Dimethyl fumarate_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.151444
TXNRD1 thioredoxin reductase 1 0.074975
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0643849
TM4SF1 transmembrane 4 L six family member 1 0.0508393
HSPA8 heat shock 70kDa protein 8 0.0438715
MCL1 myeloid cell leukemia 1 0.0411105
MKI67 marker of proliferation Ki-67 0.037012
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0313284
SPTBN1 spectrin, beta, non-erythrocytic 1 0.031305
CENPF centromere protein F, 350/400kDa 0.02908
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0286929
RPL3 ribosomal protein L3 0.0272958
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0265895
RAD21 RAD21 homolog (S. pombe) 0.0257448
MIS18BP1 MIS18 binding protein 1 0.0255537
TPM3 tropomyosin 3 0.024337
TPX2 TPX2, microtubule-associated 0.0236482
FTH1 ferritin, heavy polypeptide 1 0.0235947
WDR43 WD repeat domain 43 0.0232467
HLA-B major histocompatibility complex, class I, B 0.0228689
RPL4 ribosomal protein L4 0.0226499
NCEH1 neutral cholesterol ester hydrolase 1 0.0225475
NUP58 nucleoporin 58 0.0224604
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0220158
SLC38A2 solute carrier family 38, member 2 0.0217954
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0217729
USP3 ubiquitin specific peptidase 3 0.0207867
RTN4 reticulon 4 0.0207614
SRRM2 serine/arginine repetitive matrix 2 0.0204591
NCAPD2 non-SMC condensin I complex, subunit D2 0.0201296
RFWD3 ring finger and WD repeat domain 3 0.0199624
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0197174
RPL31 ribosomal protein L31 0.0196787
AURKA aurora kinase A 0.0192805
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0189246
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0185101
RRM2 ribonucleotide reductase M2 0.017962
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0179367
CALU calumenin 0.0178624
CXCL8 chemokine (C-X-C motif) ligand 8 0.0178022
DGKD diacylglycerol kinase, delta 130kDa 0.0177078
TRA2B transformer 2 beta homolog (Drosophila) 0.0176567
ARL5B ADP-ribosylation factor-like 5B 0.017258
KIF5B kinesin family member 5B 0.0170509
HDGF hepatoma-derived growth factor 0.0169369
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0169217
ATP5F1B ATP synthase F1 subunit beta 0.0167338
CENPE centromere protein E, 312kDa 0.0165907
BCLAF1 BCL2-associated transcription factor 1 0.0165685
ADAM17 ADAM metallopeptidase domain 17 0.0165343
HLA-A major histocompatibility complex, class I, A 0.0163804
CASC3 cancer susceptibility candidate 3 0.016327
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.0162853
ANLN anillin, actin binding protein 0.0161788
CKAP5 cytoskeleton associated protein 5 0.0161733
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.016148
CCNL1 cyclin L1 0.0160811
KPNB1 karyopherin (importin) beta 1 0.0159976
EEF2 eukaryotic translation elongation factor 2 0.0157629
ENO1 enolase 1, (alpha) 0.0157377
KIF23 kinesin family member 23 0.0156503
MORF4L1 mortality factor 4 like 1 0.0156153
MT1F metallothionein 1F 0.0155336
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0154957
XPO1 exportin 1 0.0152267
FAM168A family with sequence similarity 168, member A 0.0151797
PM20D1 peptidase M20 domain containing 1 0.0151208
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0150974
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0148374
BIRC2 baculoviral IAP repeat containing 2 0.0148175
ADAR adenosine deaminase, RNA-specific 0.0147309
EIF3L eukaryotic translation initiation factor 3, subunit L 0.0146342
ITGB5 integrin, beta 5 0.0144486
HLA-E major histocompatibility complex, class I, E 0.0142973
RBM39 RNA binding motif protein 39 0.0142329
NNMT nicotinamide N-methyltransferase 0.0142106
EIF4B eukaryotic translation initiation factor 4B 0.0141985
IQGAP3 IQ motif containing GTPase activating protein 3 0.0141806
PRRC2A proline-rich coiled-coil 2A 0.0139058
TFG TRK-fused gene 0.0138542
ARHGAP11A Rho GTPase activating protein 11A 0.0138541
NUMA1 nuclear mitotic apparatus protein 1 0.0137078
FLOT1 flotillin 1 0.013678
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0135875
ANKRD28 ankyrin repeat domain 28 0.0135707
FGA fibrinogen alpha chain 0.0134621
GORASP2 golgi reassembly stacking protein 2, 55kDa 0.0134414
TCIM transcriptional and immune response regulator 0.0133918
SCAF8 SR-related CTD-associated factor 8 0.013372
NUP153 nucleoporin 153kDa 0.0133383
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0133353
SPIRE1 spire-type actin nucleation factor 1 0.0132801
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.013186
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0131809
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0131354
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0130317
CAMTA1 calmodulin binding transcription activator 1 0.0129842
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0129784
TMEM214 transmembrane protein 214 0.0126209
TNPO1 transportin 1 0.0126129

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.196199
PDE4D phosphodiesterase 4D, cAMP-specific -0.136758
FTL ferritin, light polypeptide -0.116554
TMSB10 thymosin beta 10 -0.106473
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105593
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0916618
THSD4 thrombospondin, type I, domain containing 4 -0.0829964
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0761621
BASP1 brain abundant, membrane attached signal protein 1 -0.0755367
FMNL2 formin-like 2 -0.0750301
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0713473
DST dystonin -0.0610194
FNDC3B fibronectin type III domain containing 3B -0.0590001
DOCK4 dedicator of cytokinesis 4 -0.0566668
SAMD4A sterile alpha motif domain containing 4A -0.0521104
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0491356
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0480926
EGFR epidermal growth factor receptor -0.047612
ARHGAP26 Rho GTPase activating protein 26 -0.0458198
FLNB filamin B, beta -0.0454347
NEGR1 neuronal growth regulator 1 -0.045433
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0451028
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0450058
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0448142
RPL23 ribosomal protein L23 -0.0445992
MT2A metallothionein 2A -0.0440336
SMOC1 SPARC related modular calcium binding 1 -0.0440292
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0437003
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0426482
IGFBP3 insulin-like growth factor binding protein 3 -0.0426383
AHNAK AHNAK nucleoprotein -0.0423114
ACTG1 actin gamma 1 -0.0421144
TRIO trio Rho guanine nucleotide exchange factor -0.0418547
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.040974
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0407102
PARD3 par-3 family cell polarity regulator -0.0400597
S100A6 S100 calcium binding protein A6 -0.0395392
RPL36 ribosomal protein L36 -0.0382922
RPS21 ribosomal protein S21 -0.037905
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0374761
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0360815
TFPI2 tissue factor pathway inhibitor 2 -0.0360201
EXT1 exostosin glycosyltransferase 1 -0.0348383
CMIP c-Maf inducing protein -0.0347495
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0344148
UTRN utrophin -0.03441
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0342224
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0340284
MAML3 mastermind-like 3 (Drosophila) -0.0339027
IER3 immediate early response 3 -0.0334266
RPS19 ribosomal protein S19 -0.0333224
PFN1 profilin 1 -0.0324634
SLC35F3 solute carrier family 35, member F3 -0.0323889
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0323435
EFNA5 ephrin-A5 -0.0323331
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0321112
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0319548
TPM1 tropomyosin 1 (alpha) -0.0315211
RPL18 ribosomal protein L18 -0.0312646
ZBTB20 zinc finger and BTB domain containing 20 -0.03015
EHBP1 EH domain binding protein 1 -0.0296785
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0291688
RPLP1 ribosomal protein, large, P1 -0.0282276
SVIL supervillin -0.0281446
KYNU kynureninase -0.0275867
CUX1 cut-like homeobox 1 -0.0274218
CAVIN1 caveolae associated protein 1 -0.0271169
ELL2 elongation factor, RNA polymerase II, 2 -0.0269424
INTS6 integrator complex subunit 6 -0.0266186
LPP LIM domain containing preferred translocation partner in lipoma -0.0265926
ASPH aspartate beta-hydroxylase -0.0261699
RAB7A RAB7A, member RAS oncogene family -0.0259821
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0259584
RPL19 ribosomal protein L19 -0.0258322
NPAS2 neuronal PAS domain protein 2 -0.0252142
RPL8 ribosomal protein L8 -0.0251885
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0249215
GLIS3 GLIS family zinc finger 3 -0.0248909
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0246491
GNAS GNAS complex locus -0.0244851
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0244217
RPS27A ribosomal protein S27a -0.0243729
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0242184
NEBL nebulette -0.02398
MYOF myoferlin -0.0238289
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0233372
SERF2 small EDRK-rich factor 2 -0.0229913
ATP5F1E ATP synthase F1 subunit epsilon -0.0227884
CYTH1 cytohesin 1 -0.0226174
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0225246
PTPRG protein tyrosine phosphatase, receptor type, G -0.0223472
MYO1E myosin IE -0.0223023
SPDYA speedy/RINGO cell cycle regulator family member A -0.0222279
CTBP2 C-terminal binding protein 2 -0.0221047
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0218669
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0216903
MACF1 microtubule-actin crosslinking factor 1 -0.0216844
EPAS1 endothelial PAS domain protein 1 -0.0207702
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0207563
BICC1 BicC family RNA binding protein 1 -0.0207545