Dimethyl fumarate_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 0.158059
MYH9 myosin, heavy chain 9, non-muscle 0.110472
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.100542
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0952185
PRELID2 PRELI domain containing 2 0.0918573
RAD51B RAD51 paralog B 0.0893508
DSCAM Down syndrome cell adhesion molecule 0.0879408
ZNF292 zinc finger protein 292 0.0677663
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0670438
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0652385
KRT8 keratin 8, type II 0.0638961
MCL1 myeloid cell leukemia 1 0.0620556
TBC1D22A TBC1 domain family, member 22A 0.0574126
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0564919
MED13L mediator complex subunit 13-like 0.0533987
TXNRD1 thioredoxin reductase 1 0.052116
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0514354
KMT2C lysine (K)-specific methyltransferase 2C 0.0511238
KDM4C lysine (K)-specific demethylase 4C 0.050452
MBD5 methyl-CpG binding domain protein 5 0.0476731
ENO1 enolase 1, (alpha) 0.0472263
RPL3 ribosomal protein L3 0.0466058
TENM3 teneurin transmembrane protein 3 0.0456966
PTK2 protein tyrosine kinase 2 0.0454529
FHIT fragile histidine triad 0.0454069
PTBP3 polypyrimidine tract binding protein 3 0.0452569
ANKRD11 ankyrin repeat domain 11 0.0452313
AHNAK AHNAK nucleoprotein 0.0447333
LPP LIM domain containing preferred translocation partner in lipoma 0.0420896
HELZ helicase with zinc finger 0.0412289
SHROOM3 shroom family member 3 0.041161
ANKRD12 ankyrin repeat domain 12 0.0410077
SMYD3 SET and MYND domain containing 3 0.040704
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0404624
ZNF638 zinc finger protein 638 0.0393534
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0384837
BBX bobby sox homolog (Drosophila) 0.0383286
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0380361
NF1 neurofibromin 1 0.0378384
FLNB filamin B, beta 0.0376773
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0374727
WAC WW domain containing adaptor with coiled-coil 0.0374539
YEATS2 YEATS domain containing 2 0.0374475
APLP2 amyloid beta (A4) precursor-like protein 2 0.0357098
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0352725
SETD5 SET domain containing 5 0.0349276
DSPP dentin sialophosphoprotein 0.0348643
ASPH aspartate beta-hydroxylase 0.0339501
KIAA1217 KIAA1217 0.0338403
PATJ PATJ crumbs cell polarity complex component 0.0335456
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0330833
TBC1D5 TBC1 domain family, member 5 0.0330705
MACF1 microtubule-actin crosslinking factor 1 0.0326348
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0325182
PGK1 phosphoglycerate kinase 1 0.032337
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0319404
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0318402
DLG1 discs, large homolog 1 (Drosophila) 0.0316917
APP amyloid beta (A4) precursor protein 0.031664
SFPQ splicing factor proline/glutamine-rich 0.031653
KDM6A lysine (K)-specific demethylase 6A 0.0315261
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0315092
PLEC plectin 0.0314977
VMP1 vacuole membrane protein 1 0.0314829
EIF4B eukaryotic translation initiation factor 4B 0.0314138
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0313519
BCLAF1 BCL2-associated transcription factor 1 0.0312515
YAP1 Yes-associated protein 1 0.0311071
EZR ezrin 0.0310135
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0305626
CDK19 cyclin-dependent kinase 19 0.0304597
CTNND1 catenin (cadherin-associated protein), delta 1 0.0301667
JMJD1C jumonji domain containing 1C 0.0297815
SBF2 SET binding factor 2 0.0295932
ERRFI1 ERBB receptor feedback inhibitor 1 0.0295669
SMAD3 SMAD family member 3 0.0294654
PCM1 pericentriolar material 1 0.0292147
SDC4 syndecan 4 0.0291224
TRA2B transformer 2 beta homolog (Drosophila) 0.028888
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0288281
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0286094
MYO1D myosin ID 0.0283444
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0283306
UBA6 ubiquitin-like modifier activating enzyme 6 0.0283206
EXOC4 exocyst complex component 4 0.02817
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0281405
RNF213 ring finger protein 213 0.0281177
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0280304
SEPTIN9 septin 9 0.0279969
SLC38A2 solute carrier family 38, member 2 0.02784
MYOF myoferlin 0.0277949
MKI67 marker of proliferation Ki-67 0.0273722
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0271622
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0268099
EXOC6B exocyst complex component 6B 0.0267839
PCBP2 poly(rC) binding protein 2 0.0267644
SEC31A SEC31 homolog A (S. cerevisiae) 0.0265726
PUM1 pumilio RNA-binding family member 1 0.0264844
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0264259
FLNA filamin A, alpha 0.0263133

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.221112
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.150343
FTL ferritin, light polypeptide -0.0890365
TPT1 tumor protein, translationally-controlled 1 -0.0801204
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0792505
TMSB10 thymosin beta 10 -0.0735933
RPL35A ribosomal protein L35a -0.0718419
PTMA prothymosin, alpha -0.0686154
RPLP1 ribosomal protein, large, P1 -0.0638295
EIF1 eukaryotic translation initiation factor 1 -0.0634302
RPS8 ribosomal protein S8 -0.0605246
RPL34 ribosomal protein L34 -0.0598015
RPS6 ribosomal protein S6 -0.0460634
RPS24 ribosomal protein S24 -0.0445161
RACK1 receptor for activated C kinase 1 -0.0425698
RPL31 ribosomal protein L31 -0.040717
S100A10 S100 calcium binding protein A10 -0.0395454
RPS19 ribosomal protein S19 -0.0386877
LMAN1 lectin, mannose-binding, 1 -0.0380744
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.037916
CANX calnexin -0.0361391
RPS27A ribosomal protein S27a -0.035423
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0352599
RPS3 ribosomal protein S3 -0.0348545
RPS13 ribosomal protein S13 -0.0343313
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0332509
RPS5 ribosomal protein S5 -0.0328381
RPL19 ribosomal protein L19 -0.0328167
RPLP2 ribosomal protein, large, P2 -0.0300927
RPS25 ribosomal protein S25 -0.029823
RPLP0 ribosomal protein, large, P0 -0.0298169
RPL12 ribosomal protein L12 -0.0296351
INTS6 integrator complex subunit 6 -0.029297
RPS27 ribosomal protein S27 -0.0290818
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0287714
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0287579
RPL18 ribosomal protein L18 -0.028602
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0279311
SPDYA speedy/RINGO cell cycle regulator family member A -0.0273387
RPS23 ribosomal protein S23 -0.0266011
RPL38 ribosomal protein L38 -0.0264638
RPS29 ribosomal protein S29 -0.0263005
KPNB1 karyopherin (importin) beta 1 -0.0262257
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0260366
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0259
ARF1 ADP-ribosylation factor 1 -0.02575
RPL26 ribosomal protein L26 -0.025549
LRRC23 leucine rich repeat containing 23 -0.0254933
RPS16 ribosomal protein S16 -0.0254523
RPL32 ribosomal protein L32 -0.025023
RPS10 ribosomal protein S10 -0.0246932
RPL7 ribosomal protein L7 -0.0244922
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0243626
SRP72 signal recognition particle 72kDa -0.0229827
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0228556
MORF4L2 mortality factor 4 like 2 -0.0226142
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0225567
CCNI cyclin I -0.0225005
MTDH metadherin -0.022341
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.022292
RPL8 ribosomal protein L8 -0.0222698
ATF4 activating transcription factor 4 -0.0219601
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0218405
RPS15 ribosomal protein S15 -0.0218256
RPL23 ribosomal protein L23 -0.0217233
CCDC47 coiled-coil domain containing 47 -0.0213718
KDM3A lysine (K)-specific demethylase 3A -0.0212093
CALR calreticulin -0.0211818
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.021124
RPL36 ribosomal protein L36 -0.0206764
RPS14 ribosomal protein S14 -0.0205644
RPS11 ribosomal protein S11 -0.020412
S100A9 S100 calcium binding protein A9 -0.0203584
RSL1D1 ribosomal L1 domain containing 1 -0.0199888
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.0197861
RPL27A ribosomal protein L27a -0.0196797
ZNF511 zinc finger protein 511 -0.0196225
RPS20 ribosomal protein S20 -0.0196116
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0195407
EPCAM epithelial cell adhesion molecule -0.0195341
RPL30 ribosomal protein L30 -0.0192414
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0190195
SEC61G Sec61 gamma subunit -0.018966
YBX1 Y box binding protein 1 -0.0189305
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0187291
VDAC1 voltage-dependent anion channel 1 -0.0185284
RPL5 ribosomal protein L5 -0.0182292
TKT transketolase -0.0181854
ERO1B endoplasmic reticulum oxidoreductase 1 beta -0.0178889
RPS12 ribosomal protein S12 -0.0176048
GNAS GNAS complex locus -0.0175035
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0171238
RRBP1 ribosome binding protein 1 -0.0170172
NAP1L1 nucleosome assembly protein 1-like 1 -0.0169942
RPS17 ribosomal protein S17 -0.0169874
UGDH UDP-glucose 6-dehydrogenase -0.0169022
RIOK3 RIO kinase 3 -0.0168869
RPL7A ribosomal protein L7a -0.0166147
DDIT4 DNA-damage-inducible transcript 4 -0.0166053
RPL36A ribosomal protein L36a -0.0164445