Dexamethasone_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0609154
EEF2 eukaryotic translation elongation factor 2 0.0543428
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0513314
MT1X metallothionein 1X 0.0455736
FKBP5 FK506 binding protein 5 0.0421972
ESYT2 extended synaptotagmin-like protein 2 0.0361121
ZFP36L1 ZFP36 ring finger protein-like 1 0.0346374
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0321444
ERRFI1 ERBB receptor feedback inhibitor 1 0.0308517
SRGN serglycin 0.0276748
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0269437
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 0.0242619
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0240814
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0238502
ANKRD12 ankyrin repeat domain 12 0.0235953
MKI67 marker of proliferation Ki-67 0.0217479
MT1E metallothionein 1E 0.021619
SET SET nuclear proto-oncogene 0.0205552
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0203206
CAPRIN2 caprin family member 2 0.0203003
EIF4A2 eukaryotic translation initiation factor 4A2 0.0198034
YEATS2 YEATS domain containing 2 0.0196026
PIAS2 protein inhibitor of activated STAT, 2 0.0193874
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0192404
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0191523
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0186932
ANXA1 annexin A1 0.0182481
ZMYND8 zinc finger, MYND-type containing 8 0.018134
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0159282
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0158589
DGKH diacylglycerol kinase, eta 0.0157399
N4BP2L2 NEDD4 binding protein 2-like 2 0.0157235
IPO7 importin 7 0.0154277
SLC38A2 solute carrier family 38, member 2 0.015377
RPS6 ribosomal protein S6 0.0152641
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0151769
MTCL1 microtubule crosslinking factor 1 0.0149249
SLK STE20-like kinase 0.0149206
PKN2 protein kinase N2 0.01488
USP9X ubiquitin specific peptidase 9, X-linked 0.014227
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0141769
IL6ST interleukin 6 signal transducer 0.0141542
RPS23 ribosomal protein S23 0.0140813
GIGYF2 GRB10 interacting GYF protein 2 0.0138129
KLF9 Kruppel-like factor 9 0.0137357
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0135459
ANKRD36 ankyrin repeat domain 36 0.0135437
ZBTB20 zinc finger and BTB domain containing 20 0.0134734
HMGA1 high mobility group AT-hook 1 0.0134534
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0133341
KLHL24 kelch-like family member 24 0.0133217
HJURP Holliday junction recognition protein 0.0130381
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.0130087
KIAA1958 KIAA1958 0.0127419
SMAP1 small ArfGAP 1 0.0126183
SBF2 SET binding factor 2 0.0124911
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0123307
APOLD1 apolipoprotein L domain containing 1 0.0122122
WRN Werner syndrome, RecQ helicase-like 0.0121447
DOCK5 dedicator of cytokinesis 5 0.0121027
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0120993
MCL1 myeloid cell leukemia 1 0.0120787
USP34 ubiquitin specific peptidase 34 0.0120492
PLIN2 perilipin 2 0.012002
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.011944
TCP1 t-complex 1 0.0119332
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0119179
ANGPTL4 angiopoietin-like 4 0.0117238
GCLC glutamate-cysteine ligase, catalytic subunit 0.0117015
STXBP1 syntaxin binding protein 1 0.0115606
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0115343
KARS1 lysyl-tRNA synthetase 1 0.0113214
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0112362
PUS7 pseudouridylate synthase 7 (putative) 0.0111984
ARF6 ADP-ribosylation factor 6 0.0111759
DARS1 aspartyl-tRNA synthetase 1 0.0110874
PACS1 phosphofurin acidic cluster sorting protein 1 0.0109496
EREG epiregulin 0.0109242
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 0.0108662
NRDC nardilysin convertase 0.0108606
RASA2 RAS p21 protein activator 2 0.0108088
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.0107908
STX2 syntaxin 2 0.0107465
RPS5 ribosomal protein S5 0.0107464
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0107442
HDGF hepatoma-derived growth factor 0.0105679
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0105548
FBXO17 F-box protein 17 0.0105409
PANK3 pantothenate kinase 3 0.0105111
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0105013
FAM120A family with sequence similarity 120A 0.010442
SERP1 stress-associated endoplasmic reticulum protein 1 0.0104381
ARFGEF3 ARFGEF family member 3 0.0103461
SNX3 sorting nexin 3 0.0103389
PIBF1 progesterone immunomodulatory binding factor 1 0.0102541
AKAP12 A kinase (PRKA) anchor protein 12 0.0102085
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 0.0101904
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 0.0101049
PHF3 PHD finger protein 3 0.0101002
POM121 POM121 transmembrane nucleoporin 0.0100171

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.204212
TP63 tumor protein p63 -0.152182
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.144184
CD44 CD44 molecule (Indian blood group) -0.143983
DST dystonin -0.132245
VIM vimentin -0.13147
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.124611
PSD3 pleckstrin and Sec7 domain containing 3 -0.120465
TMSB10 thymosin beta 10 -0.113006
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.111036
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.10797
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.103481
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0970362
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0969913
WARS1 tryptophanyl-tRNA synthetase 1 -0.0969807
TMSB4X thymosin beta 4, X-linked -0.0863626
RIGI RNA sensor RIG-I -0.0816923
PTMA prothymosin, alpha -0.0738021
DLG1 discs, large homolog 1 (Drosophila) -0.0711299
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0701424
SP100 SP100 nuclear antigen -0.0700058
FMNL2 formin-like 2 -0.0699112
LOC112694756 uncharaterized LOC112694756 -0.0683817
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0673791
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0647349
RUNX1 runt-related transcription factor 1 -0.064668
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0634064
LDHA lactate dehydrogenase A -0.0612195
DPYD dihydropyrimidine dehydrogenase -0.0573523
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0533707
BCAR3 breast cancer anti-estrogen resistance 3 -0.0532597
PDE10A phosphodiesterase 10A -0.052755
RAB27B RAB27B, member RAS oncogene family -0.0527517
APP amyloid beta (A4) precursor protein -0.0521861
EFNA5 ephrin-A5 -0.0519962
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0517057
PGK1 phosphoglycerate kinase 1 -0.0510475
RAB7A RAB7A, member RAS oncogene family -0.0508903
WWTR1 WW domain containing transcription regulator 1 -0.0476592
HLA-B major histocompatibility complex, class I, B -0.0469161
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0458785
ADGRG6 adhesion G protein-coupled receptor G6 -0.0455371
VCL vinculin -0.0445198
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0444827
FBXO11 F-box protein 11 -0.0431786
CMIP c-Maf inducing protein -0.0426233
IFIH1 interferon induced with helicase C domain 1 -0.0425157
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.042483
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0424093
CANX calnexin -0.0422251
WSB1 WD repeat and SOCS box containing 1 -0.0422229
TSC22D1 TSC22 domain family, member 1 -0.042083
AFF4 AF4/FMR2 family, member 4 -0.0420726
ARHGAP5 Rho GTPase activating protein 5 -0.0417904
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0417239
OGA O-GlcNAcase -0.0412356
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0398638
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0394818
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0394752
PLSCR1 phospholipid scramblase 1 -0.0394087
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0392109
CADM2 cell adhesion molecule 2 -0.0389019
RGS4 regulator of G-protein signaling 4 -0.0387836
ANKRD11 ankyrin repeat domain 11 -0.0375106
PTK2 protein tyrosine kinase 2 -0.0372769
RNF213 ring finger protein 213 -0.0369453
EZR ezrin -0.0369433
TRIO trio Rho guanine nucleotide exchange factor -0.0368493
CFAP299 cilia and flagella associated protein 299 -0.0363743
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta -0.0363503
LOXL2 lysyl oxidase-like 2 -0.0361198
CALR calreticulin -0.0355991
EPHA4 EPH receptor A4 -0.0351979
SMAD3 SMAD family member 3 -0.0351214
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0346664
JMJD1C jumonji domain containing 1C -0.0345312
SMYD3 SET and MYND domain containing 3 -0.0339074
MARCHF6 membrane associated ring-CH-type finger 6 -0.0336152
COL5A2 collagen, type V, alpha 2 -0.0334581
FUS FUS RNA binding protein -0.0334434
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0331313
H1-0 H1.0 linker histone -0.0325535
TPI1 triosephosphate isomerase 1 -0.0325423
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0318228
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0317865
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0314376
RBM39 RNA binding motif protein 39 -0.0314202
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0312234
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0312018
ZNFX1 zinc finger, NFX1-type containing 1 -0.031089
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0304663
LPP LIM domain containing preferred translocation partner in lipoma -0.0300607
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0300498
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0298829
SQSTM1 sequestosome 1 -0.0294336
DENND5A DENN/MADD domain containing 5A -0.0289366
TMEM41B transmembrane protein 41B -0.0287765
BMERB1 bMERB domain containing 1 -0.028704
MT2A metallothionein 2A -0.0286477
RPLP1 ribosomal protein, large, P1 -0.0284578