Dimethyl fumarate_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.245134
TRIO trio Rho guanine nucleotide exchange factor 0.101929
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0979604
NAV1 neuron navigator 1 0.0911838
PODXL podocalyxin-like 0.0801754
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0769487
CD44 CD44 molecule (Indian blood group) 0.0695442
COL8A1 collagen, type VIII, alpha 1 0.0612605
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0606408
PLAT plasminogen activator, tissue 0.0603084
FBN1 fibrillin 1 0.0594612
COL1A2 collagen, type I, alpha 2 0.058854
FNDC3B fibronectin type III domain containing 3B 0.0536494
FLNB filamin B, beta 0.0516462
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0501554
RUNX1 runt-related transcription factor 1 0.0487981
SEPTIN9 septin 9 0.043065
C1D C1D nuclear receptor corepressor 0.042744
ATP13A3 ATPase type 13A3 0.0418312
AUTS2 autism susceptibility candidate 2 0.0418045
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0403302
APP amyloid beta (A4) precursor protein 0.0399849
PSD3 pleckstrin and Sec7 domain containing 3 0.039525
NFE2L1 nuclear factor, erythroid 2-like 1 0.038132
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0378141
NCOR2 nuclear receptor corepressor 2 0.0367206
MSN moesin 0.0364205
TNIP1 TNFAIP3 interacting protein 1 0.0344416
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0334964
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0330225
FTH1 ferritin, heavy polypeptide 1 0.0327274
MYH9 myosin, heavy chain 9, non-muscle 0.0311036
GPC6 glypican 6 0.0308526
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0305163
L1CAM L1 cell adhesion molecule 0.0295091
COL5A2 collagen, type V, alpha 2 0.0294663
GLIS3 GLIS family zinc finger 3 0.0294517
SP3 Sp3 transcription factor 0.0294365
ZMIZ1 zinc finger, MIZ-type containing 1 0.0292011
FLNA filamin A, alpha 0.0286305
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0286262
SLC22A23 solute carrier family 22, member 23 0.0285046
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0276685
TIMP2 TIMP metallopeptidase inhibitor 2 0.0271773
RTN4 reticulon 4 0.0271753
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0267326
LENG8 leukocyte receptor cluster (LRC) member 8 0.0266327
ZNF292 zinc finger protein 292 0.0261192
ACTN4 actinin, alpha 4 0.0261182
COL5A1 collagen, type V, alpha 1 0.0260537
NOTCH2 notch 2 0.0259884
DPYSL3 dihydropyrimidinase-like 3 0.0259697
MT2A metallothionein 2A 0.0256137
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0246437
ADAM9 ADAM metallopeptidase domain 9 0.0241169
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0239351
PLD3 phospholipase D family, member 3 0.0238054
MYADM myeloid-associated differentiation marker 0.0231003
SRRM2 serine/arginine repetitive matrix 2 0.0225755
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0222767
SBF2 SET binding factor 2 0.0219815
SETD5 SET domain containing 5 0.0218884
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0218359
CLIP2 CAP-GLY domain containing linker protein 2 0.0218261
LAMA5 laminin, alpha 5 0.021728
SOX9 SRY (sex determining region Y)-box 9 0.0215818
COL6A1 collagen, type VI, alpha 1 0.021459
TPM3 tropomyosin 3 0.0214559
RNF145 ring finger protein 145 0.0213643
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.0213027
ELL2 elongation factor, RNA polymerase II, 2 0.0212597
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0210785
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0208856
AFDN afadin, adherens junction formation factor 0.0208736
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0207575
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0204855
ADAM17 ADAM metallopeptidase domain 17 0.0202835
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.020219
COL6A2 collagen, type VI, alpha 2 0.0201558
ZBTB20 zinc finger and BTB domain containing 20 0.0200313
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0192645
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0191366
ADAR adenosine deaminase, RNA-specific 0.0190239
LPP LIM domain containing preferred translocation partner in lipoma 0.0190183
KDM6A lysine (K)-specific demethylase 6A 0.0189061
AGRN agrin 0.0186089
PRELID2 PRELI domain containing 2 0.0185058
SSBP2 single-stranded DNA binding protein 2 0.0184174
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 0.0182478
WTAP Wilms tumor 1 associated protein 0.0182427
SHB Src homology 2 domain containing adaptor protein B 0.0181639
LOX lysyl oxidase 0.0178494
VEGFC vascular endothelial growth factor C 0.017731
UBA6 ubiquitin-like modifier activating enzyme 6 0.0176393
ANKRD36 ankyrin repeat domain 36 0.0176183
TENT5A terminal nucleotidyltransferase 5A 0.0175514
ADAM19 ADAM metallopeptidase domain 19 0.0173834
MB21D2 Mab-21 domain containing 2 0.0173323
MCL1 myeloid cell leukemia 1 0.0172533
STC1 stanniocalcin 1 0.0172466

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.40935
VIM vimentin -0.257688
TMSB10 thymosin beta 10 -0.2398
AHNAK AHNAK nucleoprotein -0.130725
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.107693
S100A10 S100 calcium binding protein A10 -0.0965727
PTMA prothymosin, alpha -0.0916214
LMNA lamin A/C -0.0760436
IGFBP3 insulin-like growth factor binding protein 3 -0.0752814
S100A6 S100 calcium binding protein A6 -0.0718509
AKAP12 A kinase (PRKA) anchor protein 12 -0.0709163
CANX calnexin -0.0691443
CSTB cystatin B (stefin B) -0.0659652
TPM4 tropomyosin 4 -0.0631388
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0629011
CALR calreticulin -0.0558043
CCND1 cyclin D1 -0.0556058
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0531978
CDH13 cadherin 13 -0.0498927
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0493618
FN1 fibronectin 1 -0.0489025
TMSB4X thymosin beta 4, X-linked -0.0437972
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0437003
FTL ferritin, light polypeptide -0.0426578
SQSTM1 sequestosome 1 -0.0409624
TPT1 tumor protein, translationally-controlled 1 -0.0403956
SAMD9 sterile alpha motif domain containing 9 -0.0394903
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0392933
SLC38A1 solute carrier family 38, member 1 -0.0376975
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0376636
RPS24 ribosomal protein S24 -0.0359912
ABI3BP ABI family, member 3 (NESH) binding protein -0.0356496
RRBP1 ribosome binding protein 1 -0.0343944
RIGI RNA sensor RIG-I -0.0340834
ANXA2 annexin A2 -0.0325631
RPL35A ribosomal protein L35a -0.0323964
RHOBTB3 Rho-related BTB domain containing 3 -0.0313925
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0313797
CAVIN1 caveolae associated protein 1 -0.0306773
RPLP1 ribosomal protein, large, P1 -0.0303038
IARS1 isoleucyl-tRNA synthetase 1 -0.0297931
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0296901
RPL34 ribosomal protein L34 -0.0290755
RND3 Rho family GTPase 3 -0.0285252
SP100 SP100 nuclear antigen -0.0278778
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.027271
RSAD2 radical S-adenosyl methionine domain containing 2 -0.027189
RAB1A RAB1A, member RAS oncogene family -0.0269799
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0267731
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0267052
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0265561
AFF4 AF4/FMR2 family, member 4 -0.0265311
HLA-E major histocompatibility complex, class I, E -0.0259409
EIF1 eukaryotic translation initiation factor 1 -0.0256997
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0254488
BTG1 B-cell translocation gene 1, anti-proliferative -0.0254102
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0249408
AHNAK2 AHNAK nucleoprotein 2 -0.0248852
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0247508
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0244666
GOLGB1 golgin B1 -0.0237943
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0237857
LRRC17 leucine rich repeat containing 17 -0.0237095
ARF1 ADP-ribosylation factor 1 -0.0232843
RPS5 ribosomal protein S5 -0.0230322
INSIG1 insulin induced gene 1 -0.0229047
IFIH1 interferon induced with helicase C domain 1 -0.0228005
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0227167
SORBS2 sorbin and SH3 domain containing 2 -0.0226913
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0226508
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0225054
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0222737
KDM3A lysine (K)-specific demethylase 3A -0.0220397
GARS1 glycyl-tRNA synthetase 1 -0.0219156
RPS8 ribosomal protein S8 -0.0218535
TAOK1 TAO kinase 1 -0.0218083
IFI16 interferon, gamma-inducible protein 16 -0.0213817
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0210704
GADD45A growth arrest and DNA-damage-inducible, alpha -0.0209017
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0208512
RPL19 ribosomal protein L19 -0.0208134
RACK1 receptor for activated C kinase 1 -0.0206203
HSPB1 heat shock 27kDa protein 1 -0.0203615
ALCAM activated leukocyte cell adhesion molecule -0.0203469
HDLBP high density lipoprotein binding protein -0.0199273
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0197506
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0196996
CEP350 centrosomal protein 350kDa -0.0196131
STAU1 staufen double-stranded RNA binding protein 1 -0.0195101
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 -0.0194858
IL7R interleukin 7 receptor -0.0194846
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0193538
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0191465
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0191272
FLT1 fms-related tyrosine kinase 1 -0.019037
MAP1B microtubule-associated protein 1B -0.0189751
SEC61G Sec61 gamma subunit -0.018683
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0186483
S100A11 S100 calcium binding protein A11 -0.0186401
S100A4 S100 calcium binding protein A4 -0.0186255