Dimethyl fumarate_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EZR ezrin 0.145
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.127906
TXNRD1 thioredoxin reductase 1 0.123591
KRT8 keratin 8, type II 0.121549
ANXA2 annexin A2 0.113856
NECTIN2 nectin cell adhesion molecule 2 0.112566
ACTN4 actinin, alpha 4 0.112458
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.102748
SAMD12 sterile alpha motif domain containing 12 0.102472
NDRG1 N-myc downstream regulated 1 0.0992648
FTH1 ferritin, heavy polypeptide 1 0.0949131
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0913495
PLAUR plasminogen activator, urokinase receptor 0.0836048
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0804863
CCSER1 coiled-coil serine-rich protein 1 0.0779506
ATXN1 ataxin 1 0.0770488
ITPKC inositol-trisphosphate 3-kinase C 0.0741191
PTK2 protein tyrosine kinase 2 0.0733604
KLF3 Kruppel-like factor 3 (basic) 0.0707315
FRY furry homolog (Drosophila) 0.0661933
KRT18 keratin 18, type I 0.0638984
JUP junction plakoglobin 0.0628182
GCLC glutamate-cysteine ligase, catalytic subunit 0.0612628
STK24 serine/threonine kinase 24 0.0610382
LAMB3 laminin, beta 3 0.0588764
NIBAN2 niban apoptosis regulator 2 0.0572529
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0570842
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0542835
PATJ PATJ crumbs cell polarity complex component 0.0541292
KRT19 keratin 19, type I 0.0533013
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0531095
ABHD2 abhydrolase domain containing 2 0.0526003
ITGB4 integrin, beta 4 0.0521846
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0511675
PRELID2 PRELI domain containing 2 0.051133
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0507707
TM4SF4 transmembrane 4 L six family member 4 0.0498571
ANXA11 annexin A11 0.0497858
MAML3 mastermind-like 3 (Drosophila) 0.0495083
MSN moesin 0.0494766
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0490978
ACTG1 actin gamma 1 0.0487727
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0487537
FAT1 FAT atypical cadherin 1 0.0479086
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.047393
ARHGAP32 Rho GTPase activating protein 32 0.0472796
CTTNBP2NL CTTNBP2 N-terminal like 0.0472581
C6ORF132 chromosome 6 open reading frame 132 0.0460845
KRT20 keratin 20, type I 0.0453733
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0453347
ITGA6 integrin, alpha 6 0.0445574
MBD5 methyl-CpG binding domain protein 5 0.0445346
TRPS1 trichorhinophalangeal syndrome I 0.0440127
NAMPT nicotinamide phosphoribosyltransferase 0.0432131
FBXO32 F-box protein 32 0.0430762
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0429461
DSPP dentin sialophosphoprotein 0.0425885
MYH9 myosin, heavy chain 9, non-muscle 0.0423058
GMDS GDP-mannose 4,6-dehydratase 0.0422902
BCL2L1 BCL2-like 1 0.0419055
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0414522
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0411899
RHPN2 rhophilin, Rho GTPase binding protein 2 0.041109
PDE4D phosphodiesterase 4D, cAMP-specific 0.0406647
ZBTB20 zinc finger and BTB domain containing 20 0.0405033
RTN4 reticulon 4 0.0400434
DIAPH2 diaphanous-related formin 2 0.039208
NF1 neurofibromin 1 0.0388373
USP54 ubiquitin specific peptidase 54 0.0381803
PGK1 phosphoglycerate kinase 1 0.0379077
AGRN agrin 0.0372047
PLEC plectin 0.0371848
LDHA lactate dehydrogenase A 0.0370913
PCED1B PC-esterase domain containing 1B 0.0364729
YPEL2 yippee-like 2 (Drosophila) 0.0364407
WASF2 WAS protein family, member 2 0.03621
SDC4 syndecan 4 0.0361947
TAS2R14 taste receptor, type 2, member 14 0.0361497
MUC13 mucin 13, cell surface associated 0.0360329
LPP LIM domain containing preferred translocation partner in lipoma 0.0357071
FOSL1 FOS-like antigen 1 0.0355853
SBF2 SET binding factor 2 0.0354328
NBEAL1 neurobeachin-like 1 0.0352569
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0348048
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0347284
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0335343
LPIN2 lipin 2 0.033354
FOXP1 forkhead box P1 0.0329815
MCL1 myeloid cell leukemia 1 0.0325485
TRIO trio Rho guanine nucleotide exchange factor 0.0325276
DNM2 dynamin 2 0.0325258
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0325003
RNF43 ring finger protein 43 0.0324996
TNS4 tensin 4 0.032234
VASP vasodilator-stimulated phosphoprotein 0.0320031
RPS6 ribosomal protein S6 0.0319483
MTMR10 myotubularin related protein 10 0.031871
CCNL1 cyclin L1 0.0318201
SLC45A4 solute carrier family 45, member 4 0.0316347
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0315616

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.191566
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.134913
FTL ferritin, light polypeptide -0.0879467
PDIA4 protein disulfide isomerase family A, member 4 -0.0828558
UBC ubiquitin C -0.0779518
RPS27A ribosomal protein S27a -0.0704997
TMSB10 thymosin beta 10 -0.0701104
PTMA prothymosin, alpha -0.0618864
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0598343
RPLP1 ribosomal protein, large, P1 -0.0593284
TJP1 tight junction protein 1 -0.0591093
PDIA3 protein disulfide isomerase family A, member 3 -0.0589999
INTS6 integrator complex subunit 6 -0.0547578
CALR calreticulin -0.0511551
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.050017
CANX calnexin -0.0492423
RPL23 ribosomal protein L23 -0.0468493
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0427803
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0410334
RPS25 ribosomal protein S25 -0.039323
IARS1 isoleucyl-tRNA synthetase 1 -0.0388553
RPLP2 ribosomal protein, large, P2 -0.0385919
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0382209
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0380658
MYH14 myosin, heavy chain 14, non-muscle -0.0379375
ADARB1 adenosine deaminase, RNA-specific, B1 -0.037504
RPS24 ribosomal protein S24 -0.0360096
SPAG9 sperm associated antigen 9 -0.0359775
SMAD3 SMAD family member 3 -0.0359316
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0348558
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0347626
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0329242
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0325915
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0320971
PCBP2 poly(rC) binding protein 2 -0.0320368
NTN4 netrin 4 -0.0311611
RTN3 reticulon 3 -0.0305421
ZNF207 zinc finger protein 207 -0.0303732
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0302747
KDM3A lysine (K)-specific demethylase 3A -0.0299162
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0292806
RPS19 ribosomal protein S19 -0.0281923
SEC31A SEC31 homolog A (S. cerevisiae) -0.0281401
GOLGA4 golgin A4 -0.028095
STAU1 staufen double-stranded RNA binding protein 1 -0.0274134
VMP1 vacuole membrane protein 1 -0.0272676
RPS5 ribosomal protein S5 -0.0269213
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0265535
HYOU1 hypoxia up-regulated 1 -0.0262861
TMCO3 transmembrane and coiled-coil domains 3 -0.0258262
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0257141
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0257003
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0256825
OGA O-GlcNAcase -0.0256318
RPL19 ribosomal protein L19 -0.0255515
PDIA6 protein disulfide isomerase family A, member 6 -0.0243179
MAGT1 magnesium transporter 1 -0.0240559
PDIA5 protein disulfide isomerase family A, member 5 -0.0238657
EIF1 eukaryotic translation initiation factor 1 -0.0238594
RPS17 ribosomal protein S17 -0.0238163
RPL5 ribosomal protein L5 -0.0237693
RPL35A ribosomal protein L35a -0.0236921
RPL31 ribosomal protein L31 -0.0235914
SSR1 signal sequence receptor, alpha -0.023281
PGCKA1 PDCD10 and GCKIII kinases associated 1 -0.0232015
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0230998
TMEM65 transmembrane protein 65 -0.023097
HDLBP high density lipoprotein binding protein -0.0230769
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0229131
UBE2B ubiquitin-conjugating enzyme E2B -0.0226812
GARS1 glycyl-tRNA synthetase 1 -0.0223809
SEC24D SEC24 family member D -0.0220515
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0215843
NUP98 nucleoporin 98kDa -0.0214582
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0212948
RPL34 ribosomal protein L34 -0.0209908
TRAM1 translocation associated membrane protein 1 -0.0205951
XPOT exportin, tRNA -0.020474
RPS23 ribosomal protein S23 -0.020266
RPS3 ribosomal protein S3 -0.0199459
USP53 ubiquitin specific peptidase 53 -0.0199451
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 -0.0197344
RNF24 ring finger protein 24 -0.0196213
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0195678
RPL9 ribosomal protein L9 -0.0195624
RAB7A RAB7A, member RAS oncogene family -0.0195521
LARP1B La ribonucleoprotein domain family, member 1B -0.0190978
LURAP1L leucine rich adaptor protein 1-like -0.019021
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0190108
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0188603
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0187829
SETX senataxin -0.0185626
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0185615
RAB3IP RAB3A interacting protein -0.0184805
RYBP RING1 and YY1 binding protein -0.0184216
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0183059
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 -0.0182327
RPS11 ribosomal protein S11 -0.0182279
RACK1 receptor for activated C kinase 1 -0.0180396
ZMYM2 zinc finger, MYM-type 2 -0.0180265