Dexamethasone_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.34408
PDE4D phosphodiesterase 4D, cAMP-specific 0.184429
GDA guanine deaminase 0.176359
SRGN serglycin 0.148956
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.137506
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.126692
WDFY2 WD repeat and FYVE domain containing 2 0.0791557
NAMPT nicotinamide phosphoribosyltransferase 0.0689138
SORBS2 sorbin and SH3 domain containing 2 0.0668201
PHF20 PHD finger protein 20 0.0631599
AGTPBP1 ATP/GTP binding protein 1 0.0626155
DNER delta/notch-like EGF repeat containing 0.0604398
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0601002
NALF1 NALCN channel auxiliary factor 1 0.0580297
TGFBI transforming growth factor, beta-induced, 68kDa 0.0513418
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0484565
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0462974
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0462616
MGST1 microsomal glutathione S-transferase 1 0.0461336
AGFG1 ArfGAP with FG repeats 1 0.044926
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0443789
RGS2 regulator of G-protein signaling 2 0.0439206
CHD1 chromodomain helicase DNA binding protein 1 0.0431156
BASP1 brain abundant, membrane attached signal protein 1 0.0426892
AKAP12 A kinase (PRKA) anchor protein 12 0.0415096
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0408175
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0392541
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0382683
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0378236
DST dystonin 0.0370512
HIPK2 homeodomain interacting protein kinase 2 0.0368981
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0357835
CSNK1A1 casein kinase 1, alpha 1 0.0355829
SMYD3 SET and MYND domain containing 3 0.0348216
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0339556
SLC38A2 solute carrier family 38, member 2 0.0336509
TXNIP thioredoxin interacting protein 0.0335259
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.0335199
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0335179
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0334263
BZW1 basic leucine zipper and W2 domains 1 0.0322819
ESYT2 extended synaptotagmin-like protein 2 0.0322741
TOP1 topoisomerase (DNA) I 0.0307986
NFIA nuclear factor I/A 0.0307438
CHML choroideremia-like (Rab escort protein 2) 0.030214
KYNU kynureninase 0.0294645
CHL1 cell adhesion molecule L1-like 0.0292287
ENAH enabled homolog (Drosophila) 0.0287225
SSBP2 single-stranded DNA binding protein 2 0.0281644
ZFHX3 zinc finger homeobox 3 0.027733
ERRFI1 ERBB receptor feedback inhibitor 1 0.0273893
PTPRM protein tyrosine phosphatase, receptor type, M 0.0272877
TXNRD1 thioredoxin reductase 1 0.0271899
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0270678
DPYD dihydropyrimidine dehydrogenase 0.0270073
ENO1 enolase 1, (alpha) 0.0267997
ZMYND8 zinc finger, MYND-type containing 8 0.0265757
RBM39 RNA binding motif protein 39 0.0261502
SLF1 SMC5-SMC6 complex localization factor 1 0.0258864
MT2A metallothionein 2A 0.0256889
FNDC3A fibronectin type III domain containing 3A 0.0251861
DOCK5 dedicator of cytokinesis 5 0.0251381
MFF mitochondrial fission factor 0.0249278
SAMD8 sterile alpha motif domain containing 8 0.0248728
HEATR1 HEAT repeat containing 1 0.024657
FKBP5 FK506 binding protein 5 0.0244282
PRKD3 protein kinase D3 0.0241622
CAVIN2 caveolae associated protein 2 0.0240105
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0239307
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0237625
ADGRG6 adhesion G protein-coupled receptor G6 0.0237358
ADGRB3 adhesion G protein-coupled receptor B3 0.0236511
LDHA lactate dehydrogenase A 0.0230282
OPN3 opsin 3 0.0230069
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0229005
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0228439
IRS2 insulin receptor substrate 2 0.0223081
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.0218909
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0218055
ZFP36L1 ZFP36 ring finger protein-like 1 0.0216739
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0216465
SDC2 syndecan 2 0.0215571
USP9X ubiquitin specific peptidase 9, X-linked 0.0211567
ELL2 elongation factor, RNA polymerase II, 2 0.0210151
PDE10A phosphodiesterase 10A 0.0207129
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.020625
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0202033
ANXA1 annexin A1 0.0198856
PID1 phosphotyrosine interaction domain containing 1 0.0198009
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0197415
VCL vinculin 0.0196654
MBNL2 muscleblind-like splicing regulator 2 0.0192614
RTN1 reticulon 1 0.0190373
MT1X metallothionein 1X 0.0190304
DDIT4 DNA-damage-inducible transcript 4 0.0189547
UGP2 UDP-glucose pyrophosphorylase 2 0.0188636
INTS6 integrator complex subunit 6 0.0186267
ZFAND5 zinc finger, AN1-type domain 5 0.0182318
RPGR retinitis pigmentosa GTPase regulator 0.0182249
KLF9 Kruppel-like factor 9 0.0181636

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.190256
PSD3 pleckstrin and Sec7 domain containing 3 -0.161538
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.145062
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0955743
CXCL8 chemokine (C-X-C motif) ligand 8 -0.093931
CDH13 cadherin 13 -0.0925828
ASPH aspartate beta-hydroxylase -0.0857973
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0805862
DOCK4 dedicator of cytokinesis 4 -0.0789781
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0740809
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0738437
IGFBP3 insulin-like growth factor binding protein 3 -0.0698414
FN1 fibronectin 1 -0.0685343
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0652349
MAP7 microtubule-associated protein 7 -0.0565514
P3H2 prolyl 3-hydroxylase 2 -0.0552975
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0544026
CREB5 cAMP responsive element binding protein 5 -0.0523099
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0518321
RPLP1 ribosomal protein, large, P1 -0.0496664
TM4SF1 transmembrane 4 L six family member 1 -0.0480746
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0470771
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0461012
TGFBR1 transforming growth factor, beta receptor 1 -0.0455732
VIM vimentin -0.0454593
TFPI2 tissue factor pathway inhibitor 2 -0.045236
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0432574
FTL ferritin, light polypeptide -0.0418263
TPT1 tumor protein, translationally-controlled 1 -0.0411761
CD44 CD44 molecule (Indian blood group) -0.0401804
INHBA inhibin, beta A -0.0400623
MYOF myoferlin -0.0399891
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0381421
COL5A2 collagen, type V, alpha 2 -0.0379314
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.037848
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0372223
NBEAL1 neurobeachin-like 1 -0.0367194
SPAG9 sperm associated antigen 9 -0.0363925
LSAMP limbic system-associated membrane protein -0.0360693
SQSTM1 sequestosome 1 -0.0349927
NDRG1 N-myc downstream regulated 1 -0.0348933
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0344128
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0338006
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0324771
SH3KBP1 SH3-domain kinase binding protein 1 -0.0322485
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.032081
FMNL2 formin-like 2 -0.0320449
NCKAP5 NCK-associated protein 5 -0.0320352
CTBP2 C-terminal binding protein 2 -0.0305967
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.030213
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0297795
IER3 immediate early response 3 -0.0290487
SMOC1 SPARC related modular calcium binding 1 -0.0288016
GRB10 growth factor receptor-bound protein 10 -0.0287555
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0286233
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0274215
BMERB1 bMERB domain containing 1 -0.0274066
COL4A5 collagen, type IV, alpha 5 -0.0273131
PRKN parkin RBR E3 ubiquitin protein ligase -0.0271543
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0270023
FTH1 ferritin, heavy polypeptide 1 -0.0268996
PALLD palladin, cytoskeletal associated protein -0.0265387
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0263564
FNDC3B fibronectin type III domain containing 3B -0.0261128
RPL35A ribosomal protein L35a -0.0259569
MAP1B microtubule-associated protein 1B -0.0258388
S100A6 S100 calcium binding protein A6 -0.0256838
SOD2 superoxide dismutase 2, mitochondrial -0.0255772
UNC5D unc-5 homolog D (C. elegans) -0.0255469
GRAMD1B GRAM domain containing 1B -0.0255324
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0252842
EZR ezrin -0.0251816
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0250989
EXT1 exostosin glycosyltransferase 1 -0.0250363
GLIS3 GLIS family zinc finger 3 -0.0244116
SOX4 SRY (sex determining region Y)-box 4 -0.0233908
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0231942
MYO10 myosin X -0.0228694
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0228119
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0228109
CTNND2 catenin (cadherin-associated protein), delta 2 -0.0228025
CAMTA1 calmodulin binding transcription activator 1 -0.022605
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0224895
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0221904
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0220008
HLA-A major histocompatibility complex, class I, A -0.0218472
CTSL cathepsin L -0.0218182
IFIH1 interferon induced with helicase C domain 1 -0.0217569
RIGI RNA sensor RIG-I -0.0217128
RPL26 ribosomal protein L26 -0.0214859
WARS1 tryptophanyl-tRNA synthetase 1 -0.0213311
PTMA prothymosin, alpha -0.0213188
KDM7A lysine (K)-specific demethylase 7A -0.0212635
XYLT1 xylosyltransferase I -0.0211992
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0210253
RPL13A ribosomal protein L13a -0.020834
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0205648
ESM1 endothelial cell-specific molecule 1 -0.0205297
PDE7B phosphodiesterase 7B -0.0205079
TTC28 tetratricopeptide repeat domain 28 -0.0204807