214918
GPC6 glypican 6 -0.0212148
ZHX2 zinc fingers and homeoboxes 2 -0.0212
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0210318
SP100 SP100 nuclear antigen -0.0208578
JAG1 jagged 1 -0.0199259
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0194125
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0192589
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0189812
ENKUR enkurin, TRPC channel interacting protein -0.0185859
MSI2 musashi RNA-binding protein 2 -0.0184563
VEGFA vascular endothelial growth factor A -0.0183549
AGO2 argonaute RISC catalytic component 2 -0.0182875
FAM107B family with sequence similarity 107, member B -0.0178047
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0176767
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0173105
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0173033
DLC1 DLC1 Rho GTPase activating protein -0.0170921
ITGAV integrin, alpha V -0.0169286
MYO1E myosin IE -0.0165925
ZBTB20 zinc finger and BTB domain containing 20 -0.0164136
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0163691
CMIP c-Maf inducing protein -0.01619
IGFBP3 insulin-like growth factor binding protein 3 -0.0161813
IGF1R insulin-like growth factor 1 receptor -0.0160401
TNS3 tensin 3 -0.0159306
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0155365
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 -0.0152852
TIMP2 TIMP metallopeptidase inhibitor 2 -0.015232
FILIP1L filamin A interacting protein 1-like -0.0151789
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0147379
CNKSR3 CNKSR family member 3 -0.0147348
RASA2 RAS p21 protein activator 2 -0.0147049
RUNX1 runt-related transcription factor 1 -0.0146813
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0144999
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0144666
MX2 MX dynamin-like GTPase 2 -0.0143959
HOMER1 homer scaffolding protein 1 -0.01437
GLIS3 GLIS family zinc finger 3 -0.0140772
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0140691
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0139957
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0139783
FNDC3B fibronectin type III domain containing 3B -0.0138333
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 -0.0137733
STK17A serine/threonine kinase 17a -0.0136114
TRIM25 tripartite motif containing 25 -0.013599
RASAL2 RAS protein activator like 2 -0.0135879
SMAD3 SMAD family member 3 -0.0135701
HPCAL1 hippocalcin-like 1 -0.0133754
TNS1 tensin 1 -0.0133534
FMNL2 formin-like 2 -0.0131145
VCAN versican -0.013106
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0131042