Dimethyl fumarate_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CES1 carboxylesterase 1 0.133711
EGFR epidermal growth factor receptor 0.0859856
MCL1 myeloid cell leukemia 1 0.0817185
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0673191
FAM13A family with sequence similarity 13, member A 0.0672438
NDRG1 N-myc downstream regulated 1 0.0657048
SOD2 superoxide dismutase 2, mitochondrial 0.0630238
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0600722
FTH1 ferritin, heavy polypeptide 1 0.0559988
SLTM SAFB-like, transcription modulator 0.0557508
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0519059
LAMC2 laminin, gamma 2 0.0511097
NGLY1 N-glycanase 1 0.0484883
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.046327
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.045192
CAMTA1 calmodulin binding transcription activator 1 0.0448038
MYH9 myosin, heavy chain 9, non-muscle 0.0425914
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0387723
SRRM2 serine/arginine repetitive matrix 2 0.0358566
FRY furry homolog (Drosophila) 0.0334352
RUNX1 runt-related transcription factor 1 0.0326632
NPC1 Niemann-Pick disease, type C1 0.0324073
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0306895
YEATS2 YEATS domain containing 2 0.030378
MYO1B myosin IB 0.0303141
CDCP1 CUB domain containing protein 1 0.0293859
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0282923
AGO2 argonaute RISC catalytic component 2 0.0281128
LAMA4 laminin, alpha 4 0.0281032
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0280214
ANO6 anoctamin 6 0.0278239
OSMR oncostatin M receptor 0.0272377
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0263265
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0262584
TBC1D22A TBC1 domain family, member 22A 0.0255507
LAMB3 laminin, beta 3 0.0251328
ZNF292 zinc finger protein 292 0.0248873
UBA6 ubiquitin-like modifier activating enzyme 6 0.0248214
SMAD3 SMAD family member 3 0.0245025
PLEC plectin 0.024284
CCNL1 cyclin L1 0.0242702
TMEM45B transmembrane protein 45B 0.0242129
SAMD4A sterile alpha motif domain containing 4A 0.0238258
HOOK2 hook microtubule-tethering protein 2 0.0234037
TSC22D2 TSC22 domain family, member 2 0.0225629
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.022526
MIDEAS mitotic deacetylase associated SANT domain protein 0.0222338
SDC4 syndecan 4 0.0221469
RASA2 RAS p21 protein activator 2 0.0214257
WDFY3 WD repeat and FYVE domain containing 3 0.0214208
GPATCH2L G patch domain containing 2-like 0.0213635
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 0.0211962
CYFIP1 cytoplasmic FMR1 interacting protein 1 0.0211409
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0208235
TMEM165 transmembrane protein 165 0.0206433
RLIM ring finger protein, LIM domain interacting 0.0205553
RAB27B RAB27B, member RAS oncogene family 0.020546
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0204468
PYGL phosphorylase, glycogen, liver 0.0201955
ZC3H11A zinc finger CCCH-type containing 11A 0.0200342
ZNF638 zinc finger protein 638 0.0199207
TNIP1 TNFAIP3 interacting protein 1 0.0198774
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.01973
TXNRD1 thioredoxin reductase 1 0.0195237
STC1 stanniocalcin 1 0.0195107
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0194608
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0194328
BLZF1 basic leucine zipper nuclear factor 1 0.0194301
ZMYND8 zinc finger, MYND-type containing 8 0.0192996
ARGLU1 arginine and glutamate rich 1 0.0192635
TPM3 tropomyosin 3 0.0191718
ELL2 elongation factor, RNA polymerase II, 2 0.0189093
WDR26 WD repeat domain 26 0.0187867
SNX9 sorting nexin 9 0.0187818
ANKRD12 ankyrin repeat domain 12 0.0185961
DOCK5 dedicator of cytokinesis 5 0.018396
BACE2 beta-site APP-cleaving enzyme 2 0.0183953
CCNG2 cyclin G2 0.0183212
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0183006
RPL3 ribosomal protein L3 0.0182706
MSN moesin 0.0182265
KMT2D lysine (K)-specific methyltransferase 2D 0.0180115
NAMPT nicotinamide phosphoribosyltransferase 0.0180085
GRB10 growth factor receptor-bound protein 10 0.0178469
RNF149 ring finger protein 149 0.0178455
CEMIP cell migration inducing protein, hyaluronan binding 0.0178336
ADAM9 ADAM metallopeptidase domain 9 0.0177261
DTNA dystrobrevin, alpha 0.0177131
C1D C1D nuclear receptor corepressor 0.017655
FAT1 FAT atypical cadherin 1 0.0172182
OGA O-GlcNAcase 0.017175
LOC112694756 uncharaterized LOC112694756 0.0171711
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0171517
EIF4B eukaryotic translation initiation factor 4B 0.0169037
DUSP5 dual specificity phosphatase 5 0.0168419
ATP13A3 ATPase type 13A3 0.0168195
FNIP1 folliculin interacting protein 1 0.0168169
KDM2A lysine (K)-specific demethylase 2A 0.0168069
MON2 MON2 homolog (S. cerevisiae) 0.0166831
IFNAR2 interferon (alpha, beta and omega) receptor 2 0.0166131

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.210757
TMSB10 thymosin beta 10 -0.13323
MT2A metallothionein 2A -0.103715
ASPH aspartate beta-hydroxylase -0.0831874
THSD4 thrombospondin, type I, domain containing 4 -0.0816637
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0813677
CAV1 caveolin 1, caveolae protein, 22kDa -0.0802293
PTPRM protein tyrosine phosphatase, receptor type, M -0.0761538
TPT1 tumor protein, translationally-controlled 1 -0.0711138
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0704986
RPS3 ribosomal protein S3 -0.0666103
PDE4D phosphodiesterase 4D, cAMP-specific -0.0647449
PTMA prothymosin, alpha -0.0641284
MYOF myoferlin -0.0616293
FTL ferritin, light polypeptide -0.0597709
SEC61G Sec61 gamma subunit -0.058156
RPLP1 ribosomal protein, large, P1 -0.0576934
S100A10 S100 calcium binding protein A10 -0.0566653
INTS6 integrator complex subunit 6 -0.0563672
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0562397
RPL35A ribosomal protein L35a -0.05083
PDLIM5 PDZ and LIM domain 5 -0.0505172
ACTG1 actin gamma 1 -0.0489025
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0452809
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0442615
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0438313
RPS24 ribosomal protein S24 -0.0433495
RPS8 ribosomal protein S8 -0.0431516
RPS12 ribosomal protein S12 -0.0424437
RPS25 ribosomal protein S25 -0.040586
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0396568
RIMS2 regulating synaptic membrane exocytosis 2 -0.0393214
RPL37A ribosomal protein L37a -0.0382505
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.038177
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.038077
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0368975
KRT7 keratin 7, type II -0.0366654
ANXA2 annexin A2 -0.0365638
PM20D1 peptidase M20 domain containing 1 -0.0359907
RPS27A ribosomal protein S27a -0.035245
RPS6 ribosomal protein S6 -0.0343886
RPL34 ribosomal protein L34 -0.0334877
EIF1 eukaryotic translation initiation factor 1 -0.0334268
RPS23 ribosomal protein S23 -0.0334179
UGDH UDP-glucose 6-dehydrogenase -0.0332668
HOMER1 homer scaffolding protein 1 -0.0321884
KRT18 keratin 18, type I -0.0320741
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.031518
IGFBP5 insulin-like growth factor binding protein 5 -0.0308855
S100P S100 calcium binding protein P -0.0308517
RPLP0 ribosomal protein, large, P0 -0.0302175
RPS29 ribosomal protein S29 -0.0300418
CCND1 cyclin D1 -0.0288116
RPL12 ribosomal protein L12 -0.0287728
RPL31 ribosomal protein L31 -0.0287661
RAB7A RAB7A, member RAS oncogene family -0.0286576
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0284902
NAP1L1 nucleosome assembly protein 1-like 1 -0.0283391
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -0.0281827
PKM pyruvate kinase, muscle -0.0280608
GNAS GNAS complex locus -0.0277371
AKR1C1 aldo-keto reductase family 1, member C1 -0.0276967
IFI6 interferon, alpha-inducible protein 6 -0.0274171
RPS27 ribosomal protein S27 -0.0273418
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0271707
RPS19 ribosomal protein S19 -0.0260822
MAP7 microtubule-associated protein 7 -0.0259745
AKAP12 A kinase (PRKA) anchor protein 12 -0.0256331
ATF4 activating transcription factor 4 -0.0252081
RPL23 ribosomal protein L23 -0.0246693
SMYD3 SET and MYND domain containing 3 -0.0243592
RPL7 ribosomal protein L7 -0.0242093
RPL19 ribosomal protein L19 -0.0240537
VCL vinculin -0.0240394
RPLP2 ribosomal protein, large, P2 -0.0238684
RPS21 ribosomal protein S21 -0.0235583
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0235468
TOP1 topoisomerase (DNA) I -0.0232651
B2M beta-2-microglobulin -0.0232419
C15ORF48 chromosome 15 open reading frame 48 -0.0230045
MORF4L2 mortality factor 4 like 2 -0.0228327
IER3 immediate early response 3 -0.022773
TAS2R14 taste receptor, type 2, member 14 -0.0227427
S100A9 S100 calcium binding protein A9 -0.0227289
LMO7 LIM domain 7 -0.0225673
SPDYA speedy/RINGO cell cycle regulator family member A -0.0224839
RPL8 ribosomal protein L8 -0.0224727
RACK1 receptor for activated C kinase 1 -0.0223489
RPS14 ribosomal protein S14 -0.0222489
MT1X metallothionein 1X -0.0218246
RPL11 ribosomal protein L11 -0.0213984
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0209861
CST3 cystatin C -0.0209702
ANKRD37 ankyrin repeat domain 37 -0.020825
MAML3 mastermind-like 3 (Drosophila) -0.020804
RPL30 ribosomal protein L30 -0.0206747
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0206551
S100A11 S100 calcium binding protein A11 -0.020562
RPL36A ribosomal protein L36a -0.0204726
SCEL sciellin -0.0204325