Dihydroartemisinin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dihydroartemisinin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dihydroartemisinin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LDHA lactate dehydrogenase A 0.192869
RPL3 ribosomal protein L3 0.184143
KRT18 keratin 18, type I 0.179875
VEGFA vascular endothelial growth factor A 0.142184
RPL13A ribosomal protein L13a 0.124457
ITGA6 integrin, alpha 6 0.121438
CANX calnexin 0.119398
LMO7 LIM domain 7 0.114784
EEF2 eukaryotic translation elongation factor 2 0.109084
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0841966
AREG amphiregulin 0.0779394
FLNB filamin B, beta 0.0778153
MYH9 myosin, heavy chain 9, non-muscle 0.0748082
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0718658
HDLBP high density lipoprotein binding protein 0.071043
RPL18A ribosomal protein L18a 0.0653296
SRRM2 serine/arginine repetitive matrix 2 0.0640434
APP amyloid beta (A4) precursor protein 0.0606002
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0603954
EIF1 eukaryotic translation initiation factor 1 0.0603482
FAT1 FAT atypical cadherin 1 0.0565436
DSPP dentin sialophosphoprotein 0.0562414
EZR ezrin 0.0547784
MPRIP myosin phosphatase Rho interacting protein 0.0547249
H1-0 H1.0 linker histone 0.0536478
ONECUT3 one cut homeobox 3 0.0529706
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0508407
TMSB4X thymosin beta 4, X-linked 0.0502294
DDIT4 DNA-damage-inducible transcript 4 0.048564
DSCAM Down syndrome cell adhesion molecule 0.0485329
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0473191
MYO1E myosin IE 0.047041
MYH14 myosin, heavy chain 14, non-muscle 0.0467726
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0454114
ERRFI1 ERBB receptor feedback inhibitor 1 0.0452032
AHNAK AHNAK nucleoprotein 0.0451494
HSPA8 heat shock 70kDa protein 8 0.044861
APLP2 amyloid beta (A4) precursor-like protein 2 0.0436436
TTC3 tetratricopeptide repeat domain 3 0.0430621
NCOR2 nuclear receptor corepressor 2 0.0426544
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0426471
EXT1 exostosin glycosyltransferase 1 0.0426272
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0420938
SET SET nuclear proto-oncogene 0.0418754
RPS4X ribosomal protein S4, X-linked 0.0416429
ITPRID2 ITPR interacting domain containing 2 0.0406358
MACF1 microtubule-actin crosslinking factor 1 0.040287
PLEC plectin 0.0400827
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0389951
RPL11 ribosomal protein L11 0.038161
NEBL nebulette 0.0375986
PIGR polymeric immunoglobulin receptor 0.0371721
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0367089
ANXA11 annexin A11 0.036143
NUMA1 nuclear mitotic apparatus protein 1 0.0360686
TPM3 tropomyosin 3 0.0354841
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0352646
SAMD4A sterile alpha motif domain containing 4A 0.0346054
RPL4 ribosomal protein L4 0.034347
CLIP2 CAP-GLY domain containing linker protein 2 0.0341784
LAMB3 laminin, beta 3 0.0328197
MANF mesencephalic astrocyte-derived neurotrophic factor 0.0327384
ZFAND3 zinc finger, AN1-type domain 3 0.0327146
PATJ PATJ crumbs cell polarity complex component 0.0326721
EIF4A2 eukaryotic translation initiation factor 4A2 0.0324279
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0322669
PCBP2 poly(rC) binding protein 2 0.0321827
CADPS Ca++-dependent secretion activator 0.0316827
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0314764
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0313845
BACE2 beta-site APP-cleaving enzyme 2 0.0312466
CEMIP cell migration inducing protein, hyaluronan binding 0.030967
KDM3A lysine (K)-specific demethylase 3A 0.030624
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.030219
CPNE1 copine I 0.0301371
MCL1 myeloid cell leukemia 1 0.0294402
MYO18A myosin XVIIIA 0.0291206
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0287478
DNM2 dynamin 2 0.0285769
KLF5 Kruppel-like factor 5 (intestinal) 0.0285022
RBM39 RNA binding motif protein 39 0.0282332
AARS1 alanyl-tRNA synthetase 1 0.0282214
SOS1 son of sevenless homolog 1 (Drosophila) 0.0280556
LAMA4 laminin, alpha 4 0.0279096
TTC17 tetratricopeptide repeat domain 17 0.0279004
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0278279
CALR calreticulin 0.0277477
MYO5B myosin VB 0.0272441
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0272423
HDGF hepatoma-derived growth factor 0.0271848
AFF1 AF4/FMR2 family, member 1 0.0271445
YTHDC1 YTH domain containing 1 0.0271258
GRB10 growth factor receptor-bound protein 10 0.0269532
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.02695
SVIL supervillin 0.0269382
TPM4 tropomyosin 4 0.0268123
GDF15 growth differentiation factor 15 0.0266335
SQSTM1 sequestosome 1 0.0265755
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0263256
CTBP2 C-terminal binding protein 2 0.0261334

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.258792
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.122606
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0992876
MUC6 mucin 6, oligomeric mucus/gel-forming -0.090442
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0852015
TMSB10 thymosin beta 10 -0.0656408
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0633422
NDRG1 N-myc downstream regulated 1 -0.0596557
HMGA1 high mobility group AT-hook 1 -0.0547622
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0519428
NPSR1 neuropeptide S receptor 1 -0.0430059
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0422605
PTBP3 polypyrimidine tract binding protein 3 -0.0414037
TPT1 tumor protein, translationally-controlled 1 -0.0382321
POTEF POTE ankyrin domain family, member F -0.0380717
TNS4 tensin 4 -0.0340153
TXNIP thioredoxin interacting protein -0.0340148
GPHN gephyrin -0.0339593
PDIA3 protein disulfide isomerase family A, member 3 -0.0337597
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.033342
RPL21 ribosomal protein L21 -0.0311714
RPL35A ribosomal protein L35a -0.0310404
RPLP0 ribosomal protein, large, P0 -0.0297488
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0297214
KRT19 keratin 19, type I -0.0285103
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0275063
FOSL1 FOS-like antigen 1 -0.0265377
PFN1 profilin 1 -0.026487
S100A6 S100 calcium binding protein A6 -0.026364
RPS6 ribosomal protein S6 -0.0261589
CD46 CD46 molecule, complement regulatory protein -0.0260442
PERP PERP, TP53 apoptosis effector -0.0259467
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0256296
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0254291
ZNF292 zinc finger protein 292 -0.0251404
VDAC1 voltage-dependent anion channel 1 -0.0247728
HILPDA hypoxia inducible lipid droplet-associated -0.0241734
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0238325
RPS25 ribosomal protein S25 -0.0236376
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0235198
TFF3 trefoil factor 3 (intestinal) -0.0233149
RPLP2 ribosomal protein, large, P2 -0.0231863
S100A10 S100 calcium binding protein A10 -0.0231362
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0227007
TUBA1B tubulin, alpha 1b -0.0221156
RPS19 ribosomal protein S19 -0.0217708
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0212754
MLEC malectin -0.0210077
RPL36A ribosomal protein L36a -0.0207843
LGALS4 lectin, galactoside-binding, soluble, 4 -0.0203904
RPS24 ribosomal protein S24 -0.0202047
ACTG1 actin gamma 1 -0.0201712
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0201543
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.019943
INSIG1 insulin induced gene 1 -0.0198844
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0196792
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0193123
TMEM123 transmembrane protein 123 -0.0189937
CYB5R3 cytochrome b5 reductase 3 -0.0189337
RPL7A ribosomal protein L7a -0.0187311
RYBP RING1 and YY1 binding protein -0.0184161
CBX3 chromobox homolog 3 -0.0182535
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0181475
TM9SF3 transmembrane 9 superfamily member 3 -0.017727
PTPRR protein tyrosine phosphatase, receptor type, R -0.0175656
CDC42SE2 CDC42 small effector 2 -0.017369
MAGT1 magnesium transporter 1 -0.0173626
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0173308
EGR1 early growth response 1 -0.0173078
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0171602
DLG1 discs, large homolog 1 (Drosophila) -0.017143
LYZ lysozyme -0.0171393
RPS2 ribosomal protein S2 -0.016804
MUC17 mucin 17, cell surface associated -0.0167844
GSTP1 glutathione S-transferase pi 1 -0.0167599
FHIT fragile histidine triad -0.0165182
PHGR1 proline/histidine/glycine-rich 1 -0.0163619
FTH1 ferritin, heavy polypeptide 1 -0.0163349
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0160891
S100A9 S100 calcium binding protein A9 -0.0160379
EIF3M eukaryotic translation initiation factor 3, subunit M -0.0158535
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0156014
BRWD1 bromodomain and WD repeat domain containing 1 -0.0155875
EXOC1 exocyst complex component 1 -0.0155078
FBXO33 F-box protein 33 -0.0154751
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 -0.0154294
FERMT1 fermitin family member 1 -0.0153231
CCNI cyclin I -0.0152206
ATP11B ATPase, class VI, type 11B -0.0151291
RPL9 ribosomal protein L9 -0.0150332
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0150233
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0149304
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0149069
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0148726
ARF4 ADP-ribosylation factor 4 -0.0146864
USP3 ubiquitin specific peptidase 3 -0.0146523
CLTC clathrin, heavy chain (Hc) -0.0145123
RPL15 ribosomal protein L15 -0.0144205
LCOR ligand dependent nuclear receptor corepressor -0.014371
CDK6 cyclin-dependent kinase 6 -0.0142472