Dimethyl fumarate_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VMP1 vacuole membrane protein 1 0.10589
ACTG1 actin gamma 1 0.0978275
LASP1 LIM and SH3 protein 1 0.0893801
MYH9 myosin, heavy chain 9, non-muscle 0.0850802
LPP LIM domain containing preferred translocation partner in lipoma 0.0809519
CLTC clathrin, heavy chain (Hc) 0.0759826
ZMYND8 zinc finger, MYND-type containing 8 0.075332
SMYD3 SET and MYND domain containing 3 0.0731992
ASPH aspartate beta-hydroxylase 0.0722533
KMT2C lysine (K)-specific methyltransferase 2C 0.0693961
MCL1 myeloid cell leukemia 1 0.0683254
KRT8 keratin 8, type II 0.0641663
ERBB2 erb-b2 receptor tyrosine kinase 2 0.0596317
FBXL20 F-box and leucine-rich repeat protein 20 0.0593218
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0572613
CEP250 centrosomal protein 250kDa 0.0563551
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0560895
SRCIN1 SRC kinase signaling inhibitor 1 0.0559021
PTK2 protein tyrosine kinase 2 0.05572
YAP1 Yes-associated protein 1 0.0551895
PIP4K2B phosphatidylinositol-5-phosphate 4-kinase, type II, beta 0.0548671
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0540142
IGFBP5 insulin-like growth factor binding protein 5 0.0530159
DTNA dystrobrevin, alpha 0.0519162
SBF2 SET binding factor 2 0.0498221
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.049393
BZW1 basic leucine zipper and W2 domains 1 0.048902
PTPRK protein tyrosine phosphatase, receptor type, K 0.048698
RPL19 ribosomal protein L19 0.0481042
DSPP dentin sialophosphoprotein 0.0478691
RIMS2 regulating synaptic membrane exocytosis 2 0.047554
PATJ PATJ crumbs cell polarity complex component 0.0471886
ENO1 enolase 1, (alpha) 0.0462665
RAD51B RAD51 paralog B 0.0461959
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.0447977
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0445456
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0445402
TRIO trio Rho guanine nucleotide exchange factor 0.0444864
PRRC2B proline-rich coiled-coil 2B 0.0440557
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0427584
PRELID2 PRELI domain containing 2 0.0406812
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.039742
PDLIM5 PDZ and LIM domain 5 0.0392534
APP amyloid beta (A4) precursor protein 0.0385473
LDHA lactate dehydrogenase A 0.0382673
LIMCH1 LIM and calponin homology domains 1 0.038205
SP100 SP100 nuclear antigen 0.0377938
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.0375793
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0373132
KDM2A lysine (K)-specific demethylase 2A 0.0372558
TMCC1 transmembrane and coiled-coil domain family 1 0.0372392
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.036916
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0368
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0365441
NCOA6 nuclear receptor coactivator 6 0.0362381
FAM168A family with sequence similarity 168, member A 0.036161
POTEF POTE ankyrin domain family, member F 0.0361595
ZFAND3 zinc finger, AN1-type domain 3 0.0360011
LOC112694756 uncharaterized LOC112694756 0.0358024
DST dystonin 0.0357286
ITCH itchy E3 ubiquitin protein ligase 0.0356491
PARD3 par-3 family cell polarity regulator 0.0352487
DNAH14 dynein, axonemal, heavy chain 14 0.0352337
TNIK TRAF2 and NCK interacting kinase 0.034531
MIPOL1 mirror-image polydactyly 1 0.0340641
MMP24OS MMP24 opposite strand 0.0338937
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0338607
NDRG1 N-myc downstream regulated 1 0.0337766
TBL1X transducin (beta)-like 1X-linked 0.0334485
SHROOM3 shroom family member 3 0.033145
GOLGB1 golgin B1 0.0329713
ANKRD36C ankyrin repeat domain 36C 0.0329068
ZC3H11A zinc finger CCCH-type containing 11A 0.0328426
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0326986
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0323689
NF1 neurofibromin 1 0.0312903
RAB22A RAB22A, member RAS oncogene family 0.0308198
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0306228
TMSB4X thymosin beta 4, X-linked 0.0305419
ATXN1 ataxin 1 0.0303668
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0303038
APLP2 amyloid beta (A4) precursor-like protein 2 0.0300623
ATAD2 ATPase family, AAA domain containing 2 0.0297466
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0295144
SRRM2 serine/arginine repetitive matrix 2 0.0295137
AKAP13 A kinase (PRKA) anchor protein 13 0.0291895
ZNFX1 zinc finger, NFX1-type containing 1 0.0288304
CYFIP1 cytoplasmic FMR1 interacting protein 1 0.0288259
SEPTIN11 septin 11 0.0288255
CDK12 cyclin-dependent kinase 12 0.0286697
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0286587
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0285239
SAMD4A sterile alpha motif domain containing 4A 0.0283316
ZNF652 zinc finger protein 652 0.0281819
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0279648
ZBTB20 zinc finger and BTB domain containing 20 0.027888
FAM219A family with sequence similarity 219, member A 0.0278007
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 0.0277795
SETD5 SET domain containing 5 0.0276896
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0276074

decreased expression

Symbol Name Standardized Value
RPL23 ribosomal protein L23 -0.114334
MT2A metallothionein 2A -0.104896
S100A8 S100 calcium binding protein A8 -0.0646029
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0606293
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 -0.0519585
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 -0.0482922
S100A9 S100 calcium binding protein A9 -0.0457994
SLC38A1 solute carrier family 38, member 1 -0.0450432
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0449544
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.0413235
S100A14 S100 calcium binding protein A14 -0.0382183
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0365067
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0354041
GRB7 growth factor receptor-bound protein 7 -0.0321332
NTN4 netrin 4 -0.0309555
S100P S100 calcium binding protein P -0.0292164
RPLP1 ribosomal protein, large, P1 -0.0286097
GRHL1 grainyhead-like 1 (Drosophila) -0.0280242
S100A7 S100 calcium binding protein A7 -0.0272603
FGB fibrinogen beta chain -0.0263835
RPS27 ribosomal protein S27 -0.0262266
MIEN1 migration and invasion enhancer 1 -0.0259511
RPS29 ribosomal protein S29 -0.0256272
TPT1 tumor protein, translationally-controlled 1 -0.0232472
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0232423
S100A11 S100 calcium binding protein A11 -0.0232311
MUCL1 mucin-like 1 -0.0231113
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0217555
RPS12 ribosomal protein S12 -0.0203675
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0199075
NT5C2 5'-nucleotidase, cytosolic II -0.0197902
USP3 ubiquitin specific peptidase 3 -0.0197448
CFB complement factor B -0.0194395
IER3 immediate early response 3 -0.018887
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0180575
CD44 CD44 molecule (Indian blood group) -0.0179693
CD63 CD63 molecule -0.01784
YPEL2 yippee-like 2 (Drosophila) -0.0176706
CXCL8 chemokine (C-X-C motif) ligand 8 -0.017615
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0176009
RPL36 ribosomal protein L36 -0.0170659
RPS27A ribosomal protein S27a -0.0168621
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0167868
SMIM14 small integral membrane protein 14 -0.0167708
AREG amphiregulin -0.0167157
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) -0.0166924
PDIA3 protein disulfide isomerase family A, member 3 -0.0166478
HLA-C major histocompatibility complex, class I, C -0.0164915
WSB1 WD repeat and SOCS box containing 1 -0.0164312
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0162304
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 -0.0162021
BHLHE40 basic helix-loop-helix family, member e40 -0.01614
LCN2 lipocalin 2 -0.0159504
RPS25 ribosomal protein S25 -0.0159052
TBCA tubulin folding cofactor A -0.0158778
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0158085
RPS3 ribosomal protein S3 -0.0157113
RPS6 ribosomal protein S6 -0.0156863
TMED2 transmembrane emp24 domain trafficking protein 2 -0.0154229
SPTSSB serine palmitoyltransferase, small subunit B -0.0154166
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0151914
S100A10 S100 calcium binding protein A10 -0.0151686
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0150981
RRBP1 ribosome binding protein 1 -0.0150178
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0148581
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0147597
RPS24 ribosomal protein S24 -0.0145323
STS steroid sulfatase (microsomal), isozyme S -0.0144975
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0144376
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0143307
MARCKS myristoylated alanine-rich protein kinase C substrate -0.014223
SEC61G Sec61 gamma subunit -0.0142219
PNISR PNN-interacting serine/arginine-rich protein -0.0141518
RPS23 ribosomal protein S23 -0.0140874
SERF2 small EDRK-rich factor 2 -0.0140588
IFNGR1 interferon gamma receptor 1 -0.0140317
NCOA7 nuclear receptor coactivator 7 -0.0138758
THSD4 thrombospondin, type I, domain containing 4 -0.0138259
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0138009
TMC5 transmembrane channel-like 5 -0.0137662
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 -0.0136088
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0134957
NDUFA4 NDUFA4, mitochondrial complex associated -0.0134583
HMGB1 high mobility group box 1 -0.013418
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0132973
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0131652
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0131302
B2M beta-2-microglobulin -0.0130474
CCND1 cyclin D1 -0.0130189
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) -0.0130178
RPL28 ribosomal protein L28 -0.0129038
DCAF5 DDB1 and CUL4 associated factor 5 -0.0128975
FBXO11 F-box protein 11 -0.0128794
IFI6 interferon, alpha-inducible protein 6 -0.0127867
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0127742
COX4I1 cytochrome c oxidase subunit IV isoform 1 -0.0127727
GNAS GNAS complex locus -0.0126117
RPS13 ribosomal protein S13 -0.0123436
LMAN1 lectin, mannose-binding, 1 -0.0123155
ANKRD30A ankyrin repeat domain 30A -0.0121559