Dimethyl fumarate_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.111056
FTH1 ferritin, heavy polypeptide 1 0.0959658
ATP13A3 ATPase type 13A3 0.0760175
MYH9 myosin, heavy chain 9, non-muscle 0.07225
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0621847
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0599101
ZNF841 zinc finger protein 841 0.0585965
FLNB filamin B, beta 0.054447
SLC12A8 solute carrier family 12, member 8 0.0502911
HLA-A major histocompatibility complex, class I, A 0.0479811
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0479439
FLNA filamin A, alpha 0.0479281
SMAD3 SMAD family member 3 0.0428286
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0416184
FNDC3B fibronectin type III domain containing 3B 0.0404353
ELL2 elongation factor, RNA polymerase II, 2 0.0401607
PRRC2A proline-rich coiled-coil 2A 0.0379532
TRIO trio Rho guanine nucleotide exchange factor 0.036624
MSN moesin 0.0357252
LOC112694756 uncharaterized LOC112694756 0.0356544
BCL2L1 BCL2-like 1 0.0354178
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0333493
TPM3 tropomyosin 3 0.0319736
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0293595
UBA6 ubiquitin-like modifier activating enzyme 6 0.0291762
ARF4 ADP-ribosylation factor 4 0.0290823
ACTN1 actinin, alpha 1 0.0285167
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0284355
ERBIN erbb2 interacting protein 0.0278172
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0277589
CALU calumenin 0.0268672
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0266873
COL5A1 collagen, type V, alpha 1 0.026424
PODXL podocalyxin-like 0.0263584
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0251178
CD44 CD44 molecule (Indian blood group) 0.0250358
MCL1 myeloid cell leukemia 1 0.0248905
L1CAM L1 cell adhesion molecule 0.0248242
COL7A1 collagen, type VII, alpha 1 0.0245682
OSMR oncostatin M receptor 0.0241213
NUP153 nucleoporin 153kDa 0.0231681
NEK7 NIMA-related kinase 7 0.0224543
PICALM phosphatidylinositol binding clathrin assembly protein 0.0224524
CCNL1 cyclin L1 0.0222831
NAV2 neuron navigator 2 0.0218283
DIDO1 death inducer-obliterator 1 0.0217809
NCOR2 nuclear receptor corepressor 2 0.0217046
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) 0.0214727
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0214265
SUCO SUN domain containing ossification factor 0.0207878
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0204397
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0203532
TMEM41B transmembrane protein 41B 0.0201379
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0196439
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0195865
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0195673
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0194817
ARID1A AT rich interactive domain 1A (SWI-like) 0.0193934
SEC16A SEC16 homolog A (S. cerevisiae) 0.0193615
STC2 stanniocalcin 2 0.0193301
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0191318
ARGLU1 arginine and glutamate rich 1 0.0190818
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.0190115
ANO6 anoctamin 6 0.0187107
IL6ST interleukin 6 signal transducer 0.0186247
XPO6 exportin 6 0.0185033
ZNF148 zinc finger protein 148 0.0184957
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 0.0184759
TMF1 TATA element modulatory factor 1 0.0184126
VEGFC vascular endothelial growth factor C 0.0183632
DENND5A DENN/MADD domain containing 5A 0.0181629
LENG8 leukocyte receptor cluster (LRC) member 8 0.0181524
RASA2 RAS p21 protein activator 2 0.0180894
HPS3 Hermansky-Pudlak syndrome 3 0.0180864
TBK1 TANK-binding kinase 1 0.0178203
SDC4 syndecan 4 0.0177854
TBC1D23 TBC1 domain family, member 23 0.0176832
ELOVL5 ELOVL fatty acid elongase 5 0.0175657
KDM6A lysine (K)-specific demethylase 6A 0.0171461
HEG1 heart development protein with EGF-like domains 1 0.0170427
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0168718
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0165768
TLN1 talin 1 0.0164684
USP47 ubiquitin specific peptidase 47 0.0163085
SEPTIN9 septin 9 0.0161742
FAM219A family with sequence similarity 219, member A 0.0157147
RPL3 ribosomal protein L3 0.0156189
OSBP oxysterol binding protein 0.0155626
YEATS2 YEATS domain containing 2 0.0154262
ICE1 interactor of little elongation complex ELL subunit 1 0.0153756
MIDEAS mitotic deacetylase associated SANT domain protein 0.0153198
SCFD2 sec1 family domain containing 2 0.0152434
NAMPT nicotinamide phosphoribosyltransferase 0.0152378
HELZ helicase with zinc finger 0.0151328
DDB1 damage-specific DNA binding protein 1, 127kDa 0.0150784
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0148116
ECPAS Ecm29 proteasome adaptor and scaffold 0.0147467
SRRM2 serine/arginine repetitive matrix 2 0.0147361
CPAP centrosome assembly and centriole elongation protein 0.0146991
PMM2 phosphomannomutase 2 0.0146786

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.17983
FTL ferritin, light polypeptide -0.177438
NALF1 NALCN channel auxiliary factor 1 -0.153118
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0969507
FN1 fibronectin 1 -0.0938312
IGFBP3 insulin-like growth factor binding protein 3 -0.0905357
ABI3BP ABI family, member 3 (NESH) binding protein -0.0872708
MARCKS myristoylated alanine-rich protein kinase C substrate -0.079679
MT1X metallothionein 1X -0.0784065
TMSB10 thymosin beta 10 -0.0712245
DEK DEK proto-oncogene -0.069242
RPL35A ribosomal protein L35a -0.0685522
TPT1 tumor protein, translationally-controlled 1 -0.0678385
PTMA prothymosin, alpha -0.067578
RPS6 ribosomal protein S6 -0.0634358
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0617937
PHACTR1 phosphatase and actin regulator 1 -0.0598065
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0582503
VIM vimentin -0.0550727
INTS6 integrator complex subunit 6 -0.053675
AKAP12 A kinase (PRKA) anchor protein 12 -0.0499215
RPLP2 ribosomal protein, large, P2 -0.0485714
DLG1 discs, large homolog 1 (Drosophila) -0.0484873
RPS8 ribosomal protein S8 -0.0469594
HMGB1 high mobility group box 1 -0.0467299
NAP1L1 nucleosome assembly protein 1-like 1 -0.0450022
RPL12 ribosomal protein L12 -0.0435881
HLA-B major histocompatibility complex, class I, B -0.0433822
AHNAK AHNAK nucleoprotein -0.0419293
S100A10 S100 calcium binding protein A10 -0.0410367
RPL23 ribosomal protein L23 -0.0407201
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0392909
IFI6 interferon, alpha-inducible protein 6 -0.0382829
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0374994
GNAS GNAS complex locus -0.0373904
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0359268
RPLP1 ribosomal protein, large, P1 -0.0348778
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0336606
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0334334
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0332037
TLE4 transducin-like enhancer of split 4 -0.0326074
UGCG UDP-glucose ceramide glucosyltransferase -0.0315751
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0312707
ADM adrenomedullin -0.030517
RPS24 ribosomal protein S24 -0.0304387
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0304234
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0298483
F3 coagulation factor III (thromboplastin, tissue factor) -0.0295986
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0289348
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0282167
RPL34 ribosomal protein L34 -0.0280441
RPS3 ribosomal protein S3 -0.0275934
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.027259
IFITM3 interferon induced transmembrane protein 3 -0.0272268
BASP1 brain abundant, membrane attached signal protein 1 -0.0269787
B2M beta-2-microglobulin -0.026288
CAVIN1 caveolae associated protein 1 -0.0258087
TMSB4X thymosin beta 4, X-linked -0.0257214
IER3 immediate early response 3 -0.0256377
CCND1 cyclin D1 -0.0247529
RPS19 ribosomal protein S19 -0.0245955
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0245424
IGFBP5 insulin-like growth factor binding protein 5 -0.0244502
VDAC1 voltage-dependent anion channel 1 -0.0243426
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0241752
EIF5B eukaryotic translation initiation factor 5B -0.0238363
RPS21 ribosomal protein S21 -0.0237819
RPS13 ribosomal protein S13 -0.0237684
S100A6 S100 calcium binding protein A6 -0.0233279
PLCB4 phospholipase C, beta 4 -0.0232764
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0232659
RPL31 ribosomal protein L31 -0.0231713
RAI14 retinoic acid induced 14 -0.023142
RPL26 ribosomal protein L26 -0.0230085
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0229935
RPS23 ribosomal protein S23 -0.0229681
C6ORF62 chromosome 6 open reading frame 62 -0.0228822
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0228584
RPL32 ribosomal protein L32 -0.0224254
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0223574
RPL35 ribosomal protein L35 -0.0222078
RAB7A RAB7A, member RAS oncogene family -0.0221637
CDK6 cyclin-dependent kinase 6 -0.0221449
ACTG1 actin gamma 1 -0.0220174
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0219248
DIAPH3 diaphanous-related formin 3 -0.0217364
PLIN2 perilipin 2 -0.0215336
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0215303
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.021435
RPL11 ribosomal protein L11 -0.0214128
TPM4 tropomyosin 4 -0.0213425
JUN jun proto-oncogene -0.0212378
RPL37 ribosomal protein L37 -0.0212198
RPL36A ribosomal protein L36a -0.0211807
KRT7 keratin 7, type II -0.0209643
EIF1 eukaryotic translation initiation factor 1 -0.0209623
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0208034
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0206779
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.020587
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0205227