Dihydroartemisinin_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dihydroartemisinin perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dihydroartemisinin_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.15071
SOD2 superoxide dismutase 2, mitochondrial 0.123729
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.11728
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0977824
EEF2 eukaryotic translation elongation factor 2 0.0890022
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0836603
UGCG UDP-glucose ceramide glucosyltransferase 0.0821718
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0720914
FN1 fibronectin 1 0.0712587
VEGFA vascular endothelial growth factor A 0.066154
LDHA lactate dehydrogenase A 0.0658584
PCBP2 poly(rC) binding protein 2 0.0648218
OGA O-GlcNAcase 0.0598673
APLP2 amyloid beta (A4) precursor-like protein 2 0.0581962
FLNA filamin A, alpha 0.0571634
MSN moesin 0.0545198
ARRDC3 arrestin domain containing 3 0.0528228
RPL3 ribosomal protein L3 0.0504793
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0460429
RPS4X ribosomal protein S4, X-linked 0.0436359
TSC22D2 TSC22 domain family, member 2 0.0415943
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0402929
GOLGA4 golgin A4 0.0399547
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0390525
DIAPH3 diaphanous-related formin 3 0.0372161
SPAG9 sperm associated antigen 9 0.0370727
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0369452
CCNL1 cyclin L1 0.0367771
MKI67 marker of proliferation Ki-67 0.0361294
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0350381
FLNB filamin B, beta 0.034464
CKAP5 cytoskeleton associated protein 5 0.0339927
UBA6 ubiquitin-like modifier activating enzyme 6 0.0337986
FNDC3B fibronectin type III domain containing 3B 0.0333767
ANLN anillin, actin binding protein 0.0333723
OPTN optineurin 0.0325285
TXNIP thioredoxin interacting protein 0.0325128
TNIP1 TNFAIP3 interacting protein 1 0.0307541
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0301542
RB1CC1 RB1-inducible coiled-coil 1 0.0299247
SFTPA2 surfactant protein A2 0.0296965
USP9X ubiquitin specific peptidase 9, X-linked 0.0290404
DSCAM Down syndrome cell adhesion molecule 0.0282918
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0280273
PHIP pleckstrin homology domain interacting protein 0.0270037
ZNF292 zinc finger protein 292 0.0267866
MYOF myoferlin 0.026204
APP amyloid beta (A4) precursor protein 0.0261333
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0260781
RBM39 RNA binding motif protein 39 0.0257905
CPNE1 copine I 0.025679
DSTN destrin (actin depolymerizing factor) 0.0253449
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0253047
HELZ helicase with zinc finger 0.0251364
TXNRD1 thioredoxin reductase 1 0.0250632
ADAR adenosine deaminase, RNA-specific 0.0249318
TPX2 TPX2, microtubule-associated 0.0248794
CSDE1 cold shock domain containing E1, RNA-binding 0.0248552
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0248219
TPM3 tropomyosin 3 0.0247388
CANX calnexin 0.0245334
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0243568
RICTOR RPTOR independent companion of MTOR, complex 2 0.0243496
CEP250 centrosomal protein 250kDa 0.0241809
SET SET nuclear proto-oncogene 0.0240573
SDC4 syndecan 4 0.0239933
TENT2 terminal nucleotidyltransferase 2 0.0239037
KIF4A kinesin family member 4A 0.023781
FXR1 fragile X mental retardation, autosomal homolog 1 0.0236278
CENPF centromere protein F, 350/400kDa 0.0235861
NONO non-POU domain containing, octamer-binding 0.0235758
YBX1 Y box binding protein 1 0.0230768
YTHDC1 YTH domain containing 1 0.0228863
MATR3 matrin 3 0.0228244
SRRM2 serine/arginine repetitive matrix 2 0.0225492
WTAP Wilms tumor 1 associated protein 0.0224598
ELL2 elongation factor, RNA polymerase II, 2 0.0224221
SERINC1 serine incorporator 1 0.0221676
RTN4 reticulon 4 0.0221007
ADAM17 ADAM metallopeptidase domain 17 0.0212664
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0210767
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0209685
TMEM123 transmembrane protein 123 0.0207435
KDM6A lysine (K)-specific demethylase 6A 0.0205518
SRP54 signal recognition particle 54kDa 0.0205225
VCL vinculin 0.0203993
SETD5 SET domain containing 5 0.0201685
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0201227
LAMP2 lysosomal-associated membrane protein 2 0.0201171
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0198068
BCLAF1 BCL2-associated transcription factor 1 0.0197866
ESYT2 extended synaptotagmin-like protein 2 0.0196932
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0195359
THOC2 THO complex 2 0.0193267
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 0.0192782
AHR aryl hydrocarbon receptor 0.0191803
PNISR PNN-interacting serine/arginine-rich protein 0.0191575
TUBB tubulin, beta class I 0.0191339
EEF1G eukaryotic translation elongation factor 1 gamma 0.0190275
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0189089

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.191601
AKAP12 A kinase (PRKA) anchor protein 12 -0.145405
IGFBP3 insulin-like growth factor binding protein 3 -0.132661
GLIS3 GLIS family zinc finger 3 -0.117871
IER3 immediate early response 3 -0.112457
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.109191
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0914329
TPT1 tumor protein, translationally-controlled 1 -0.0889715
CDH13 cadherin 13 -0.086162
FRMD4A FERM domain containing 4A -0.0832114
HLA-B major histocompatibility complex, class I, B -0.0819238
ZMYND8 zinc finger, MYND-type containing 8 -0.0799501
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0766026
HMGA2 high mobility group AT-hook 2 -0.0758195
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0751602
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0718879
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0703813
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0691948
CD44 CD44 molecule (Indian blood group) -0.0661441
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0654463
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.063299
TMSB10 thymosin beta 10 -0.0574045
RAI14 retinoic acid induced 14 -0.0562802
EGFR epidermal growth factor receptor -0.0558227
PDE10A phosphodiesterase 10A -0.0554375
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.051733
BTG1 B-cell translocation gene 1, anti-proliferative -0.051386
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0509516
ASPH aspartate beta-hydroxylase -0.0504775
COL6A3 collagen, type VI, alpha 3 -0.0480976
DIAPH2 diaphanous-related formin 2 -0.0463125
TMEM132D transmembrane protein 132D -0.0456611
LOX lysyl oxidase -0.0456136
SLC38A1 solute carrier family 38, member 1 -0.0453672
TMSB4X thymosin beta 4, X-linked -0.0438627
EFNA5 ephrin-A5 -0.0437316
AFF3 AF4/FMR2 family, member 3 -0.0433184
NAV1 neuron navigator 1 -0.043273
IFI16 interferon, gamma-inducible protein 16 -0.0430008
SFRP1 secreted frizzled-related protein 1 -0.0423286
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0386443
ENO1 enolase 1, (alpha) -0.0365829
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0365512
CLMP CXADR-like membrane protein -0.0363925
FRMPD4 FERM and PDZ domain containing 4 -0.035727
ADAM12 ADAM metallopeptidase domain 12 -0.0355227
SAMD3 sterile alpha motif domain containing 3 -0.0354117
VCAN versican -0.0348972
INHBA inhibin, beta A -0.0337282
HLA-E major histocompatibility complex, class I, E -0.0331171
ARL4C ADP-ribosylation factor-like 4C -0.0328573
EXT1 exostosin glycosyltransferase 1 -0.0317997
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0316074
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0309702
SDK1 sidekick cell adhesion molecule 1 -0.0302761
ZBTB38 zinc finger and BTB domain containing 38 -0.0302559
PNRC1 proline-rich nuclear receptor coactivator 1 -0.029613
FTL ferritin, light polypeptide -0.0292626
RRBP1 ribosome binding protein 1 -0.0291587
COL5A1 collagen, type V, alpha 1 -0.0289153
GPC6 glypican 6 -0.0288605
MT2A metallothionein 2A -0.0285298
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0283112
DST dystonin -0.0282464
MACF1 microtubule-actin crosslinking factor 1 -0.02818
MMP12 matrix metallopeptidase 12 -0.0273958
SOX5 SRY (sex determining region Y)-box 5 -0.0273526
SLC35F3 solute carrier family 35, member F3 -0.0272384
PSD3 pleckstrin and Sec7 domain containing 3 -0.0271182
NRN1 neuritin 1 -0.0270459
HLA-A major histocompatibility complex, class I, A -0.0269409
STC1 stanniocalcin 1 -0.0263422
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0257989
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0252844
PTPRK protein tyrosine phosphatase, receptor type, K -0.0252305
CTSD cathepsin D -0.0250944
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0248912
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0247581
COL6A2 collagen, type VI, alpha 2 -0.0240527
WFDC10B WAP four-disulfide core domain 10B -0.023988
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0239045
FBXL7 F-box and leucine-rich repeat protein 7 -0.0238584
ARHGAP22 Rho GTPase activating protein 22 -0.0238264
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0236355
ZBTB20 zinc finger and BTB domain containing 20 -0.0232834
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0229927
TNS3 tensin 3 -0.0227868
BNC2 basonuclin 2 -0.0225347
KRT19 keratin 19, type I -0.0223904
LSAMP limbic system-associated membrane protein -0.0221285
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0221048
SCGB1D1 secretoglobin, family 1D, member 1 -0.0220192
SMYD3 SET and MYND domain containing 3 -0.0218909
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0218883
THBS2 thrombospondin 2 -0.0217727
IFITM3 interferon induced transmembrane protein 3 -0.0216898
SQSTM1 sequestosome 1 -0.021635
PRKG1 protein kinase, cGMP-dependent, type I -0.0215308
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0214608
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0211593