Dihydroartemisinin_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dihydroartemisinin perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dihydroartemisinin_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.159449
MYH9 myosin, heavy chain 9, non-muscle 0.139549
ELL2 elongation factor, RNA polymerase II, 2 0.0950408
COL6A3 collagen, type VI, alpha 3 0.09356
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0926931
ERRFI1 ERBB receptor feedback inhibitor 1 0.0847435
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0672753
ANKRD11 ankyrin repeat domain 11 0.0642259
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0621259
CD44 CD44 molecule (Indian blood group) 0.0607924
NDRG1 N-myc downstream regulated 1 0.0604731
SHB Src homology 2 domain containing adaptor protein B 0.0563774
RTN4 reticulon 4 0.0529553
ZNF292 zinc finger protein 292 0.052933
PCBP2 poly(rC) binding protein 2 0.0516329
RPL11 ribosomal protein L11 0.0508232
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.049597
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0489649
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0473118
FLNA filamin A, alpha 0.0461268
LDHA lactate dehydrogenase A 0.0461108
ANXA2 annexin A2 0.0459335
RBM25 RNA binding motif protein 25 0.0453708
CANX calnexin 0.0446405
EPAS1 endothelial PAS domain protein 1 0.0445495
MATR3 matrin 3 0.04332
RPL3 ribosomal protein L3 0.0432416
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0420313
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0419464
GSK3B glycogen synthase kinase 3 beta 0.0419135
RAP1B RAP1B, member of RAS oncogene family 0.0405355
OGA O-GlcNAcase 0.0404293
KMT2E lysine (K)-specific methyltransferase 2E 0.0396651
TOP1 topoisomerase (DNA) I 0.0384652
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0380434
TPM4 tropomyosin 4 0.0376981
SDC4 syndecan 4 0.0371068
ARRDC3 arrestin domain containing 3 0.0367759
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0365902
GNAS GNAS complex locus 0.0364059
MT2A metallothionein 2A 0.0363702
RPL13A ribosomal protein L13a 0.0362819
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0355527
HBP1 HMG-box transcription factor 1 0.035394
ACBD3 acyl-CoA binding domain containing 3 0.034634
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0345407
TPM3 tropomyosin 3 0.0344585
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0333925
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0328816
NAP1L1 nucleosome assembly protein 1-like 1 0.0323692
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0323156
TRA2A transformer 2 alpha homolog (Drosophila) 0.0322203
ERBIN erbb2 interacting protein 0.031834
APLP2 amyloid beta (A4) precursor-like protein 2 0.0316891
GARS1 glycyl-tRNA synthetase 1 0.0316538
BHLHE40 basic helix-loop-helix family, member e40 0.0313573
EEF2 eukaryotic translation elongation factor 2 0.0309348
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0306706
MARCHF6 membrane associated ring-CH-type finger 6 0.0304263
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0303151
HIP1 huntingtin interacting protein 1 0.0302695
THRAP3 thyroid hormone receptor associated protein 3 0.0299866
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0297415
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0292845
THBS1 thrombospondin 1 0.0292164
UGCG UDP-glucose ceramide glucosyltransferase 0.0291268
CALR calreticulin 0.0290859
RYBP RING1 and YY1 binding protein 0.0288818
MAP2K1 mitogen-activated protein kinase kinase 1 0.0288795
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0286139
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0284826
ESYT2 extended synaptotagmin-like protein 2 0.0282391
AKAP9 A kinase (PRKA) anchor protein 9 0.0281994
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0281587
HOOK2 hook microtubule-tethering protein 2 0.0279708
SET SET nuclear proto-oncogene 0.0279076
EREG epiregulin 0.0278769
SBF2 SET binding factor 2 0.0277606
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0275234
PTMA prothymosin, alpha 0.0274265
OSBPL9 oxysterol binding protein-like 9 0.0274042
WTAP Wilms tumor 1 associated protein 0.0270081
LOC112694756 uncharaterized LOC112694756 0.0267718
CSDE1 cold shock domain containing E1, RNA-binding 0.0267657
JMJD1C jumonji domain containing 1C 0.0267509
QKI QKI, KH domain containing, RNA binding 0.0267104
RACK1 receptor for activated C kinase 1 0.0266208
FXR1 fragile X mental retardation, autosomal homolog 1 0.0265615
DSCAM Down syndrome cell adhesion molecule 0.0264598
FRMD6 FERM domain containing 6 0.0263956
COL4A1 collagen, type IV, alpha 1 0.0263372
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0263346
RPL37A ribosomal protein L37a 0.0262294
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0261512
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0260735
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 0.0260679
RICTOR RPTOR independent companion of MTOR, complex 2 0.0259562
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0258537
WAC WW domain containing adaptor with coiled-coil 0.0256573
KIDINS220 kinase D-interacting substrate, 220kDa 0.0255918

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.329411
TGFBI transforming growth factor, beta-induced, 68kDa -0.142399
LOX lysyl oxidase -0.107651
TMSB10 thymosin beta 10 -0.101495
CDH13 cadherin 13 -0.0971972
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0964993
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0924198
CXCL8 chemokine (C-X-C motif) ligand 8 -0.081161
POTEF POTE ankyrin domain family, member F -0.0767623
F3 coagulation factor III (thromboplastin, tissue factor) -0.0727646
PSD3 pleckstrin and Sec7 domain containing 3 -0.060815
STC1 stanniocalcin 1 -0.0593434
PDIA3 protein disulfide isomerase family A, member 3 -0.0590939
EGFR epidermal growth factor receptor -0.0544752
VEGFC vascular endothelial growth factor C -0.053527
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0526664
TMEM165 transmembrane protein 165 -0.0501739
DPYD dihydropyrimidine dehydrogenase -0.0495959
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0484441
COL1A1 collagen, type I, alpha 1 -0.0470409
P4HB prolyl 4-hydroxylase, beta polypeptide -0.046561
CALD1 caldesmon 1 -0.044129
DNAH11 dynein, axonemal, heavy chain 11 -0.0439551
IGFBP7 insulin-like growth factor binding protein 7 -0.0437947
FN1 fibronectin 1 -0.0430501
MAP1B microtubule-associated protein 1B -0.0429911
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0421926
VCL vinculin -0.0410316
GOLGA4 golgin A4 -0.0405129
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0403946
GLIS3 GLIS family zinc finger 3 -0.0400354
ZMYND8 zinc finger, MYND-type containing 8 -0.0394966
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0392335
RASAL2 RAS protein activator like 2 -0.0389926
MAP4 microtubule-associated protein 4 -0.0386047
PRKCA protein kinase C, alpha -0.038487
AHNAK AHNAK nucleoprotein -0.0377586
LPP LIM domain containing preferred translocation partner in lipoma -0.0370674
B2M beta-2-microglobulin -0.0363369
CMIP c-Maf inducing protein -0.0359508
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0354397
NBAS neuroblastoma amplified sequence -0.0346354
COL1A2 collagen, type I, alpha 2 -0.0345009
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.031776
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0314912
MBD5 methyl-CpG binding domain protein 5 -0.031442
SEPTIN7 septin 7 -0.0307595
CAV1 caveolin 1, caveolae protein, 22kDa -0.0306938
VIM vimentin -0.0306577
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0303629
COL5A1 collagen, type V, alpha 1 -0.0303276
KRIT1 KRIT1, ankyrin repeat containing -0.0300161
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0299277
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0298822
FBXL7 F-box and leucine-rich repeat protein 7 -0.0297659
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0294222
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0293897
ARHGAP24 Rho GTPase activating protein 24 -0.0289935
NRXN3 neurexin 3 -0.0288005
CALU calumenin -0.0281697
AFF3 AF4/FMR2 family, member 3 -0.0281116
HLA-C major histocompatibility complex, class I, C -0.0278877
KMT2C lysine (K)-specific methyltransferase 2C -0.0277858
S100A9 S100 calcium binding protein A9 -0.0271818
COL6A2 collagen, type VI, alpha 2 -0.0270197
PRRC1 proline-rich coiled-coil 1 -0.0269714
MKI67 marker of proliferation Ki-67 -0.0268463
TTC3 tetratricopeptide repeat domain 3 -0.0267176
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0266244
CCDC14 coiled-coil domain containing 14 -0.0259816
MGLL monoglyceride lipase -0.0259706
FNIP1 folliculin interacting protein 1 -0.0258033
SMC4 structural maintenance of chromosomes 4 -0.0257763
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0257654
COL5A2 collagen, type V, alpha 2 -0.0254443
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0253202
TBC1D5 TBC1 domain family, member 5 -0.0251855
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0249772
ATXN1 ataxin 1 -0.0249707
HMGA2 high mobility group AT-hook 2 -0.0245377
MYOF myoferlin -0.0244532
PLCB4 phospholipase C, beta 4 -0.0242657
CA12 carbonic anhydrase XII -0.0241391
USP8 ubiquitin specific peptidase 8 -0.0241316
MON2 MON2 homolog (S. cerevisiae) -0.0241073
APOLD1 apolipoprotein L domain containing 1 -0.024066
SP3 Sp3 transcription factor -0.023951
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0238337
BCAR1 breast cancer anti-estrogen resistance 1 -0.0238206
LOXL2 lysyl oxidase-like 2 -0.0234903
CDK13 cyclin-dependent kinase 13 -0.0233739
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0233338
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0231619
CAST calpastatin -0.0231216
TENT5A terminal nucleotidyltransferase 5A -0.0228672
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0228504
SDK1 sidekick cell adhesion molecule 1 -0.0227193
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0226715
TENM3 teneurin transmembrane protein 3 -0.0226278
PFN1 profilin 1 -0.0225062