Dimethyl fumarate_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TENM3 teneurin transmembrane protein 3 0.147932
ERBB4 erb-b2 receptor tyrosine kinase 4 0.128147
TOX thymocyte selection-associated high mobility group box 0.12537
RAD51B RAD51 paralog B 0.123294
SLIT2 slit homolog 2 (Drosophila) 0.112281
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.110415
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.108688
ZNF608 zinc finger protein 608 0.101542
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0838858
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0814357
ARB2A ARB2 cotranscriptional regulator A 0.0796658
EFNA5 ephrin-A5 0.0759851
TTC28 tetratricopeptide repeat domain 28 0.0709586
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0698349
NEBL nebulette 0.0694779
ACTG1 actin gamma 1 0.0662907
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.0647154
EEF2 eukaryotic translation elongation factor 2 0.0610718
EGR1 early growth response 1 0.0609998
LOC112694756 uncharaterized LOC112694756 0.0585026
SMYD3 SET and MYND domain containing 3 0.0578288
AUTS2 autism susceptibility candidate 2 0.0578184
VCL vinculin 0.0556882
PRRC2A proline-rich coiled-coil 2A 0.0525998
ADGRG6 adhesion G protein-coupled receptor G6 0.051492
GRID2 glutamate receptor, ionotropic, delta 2 0.0506323
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0493964
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.048906
DST dystonin 0.0456401
RPL3 ribosomal protein L3 0.04533
RPL11 ribosomal protein L11 0.044473
SRRM2 serine/arginine repetitive matrix 2 0.0442099
VMP1 vacuole membrane protein 1 0.0434718
MCL1 myeloid cell leukemia 1 0.0429308
RAP1B RAP1B, member of RAS oncogene family 0.0429141
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0428687
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0425486
FOXO3 forkhead box O3 0.0425286
HILPDA hypoxia inducible lipid droplet-associated 0.0419777
HSPA8 heat shock 70kDa protein 8 0.0416444
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.0414882
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0412096
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0411134
CDH18 cadherin 18, type 2 0.0404313
PDE4D phosphodiesterase 4D, cAMP-specific 0.0400662
RPS4X ribosomal protein S4, X-linked 0.0398592
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0398266
TBC1D32 TBC1 domain family, member 32 0.0382629
MLIP muscular LMNA-interacting protein 0.0381835
EXOC6B exocyst complex component 6B 0.0377788
EIF4A1 eukaryotic translation initiation factor 4A1 0.0373934
LENG8 leukocyte receptor cluster (LRC) member 8 0.0368493
VEGFC vascular endothelial growth factor C 0.0366718
HHIP hedgehog interacting protein 0.0363857
MIMS1 mitochondrial inner membrane scaffold 1 0.035892
KMT2D lysine (K)-specific methyltransferase 2D 0.035619
SOX5 SRY (sex determining region Y)-box 5 0.0353627
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0348017
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0346064
CABIN1 calcineurin binding protein 1 0.0345694
FMNL2 formin-like 2 0.0342551
ATRN attractin 0.0340677
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0339267
TAS2R14 taste receptor, type 2, member 14 0.0336425
DIDO1 death inducer-obliterator 1 0.0333966
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0333838
ZFP36L1 ZFP36 ring finger protein-like 1 0.0320878
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 0.0314911
ZNFX1 zinc finger, NFX1-type containing 1 0.0313715
EEF1G eukaryotic translation elongation factor 1 gamma 0.031129
RPL13A ribosomal protein L13a 0.0309609
VIM vimentin 0.0307581
WLS wntless Wnt ligand secretion mediator 0.0306605
TMEM259 transmembrane protein 259 0.0304129
LDHA lactate dehydrogenase A 0.0302706
EIF4B eukaryotic translation initiation factor 4B 0.0302447
MYL12B myosin, light chain 12B, regulatory 0.0300845
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0299865
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0297088
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0296248
APLP2 amyloid beta (A4) precursor-like protein 2 0.0292158
ZCCHC7 zinc finger, CCHC domain containing 7 0.0291068
MAGEA4 melanoma antigen family A4 0.0289088
SYAP1 synapse associated protein 1 0.0288181
PGAP1 post-GPI attachment to proteins 1 0.0285998
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0283627
CAMKMT calmodulin-lysine N-methyltransferase 0.0283435
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0283392
SET SET nuclear proto-oncogene 0.0282606
SRF serum response factor (c-fos serum response element-binding transcription factor) 0.0279768
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0279075
NPAS3 neuronal PAS domain protein 3 0.0275773
FLNA filamin A, alpha 0.0275474
ALMS1 Alstrom syndrome protein 1 0.0272316
DENND1A DENN/MADD domain containing 1A 0.0270444
RPLP0 ribosomal protein, large, P0 0.0268919
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0268159
SLF1 SMC5-SMC6 complex localization factor 1 0.0264208
LDLRAD3 low density lipoprotein receptor class A domain containing 3 0.0262134
PTCH1 patched 1 0.02584

decreased expression

Symbol Name Standardized Value
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0827078
NCOR1 nuclear receptor corepressor 1 -0.0656305
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0637209
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0577869
KMT2E lysine (K)-specific methyltransferase 2E -0.0577468
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0568452
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0563931
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0498568
MKI67 marker of proliferation Ki-67 -0.0465902
PTMA prothymosin, alpha -0.0456268
MATR3 matrin 3 -0.0440417
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0439656
XPO1 exportin 1 -0.0419065
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0406213
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0399476
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.038692
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0383956
CELF2 CUGBP, Elav-like family member 2 -0.0379591
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0378626
SETD5 SET domain containing 5 -0.0378558
NT5C2 5'-nucleotidase, cytosolic II -0.0370349
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0361704
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0354736
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0351842
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0351137
NAMPT nicotinamide phosphoribosyltransferase -0.035105
TRIO trio Rho guanine nucleotide exchange factor -0.0344362
FBXO11 F-box protein 11 -0.0321813
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0321036
ACACA acetyl-CoA carboxylase alpha -0.031807
CADM2 cell adhesion molecule 2 -0.0318062
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0316991
FNBP1L formin binding protein 1-like -0.0316097
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0313983
NIPBL Nipped-B homolog (Drosophila) -0.0313167
RPL7 ribosomal protein L7 -0.0310625
SPAG9 sperm associated antigen 9 -0.0308618
PNISR PNN-interacting serine/arginine-rich protein -0.0302712
TOP2B topoisomerase (DNA) II beta 180kDa -0.0298224
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0298101
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0293924
ZMYND8 zinc finger, MYND-type containing 8 -0.0291823
RAB10 RAB10, member RAS oncogene family -0.029026
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0288301
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0287471
RAB6A RAB6A, member RAS oncogene family -0.0282119
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0280379
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0279847
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.027965
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0276261
RPS3 ribosomal protein S3 -0.0274498
SRPK2 SRSF protein kinase 2 -0.0274118
ZNF292 zinc finger protein 292 -0.0272307
SEPTIN7 septin 7 -0.0270781
GLG1 golgi glycoprotein 1 -0.0266822
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0257883
RNF145 ring finger protein 145 -0.0257722
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 -0.0255325
INTS10 integrator complex subunit 10 -0.0250294
BRWD1 bromodomain and WD repeat domain containing 1 -0.024936
KMT2A lysine (K)-specific methyltransferase 2A -0.0245241
RPL38 ribosomal protein L38 -0.0244685
WASF2 WAS protein family, member 2 -0.0244225
SEC63 SEC63 homolog (S. cerevisiae) -0.024394
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0243341
KDM3A lysine (K)-specific demethylase 3A -0.02433
CANX calnexin -0.02417
NOP58 NOP58 ribonucleoprotein -0.0239101
DGKH diacylglycerol kinase, eta -0.0238748
RPL31 ribosomal protein L31 -0.0237475
NUP58 nucleoporin 58 -0.0237268
RPS12 ribosomal protein S12 -0.0237146
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0236493
SNX3 sorting nexin 3 -0.0236094
RTN3 reticulon 3 -0.023586
RNF115 ring finger protein 115 -0.0233988
ATAD2 ATPase family, AAA domain containing 2 -0.0233737
NASP nuclear autoantigenic sperm protein (histone-binding) -0.0233021
SSR1 signal sequence receptor, alpha -0.0232367
INSIG2 insulin induced gene 2 -0.0231371
PAPOLA poly(A) polymerase alpha -0.0222827
MAP4 microtubule-associated protein 4 -0.0222817
RPLP1 ribosomal protein, large, P1 -0.0221765
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0219784
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0219771
PDIA3 protein disulfide isomerase family A, member 3 -0.0219764
SOX4 SRY (sex determining region Y)-box 4 -0.0217457
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0216857
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0215794
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0214873
PDS5B PDS5 cohesin associated factor B -0.0211065
U2SURP U2 snRNP-associated SURP domain containing -0.0210883
QKI QKI, KH domain containing, RNA binding -0.0210435
RPS29 ribosomal protein S29 -0.0210203
FAM162A family with sequence similarity 162, member A -0.0209955
MACF1 microtubule-actin crosslinking factor 1 -0.0209316
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0209254
CDC27 cell division cycle 27 -0.0204775
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0202939
CERT1 ceramide transporter 1 -0.020271