Dexamethasone_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.357362
PM20D1 peptidase M20 domain containing 1 0.287965
AKAP12 A kinase (PRKA) anchor protein 12 0.130489
PDE4D phosphodiesterase 4D, cAMP-specific 0.12032
NNMT nicotinamide N-methyltransferase 0.0899735
BIRC3 baculoviral IAP repeat containing 3 0.0865681
TOP2A topoisomerase (DNA) II alpha 170kDa 0.076443
FGA fibrinogen alpha chain 0.0727058
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0697303
FGB fibrinogen beta chain 0.0682338
MT1X metallothionein 1X 0.0681497
SRGN serglycin 0.0609159
UTRN utrophin 0.0573793
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0513126
AKAP13 A kinase (PRKA) anchor protein 13 0.0470902
ERRFI1 ERBB receptor feedback inhibitor 1 0.0453966
KLF6 Kruppel-like factor 6 0.0398698
WWOX WW domain containing oxidoreductase 0.039093
FGG fibrinogen gamma chain 0.0390426
SLC38A2 solute carrier family 38, member 2 0.0369507
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0364921
EFNA5 ephrin-A5 0.0356983
BICC1 BicC family RNA binding protein 1 0.033902
RAD51B RAD51 paralog B 0.0331113
NAMPT nicotinamide phosphoribosyltransferase 0.0326634
ANGPTL4 angiopoietin-like 4 0.0299018
JAK1 Janus kinase 1 0.0298025
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0291743
IGF2 insulin-like growth factor 2 0.0288546
NFIA nuclear factor I/A 0.0265311
TBC1D5 TBC1 domain family, member 5 0.0250163
FAM135A family with sequence similarity 135, member A 0.0245588
PHF20 PHD finger protein 20 0.0242086
ANKRD28 ankyrin repeat domain 28 0.0229651
DOCK5 dedicator of cytokinesis 5 0.0224294
LDHA lactate dehydrogenase A 0.0215656
ZMYND8 zinc finger, MYND-type containing 8 0.0214989
NTN4 netrin 4 0.021389
CD109 CD109 molecule 0.0204237
MBNL1 muscleblind-like splicing regulator 1 0.0201287
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0198806
NEBL nebulette 0.0198303
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.019805
ADGRG6 adhesion G protein-coupled receptor G6 0.0197673
PTPRM protein tyrosine phosphatase, receptor type, M 0.019758
ZBTB20 zinc finger and BTB domain containing 20 0.0195579
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0195379
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0194303
BIRC2 baculoviral IAP repeat containing 2 0.0191203
GPC6 glypican 6 0.0189161
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0188921
ZFHX3 zinc finger homeobox 3 0.0187459
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0179104
ACACA acetyl-CoA carboxylase alpha 0.0177934
CAVIN2 caveolae associated protein 2 0.0175591
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0175365
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0169244
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0168407
PLS3 plastin 3 0.0164994
SPIRE1 spire-type actin nucleation factor 1 0.0164755
TPD52 tumor protein D52 0.0162061
TNRC6B trinucleotide repeat containing 6B 0.0160101
MKI67 marker of proliferation Ki-67 0.0159012
FCHSD2 FCH and double SH3 domains 2 0.0158521
BRIX1 BRX1, biogenesis of ribosomes 0.0156962
GCLC glutamate-cysteine ligase, catalytic subunit 0.0156409
LAMB1 laminin, beta 1 0.0154065
PDS5A PDS5 cohesin associated factor A 0.0152301
USP34 ubiquitin specific peptidase 34 0.0151882
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0148484
NFE2L2 nuclear factor, erythroid 2-like 2 0.0147973
TPX2 TPX2, microtubule-associated 0.014782
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0147178
CHD9 chromodomain helicase DNA binding protein 9 0.0146897
ANXA1 annexin A1 0.0146816
CUL5 cullin 5 0.0146684
PDE8A phosphodiesterase 8A 0.0145488
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0145315
SBF2 SET binding factor 2 0.0143681
MYO19 myosin XIX 0.0142532
MAP4 microtubule-associated protein 4 0.014223
RSL1D1 ribosomal L1 domain containing 1 0.0141504
SPIDR scaffolding protein involved in DNA repair 0.0138934
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0138338
ZBTB38 zinc finger and BTB domain containing 38 0.0137912
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0137315
XPO1 exportin 1 0.0136887
MTDH metadherin 0.0136652
EGFR epidermal growth factor receptor 0.0136373
BMP5 bone morphogenetic protein 5 0.0136357
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0135171
ALCAM activated leukocyte cell adhesion molecule 0.0133925
SRP72 signal recognition particle 72kDa 0.0131375
AGFG1 ArfGAP with FG repeats 1 0.0130875
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0130489
FIGN fidgetin 0.0129032
DNAH5 dynein, axonemal, heavy chain 5 0.0126346
PER1 period circadian clock 1 0.0126134
IL6R interleukin 6 receptor 0.0125664
EPGN epithelial mitogen 0.0124683

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.33407
FTL ferritin, light polypeptide -0.214932
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.14034
TMSB10 thymosin beta 10 -0.139444
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.118717
VIM vimentin -0.105772
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.10068
FTH1 ferritin, heavy polypeptide 1 -0.099447
RPLP1 ribosomal protein, large, P1 -0.0771365
IER3 immediate early response 3 -0.0762281
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0760547
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0755149
TM4SF1 transmembrane 4 L six family member 1 -0.0722655
DOCK4 dedicator of cytokinesis 4 -0.0705715
RPL23 ribosomal protein L23 -0.065924
RPL19 ribosomal protein L19 -0.0604717
ACTG1 actin gamma 1 -0.0553824
CMIP c-Maf inducing protein -0.054063
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0534843
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0525039
ASPH aspartate beta-hydroxylase -0.049565
RPS19 ribosomal protein S19 -0.0481936
IGFBP3 insulin-like growth factor binding protein 3 -0.0453352
YBX1 Y box binding protein 1 -0.0430783
PFN1 profilin 1 -0.0418678
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0405693
FMNL2 formin-like 2 -0.0404443
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0377339
PKM pyruvate kinase, muscle -0.0377317
RPS12 ribosomal protein S12 -0.0371542
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0365713
S100A6 S100 calcium binding protein A6 -0.0362897
RPS8 ribosomal protein S8 -0.036158
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0359382
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0355881
SLC38A1 solute carrier family 38, member 1 -0.0354529
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0332477
SAMD4A sterile alpha motif domain containing 4A -0.0331084
HMGA1 high mobility group AT-hook 1 -0.0328315
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0319495
RPL35A ribosomal protein L35a -0.0318833
RPL31 ribosomal protein L31 -0.030499
S100A10 S100 calcium binding protein A10 -0.0304553
NAV3 neuron navigator 3 -0.0296544
RPS20 ribosomal protein S20 -0.029413
RPL11 ribosomal protein L11 -0.0288936
EGR1 early growth response 1 -0.0288785
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0282748
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0281618
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0281261
C15ORF48 chromosome 15 open reading frame 48 -0.0281015
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0280744
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0279878
TRIO trio Rho guanine nucleotide exchange factor -0.0266712
LOC112694756 uncharaterized LOC112694756 -0.0262635
RPS17 ribosomal protein S17 -0.0262572
IL6 interleukin 6 -0.0261905
HLA-B major histocompatibility complex, class I, B -0.0261698
MCL1 myeloid cell leukemia 1 -0.0259998
TPI1 triosephosphate isomerase 1 -0.0259464
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0258944
EXT1 exostosin glycosyltransferase 1 -0.0255825
RPL36 ribosomal protein L36 -0.0254887
EIF1 eukaryotic translation initiation factor 1 -0.025004
RPL8 ribosomal protein L8 -0.0249211
RAB7A RAB7A, member RAS oncogene family -0.0248853
USP3 ubiquitin specific peptidase 3 -0.0248669
RPL26 ribosomal protein L26 -0.0247208
ZFAND3 zinc finger, AN1-type domain 3 -0.0246029
S100A9 S100 calcium binding protein A9 -0.0243641
RPLP0 ribosomal protein, large, P0 -0.0243563
POTEF POTE ankyrin domain family, member F -0.0242498
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0241526
HLA-A major histocompatibility complex, class I, A -0.0240602
FAM107B family with sequence similarity 107, member B -0.0240477
RPS15 ribosomal protein S15 -0.0237769
PARD3 par-3 family cell polarity regulator -0.023668
RPL30 ribosomal protein L30 -0.0236275
RPL37A ribosomal protein L37a -0.0235938
RPL28 ribosomal protein L28 -0.0234283
SERF2 small EDRK-rich factor 2 -0.0232532
RPS21 ribosomal protein S21 -0.022823
TFPI2 tissue factor pathway inhibitor 2 -0.0227629
RPL34 ribosomal protein L34 -0.0224378
PTMA prothymosin, alpha -0.0223983
STC2 stanniocalcin 2 -0.0223811
RPL12 ribosomal protein L12 -0.0223446
TAGLN2 transgelin 2 -0.0220578
RPL37 ribosomal protein L37 -0.0218944
RPS23 ribosomal protein S23 -0.0218255
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0215704
RPS27A ribosomal protein S27a -0.021564
PRDX1 peroxiredoxin 1 -0.0213505
S100A11 S100 calcium binding protein A11 -0.0208243
EEF1G eukaryotic translation elongation factor 1 gamma -0.0207548
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0206297
RPS16 ribosomal protein S16 -0.020613
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.020598
NDRG1 N-myc downstream regulated 1 -0.020489
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0203189