Dexamethasone_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dexamethasone perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dexamethasone_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.12695
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.102589
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0854796
FKBP5 FK506 binding protein 5 0.0801433
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0775919
WSB1 WD repeat and SOCS box containing 1 0.0750196
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0736963
PLPP1 phospholipid phosphatase 1 0.0721456
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0709037
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0708407
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0675
ENO1 enolase 1, (alpha) 0.0654799
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0642564
VIM vimentin 0.0635599
RPS6 ribosomal protein S6 0.0593209
EIF1 eukaryotic translation initiation factor 1 0.0552589
GNAS GNAS complex locus 0.0530261
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.050576
NPAS3 neuronal PAS domain protein 3 0.0493217
H1-0 H1.0 linker histone 0.0487007
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0476095
OGA O-GlcNAcase 0.0458688
PDIA6 protein disulfide isomerase family A, member 6 0.0454926
PHIP pleckstrin homology domain interacting protein 0.0442569
RPS5 ribosomal protein S5 0.0442305
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0440399
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.043909
WASF2 WAS protein family, member 2 0.043338
MDK midkine (neurite growth-promoting factor 2) 0.0433222
PTMA prothymosin, alpha 0.0417317
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0407643
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0404352
SET SET nuclear proto-oncogene 0.040373
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.040083
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0399762
RPS12 ribosomal protein S12 0.0399494
TPT1 tumor protein, translationally-controlled 1 0.0395834
APLP2 amyloid beta (A4) precursor-like protein 2 0.0391621
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0386542
GARS1 glycyl-tRNA synthetase 1 0.0383491
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0381948
RPS16 ribosomal protein S16 0.0381611
TPX2 TPX2, microtubule-associated 0.0381118
GREB1L growth regulation by estrogen in breast cancer-like 0.0376914
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0375788
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0373892
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0373353
EMP1 epithelial membrane protein 1 0.036942
RSL1D1 ribosomal L1 domain containing 1 0.0366294
RPL7 ribosomal protein L7 0.0365276
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.03641
PCDH9 protocadherin 9 0.0361123
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0359143
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0354724
SEPTIN7 septin 7 0.0348227
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0348152
PCDH7 protocadherin 7 0.0347634
SKIC3 SKI3 subunit of superkiller complex 0.0344889
RPL36A ribosomal protein L36a 0.0343344
RPS8 ribosomal protein S8 0.03422
TENM2 teneurin transmembrane protein 2 0.0339961
NSUN6 NOP2/Sun domain family, member 6 0.0334031
RPS2 ribosomal protein S2 0.0333868
ZFP36L1 ZFP36 ring finger protein-like 1 0.0329903
RACK1 receptor for activated C kinase 1 0.0329114
BRDT bromodomain, testis-specific 0.0329058
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0329022
PGK1 phosphoglycerate kinase 1 0.0327107
AKAP12 A kinase (PRKA) anchor protein 12 0.0325182
SSBP2 single-stranded DNA binding protein 2 0.0316043
POU3F2 POU class 3 homeobox 2 0.0312487
ACTG1 actin gamma 1 0.0309869
SRSF11 serine/arginine-rich splicing factor 11 0.0303979
RPLP1 ribosomal protein, large, P1 0.030389
YY1 YY1 transcription factor 0.030345
HTATSF1 HIV-1 Tat specific factor 1 0.0302792
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.03023
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0301778
SPTSSA serine palmitoyltransferase, small subunit A 0.030019
PA2G4 proliferation-associated 2G4, 38kDa 0.0300167
TPM4 tropomyosin 4 0.0297616
KHSRP KH-type splicing regulatory protein 0.0295154
ZMYND8 zinc finger, MYND-type containing 8 0.029356
TCEA1 transcription elongation factor A (SII), 1 0.0292534
DSTN destrin (actin depolymerizing factor) 0.0289722
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0288855
RAP1B RAP1B, member of RAS oncogene family 0.0284622
CALR calreticulin 0.0283346
RPL36 ribosomal protein L36 0.0283109
TUBA1B tubulin, alpha 1b 0.028304
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0282143
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.028099
STAG2 stromal antigen 2 0.0280976
BZW1 basic leucine zipper and W2 domains 1 0.0280044
ARHGAP12 Rho GTPase activating protein 12 0.0278512
RPL35A ribosomal protein L35a 0.0278188
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0276354
NUSAP1 nucleolar and spindle associated protein 1 0.0273558
PRRC2B proline-rich coiled-coil 2B 0.0272936
RPL37 ribosomal protein L37 0.0270924

decreased expression

Symbol Name Standardized Value
SPAG9 sperm associated antigen 9 -0.101792
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0971558
HDAC9 histone deacetylase 9 -0.0895677
COL5A2 collagen, type V, alpha 2 -0.0885767
PRKD1 protein kinase D1 -0.0635871
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0622925
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0604833
COL11A1 collagen, type XI, alpha 1 -0.0596231
PARD3B par-3 family cell polarity regulator beta -0.0544545
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0543488
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0536035
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0515218
FNDC3B fibronectin type III domain containing 3B -0.0514401
SAMD4A sterile alpha motif domain containing 4A -0.0502168
TRIO trio Rho guanine nucleotide exchange factor -0.045428
ZFAND3 zinc finger, AN1-type domain 3 -0.0441523
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0434972
NRG1 neuregulin 1 -0.0422825
FNDC3A fibronectin type III domain containing 3A -0.0413658
TSC22D2 TSC22 domain family, member 2 -0.0403705
SMYD3 SET and MYND domain containing 3 -0.038387
CADM2 cell adhesion molecule 2 -0.0374116
RASAL2 RAS protein activator like 2 -0.0364357
APP amyloid beta (A4) precursor protein -0.0359172
HMGA2 high mobility group AT-hook 2 -0.0355927
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0354129
GSE1 Gse1 coiled-coil protein -0.0350532
DSCAM Down syndrome cell adhesion molecule -0.0348977
RIGI RNA sensor RIG-I -0.0348151
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0347662
MEIS2 Meis homeobox 2 -0.0342437
ADGRL3 adhesion G protein-coupled receptor L3 -0.0338269
WDR26 WD repeat domain 26 -0.0336197
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0334241
UBE3A ubiquitin protein ligase E3A -0.0331724
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0314374
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0312396
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0311008
FNIP1 folliculin interacting protein 1 -0.0309844
BCLAF1 BCL2-associated transcription factor 1 -0.0309484
CRY1 cryptochrome circadian clock 1 -0.030753
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0306457
TTC28 tetratricopeptide repeat domain 28 -0.0303406
FOXP2 forkhead box P2 -0.0301999
KMT2C lysine (K)-specific methyltransferase 2C -0.0299473
CABLES1 Cdk5 and Abl enzyme substrate 1 -0.0297612
PDGFC platelet derived growth factor C -0.02962
ATXN1 ataxin 1 -0.0296025
MAN1A2 mannosidase, alpha, class 1A, member 2 -0.0294842
ICE1 interactor of little elongation complex ELL subunit 1 -0.0293711
ELOVL5 ELOVL fatty acid elongase 5 -0.0293181
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0292801
TRPS1 trichorhinophalangeal syndrome I -0.0288492
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0284475
SUCO SUN domain containing ossification factor -0.0281889
TFRC transferrin receptor -0.0278435
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0278078
AFF1 AF4/FMR2 family, member 1 -0.0277001
ANKRD17 ankyrin repeat domain 17 -0.0269634
TBL1X transducin (beta)-like 1X-linked -0.0267852
TAPBP TAP binding protein (tapasin) -0.0265628
FOXK1 forkhead box K1 -0.0261936
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0261516
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 -0.025891
FBXO11 F-box protein 11 -0.0258384
BTBD9 BTB (POZ) domain containing 9 -0.0258359
USP25 ubiquitin specific peptidase 25 -0.0258219
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 -0.0257849
CCDC138 coiled-coil domain containing 138 -0.0253887
PGAP1 post-GPI attachment to proteins 1 -0.0253027
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0250824
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 -0.024984
TOR1AIP2 torsin A interacting protein 2 -0.0249374
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0249328
AEBP2 AE binding protein 2 -0.0248231
TGFB2 transforming growth factor, beta 2 -0.0247228
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0246727
CSMD3 CUB and Sushi multiple domains 3 -0.0246298
CSRNP3 cysteine-serine-rich nuclear protein 3 -0.0243606
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0243118
UPP1 uridine phosphorylase 1 -0.0242808
SVIL supervillin -0.0242611
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.024252
ZC3H12B zinc finger CCCH-type containing 12B -0.0242288
RIMS2 regulating synaptic membrane exocytosis 2 -0.0241915
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0241398
CAMKMT calmodulin-lysine N-methyltransferase -0.0240478
ZNF638 zinc finger protein 638 -0.0240009
FGF13 fibroblast growth factor 13 -0.0239448
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0238887
METAP2 methionyl aminopeptidase 2 -0.0237769
OASL 2'-5'-oligoadenylate synthetase-like -0.023775
TAS2R14 taste receptor, type 2, member 14 -0.0237309
EXOC2 exocyst complex component 2 -0.023714
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0235199
DICER1 dicer 1, ribonuclease type III -0.0235147
COG6 component of oligomeric golgi complex 6 -0.0234745
MTCL1 microtubule crosslinking factor 1 -0.0232466
CHD7 chromodomain helicase DNA binding protein 7 -0.0231432
IPO7 importin 7 -0.0230461