Dexamethasone_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.180665
ESYT2 extended synaptotagmin-like protein 2 0.115978
NALF1 NALCN channel auxiliary factor 1 0.101048
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0982101
ELL2 elongation factor, RNA polymerase II, 2 0.0978925
S100P S100 calcium binding protein P 0.084623
TOP1 topoisomerase (DNA) I 0.0817694
KCMF1 potassium channel modulatory factor 1 0.0817145
PICALM phosphatidylinositol binding clathrin assembly protein 0.0759849
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.074901
IGF2 insulin-like growth factor 2 0.0746427
TXNRD1 thioredoxin reductase 1 0.0743434
SACK1A scaffolding CK1 anchoring protein A 0.0728939
NCOA3 nuclear receptor coactivator 3 0.0726409
EFNA5 ephrin-A5 0.0666571
NCKAP1 NCK-associated protein 1 0.0665582
DNER delta/notch-like EGF repeat containing 0.0652939
TSC22D2 TSC22 domain family, member 2 0.0632762
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0620562
DSPP dentin sialophosphoprotein 0.0618198
UGCG UDP-glucose ceramide glucosyltransferase 0.0612523
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0603434
FNDC3B fibronectin type III domain containing 3B 0.059081
ZFC3H1 zinc finger, C3H1-type containing 0.0589296
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0584011
BZW1 basic leucine zipper and W2 domains 1 0.0577873
SLTM SAFB-like, transcription modulator 0.0559458
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0547585
PM20D1 peptidase M20 domain containing 1 0.0543352
AKAP12 A kinase (PRKA) anchor protein 12 0.0543183
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0541206
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0540247
LMO7 LIM domain 7 0.052694
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.052321
S100A9 S100 calcium binding protein A9 0.0518454
FNDC3A fibronectin type III domain containing 3A 0.0513442
BIRC3 baculoviral IAP repeat containing 3 0.0512504
DTNA dystrobrevin, alpha 0.0502897
HOMER2 homer scaffolding protein 2 0.0485814
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0485254
HSPH1 heat shock 105kDa/110kDa protein 1 0.0482684
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0478304
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.047384
CCNY cyclin Y 0.0473612
PNRC1 proline-rich nuclear receptor coactivator 1 0.0469817
PIAS1 protein inhibitor of activated STAT, 1 0.0465451
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0463218
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0461797
KRT6A keratin 6A, type II 0.0460981
USP3 ubiquitin specific peptidase 3 0.0460518
RNF145 ring finger protein 145 0.0457725
CTNND1 catenin (cadherin-associated protein), delta 1 0.0455359
IRS2 insulin receptor substrate 2 0.044484
IQGAP1 IQ motif containing GTPase activating protein 1 0.0437713
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0437706
VIRMA vir like m6A methyltransferase associated 0.0433484
HELZ helicase with zinc finger 0.0427851
MEF2A myocyte enhancer factor 2A 0.0421409
FAM13A family with sequence similarity 13, member A 0.0412655
RIOK3 RIO kinase 3 0.0411305
CENPF centromere protein F, 350/400kDa 0.0408945
FTH1 ferritin, heavy polypeptide 1 0.0406774
YY1AP1 YY1 associated protein 1 0.039907
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0396703
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0390202
LAMB3 laminin, beta 3 0.0389997
SGPP2 sphingosine-1-phosphate phosphatase 2 0.0389728
TMEM165 transmembrane protein 165 0.0383388
TXNIP thioredoxin interacting protein 0.0382868
MORC3 MORC family CW-type zinc finger 3 0.0382114
GPBP1 GC-rich promoter binding protein 1 0.0375258
DLG1 discs, large homolog 1 (Drosophila) 0.0374269
TES testin LIM domain protein 0.0372266
RAB7A RAB7A, member RAS oncogene family 0.0371661
DOCK4 dedicator of cytokinesis 4 0.0371517
ANKRD37 ankyrin repeat domain 37 0.0370897
AKAP13 A kinase (PRKA) anchor protein 13 0.0366988
FAF1 Fas (TNFRSF6) associated factor 1 0.0365731
LPP LIM domain containing preferred translocation partner in lipoma 0.0356976
ATXN1 ataxin 1 0.0356461
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0352517
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0352409
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0350721
USP47 ubiquitin specific peptidase 47 0.0346989
CD109 CD109 molecule 0.0345288
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0340527
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0339661
WDR45B WD repeat domain 45B 0.033556
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0334276
PTBP2 polypyrimidine tract binding protein 2 0.0329732
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0325265
RYBP RING1 and YY1 binding protein 0.032349
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.032325
RLF rearranged L-myc fusion 0.0319712
SIK3 SIK family kinase 3 0.0315878
KDM6A lysine (K)-specific demethylase 6A 0.0314808
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0312781
SPAG9 sperm associated antigen 9 0.0311267
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0309984
EIF1 eukaryotic translation initiation factor 1 0.0307968

decreased expression

Symbol Name Standardized Value
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.186867
PTMA prothymosin, alpha -0.110913
VIM vimentin -0.084362
RPL26 ribosomal protein L26 -0.0790771
RPLP1 ribosomal protein, large, P1 -0.078062
UBC ubiquitin C -0.0773862
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0745626
ASPH aspartate beta-hydroxylase -0.0730778
IER3 immediate early response 3 -0.072961
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0652749
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0625369
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0616324
VMP1 vacuole membrane protein 1 -0.0597371
ENO1 enolase 1, (alpha) -0.05733
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -0.0569089
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0536738
JUN jun proto-oncogene -0.0517104
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0510948
RPS8 ribosomal protein S8 -0.0504485
SQSTM1 sequestosome 1 -0.0504064
MCL1 myeloid cell leukemia 1 -0.0499826
CD2AP CD2-associated protein -0.0498655
EIF4A3 eukaryotic translation initiation factor 4A3 -0.0485224
LOC112694756 uncharaterized LOC112694756 -0.0466577
SMAD3 SMAD family member 3 -0.0455014
SYT1 synaptotagmin I -0.0454899
B2M beta-2-microglobulin -0.0437086
RPL37A ribosomal protein L37a -0.0432318
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0431988
LOC102724023 ES1 protein homolog, mitochondrial -0.0430909
BCAS3 breast carcinoma amplified sequence 3 -0.0429553
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0418912
RNF213 ring finger protein 213 -0.0408193
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0398863
TNRC6B trinucleotide repeat containing 6B -0.0393047
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0391064
CANX calnexin -0.0382037
BHLHE40 basic helix-loop-helix family, member e40 -0.0377895
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0377416
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0374794
STK4 serine/threonine kinase 4 -0.0372761
RPL35A ribosomal protein L35a -0.0371423
NIPSNAP2 nipsnap homolog 2 -0.0369857
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0366433
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0365467
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0362377
ANXA2 annexin A2 -0.0361301
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0360924
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0359226
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0359101
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0356692
FNIP1 folliculin interacting protein 1 -0.0355108
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.035289
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0352849
TOX thymocyte selection-associated high mobility group box -0.0350781
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0342629
MATR3 matrin 3 -0.0341919
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0339291
TPT1 tumor protein, translationally-controlled 1 -0.0338033
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0336979
SEPTIN2 septin 2 -0.0336359
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0333964
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0329922
CSDE1 cold shock domain containing E1, RNA-binding -0.0329776
PNN pinin, desmosome associated protein -0.032977
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.032948
CALR calreticulin -0.0327906
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0326443
FUS FUS RNA binding protein -0.0324021
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0323159
AHNAK AHNAK nucleoprotein -0.0321307
NDRG1 N-myc downstream regulated 1 -0.0321207
H3-3B H3.3 histone B -0.0320293
ARB2A ARB2 cotranscriptional regulator A -0.0318623
GPATCH2L G patch domain containing 2-like -0.0317655
RAB6A RAB6A, member RAS oncogene family -0.0316707
GPC6 glypican 6 -0.0316657
TBC1D22A TBC1 domain family, member 22A -0.031633
EEF1G eukaryotic translation elongation factor 1 gamma -0.0316105
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0314532
ARRDC3 arrestin domain containing 3 -0.031322
RPL19 ribosomal protein L19 -0.0312628
DDIT4 DNA-damage-inducible transcript 4 -0.0309414
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0308555
MIER1 mesoderm induction early response 1, transcriptional regulator -0.0307212
RPS4X ribosomal protein S4, X-linked -0.0302744
PLEC plectin -0.0298831
ACTN4 actinin, alpha 4 -0.0297409
SLC38A2 solute carrier family 38, member 2 -0.0296264
SRSF4 serine/arginine-rich splicing factor 4 -0.0295661
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.029435
ARL15 ADP-ribosylation factor-like 15 -0.029254
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0289659
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0289449
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0287665
ZBTB20 zinc finger and BTB domain containing 20 -0.028748
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0284718
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0283635
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.028044
FAM107B family with sequence similarity 107, member B -0.0279198