Dimethyl fumarate_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dimethyl fumarate perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dimethyl fumarate_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYO1E myosin IE 0.131093
EZR ezrin 0.105919
FAT1 FAT atypical cadherin 1 0.103309
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0994526
GPC6 glypican 6 0.0873066
FN1 fibronectin 1 0.0861578
LAMC2 laminin, gamma 2 0.0842727
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0841543
AKAP12 A kinase (PRKA) anchor protein 12 0.0833497
RORA RAR-related orphan receptor A 0.0799172
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0794766
ELL2 elongation factor, RNA polymerase II, 2 0.0734326
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0732411
FLNB filamin B, beta 0.0722056
CCNY cyclin Y 0.0718001
VCL vinculin 0.0702993
HP1BP3 heterochromatin protein 1, binding protein 3 0.0694339
NALF1 NALCN channel auxiliary factor 1 0.0692638
BRWD1 bromodomain and WD repeat domain containing 1 0.0684906
RUNX1 runt-related transcription factor 1 0.0676877
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0665485
LAMA4 laminin, alpha 4 0.0661839
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0651061
POTEF POTE ankyrin domain family, member F 0.0621994
SRRM2 serine/arginine repetitive matrix 2 0.0616035
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0584432
HMGA2 high mobility group AT-hook 2 0.0580057
MT2A metallothionein 2A 0.0555696
MSI2 musashi RNA-binding protein 2 0.0554453
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0538098
MYH9 myosin, heavy chain 9, non-muscle 0.0537566
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0536926
DIAPH2 diaphanous-related formin 2 0.0532295
ERRFI1 ERBB receptor feedback inhibitor 1 0.0531972
AKAP13 A kinase (PRKA) anchor protein 13 0.0530139
NHSL1 NHS-like 1 0.0529196
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0526287
ANO6 anoctamin 6 0.0520865
MCTP2 multiple C2 domains, transmembrane 2 0.0518139
PKN2 protein kinase N2 0.0517599
ERBIN erbb2 interacting protein 0.0516425
CAB39 calcium binding protein 39 0.0510528
CEMIP cell migration inducing protein, hyaluronan binding 0.0507571
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.050462
MYO1D myosin ID 0.0499427
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0497407
EGFR epidermal growth factor receptor 0.0496382
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0493075
GLS2 glutaminase 2 (liver, mitochondrial) 0.0484727
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0482928
NRIP1 nuclear receptor interacting protein 1 0.0479314
PDE4D phosphodiesterase 4D, cAMP-specific 0.0475443
MCL1 myeloid cell leukemia 1 0.0475348
FAM193A family with sequence similarity 193, member A 0.0474469
CAPN2 calpain 2, (m/II) large subunit 0.0474161
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0470925
TMEM165 transmembrane protein 165 0.0460574
ATP11A ATPase, class VI, type 11A 0.0455738
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0455143
SAMD4A sterile alpha motif domain containing 4A 0.0454984
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0453509
TBC1D5 TBC1 domain family, member 5 0.0448152
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0446282
TRIO trio Rho guanine nucleotide exchange factor 0.0443327
C1D C1D nuclear receptor corepressor 0.0436143
PSD3 pleckstrin and Sec7 domain containing 3 0.0435527
TCF12 transcription factor 12 0.0433356
PBX3 pre-B-cell leukemia homeobox 3 0.0429965
ZNF292 zinc finger protein 292 0.0424568
JUP junction plakoglobin 0.0420569
SPRED2 sprouty-related, EVH1 domain containing 2 0.0416907
THSD4 thrombospondin, type I, domain containing 4 0.041668
RPL37 ribosomal protein L37 0.0410938
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0410369
BCLAF1 BCL2-associated transcription factor 1 0.0409008
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0406875
ETF1 eukaryotic translation termination factor 1 0.0404277
SLMAP sarcolemma associated protein 0.0401868
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0399663
RBM6 RNA binding motif protein 6 0.0398225
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0397477
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0394158
PHF3 PHD finger protein 3 0.0393423
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0393394
WDFY2 WD repeat and FYVE domain containing 2 0.039124
ACTN4 actinin, alpha 4 0.038842
RAD51B RAD51 paralog B 0.0381548
SP3 Sp3 transcription factor 0.0377544
KDM4C lysine (K)-specific demethylase 4C 0.0374407
SMAD3 SMAD family member 3 0.0373233
SBF2 SET binding factor 2 0.0369108
DTNA dystrobrevin, alpha 0.0368444
SYNGAP1 synaptic Ras GTPase activating protein 1 0.0367867
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0358016
TPD52 tumor protein D52 0.035523
FNIP1 folliculin interacting protein 1 0.0344257
USP3 ubiquitin specific peptidase 3 0.033784
TAS2R14 taste receptor, type 2, member 14 0.0337396
HLA-B major histocompatibility complex, class I, B 0.0335208
ATP5F1B ATP synthase F1 subunit beta 0.0334264

decreased expression

Symbol Name Standardized Value
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.148691
FTL ferritin, light polypeptide -0.135341
GRB10 growth factor receptor-bound protein 10 -0.127587
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.12242
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.118833
NPEPPS aminopeptidase puromycin sensitive -0.117773
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.115826
RSAD2 radical S-adenosyl methionine domain containing 2 -0.108795
DSCAM Down syndrome cell adhesion molecule -0.0965011
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0929092
TMSB10 thymosin beta 10 -0.0916886
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.086529
SRPK2 SRSF protein kinase 2 -0.0864874
RPS19 ribosomal protein S19 -0.0832422
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0797699
IFIH1 interferon induced with helicase C domain 1 -0.0792386
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.079017
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0778452
SAR1A secretion associated, Ras related GTPase 1A -0.0752637
AKAP9 A kinase (PRKA) anchor protein 9 -0.0740008
ITCH itchy E3 ubiquitin protein ligase -0.0731493
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0695514
NEBL nebulette -0.068639
TXNIP thioredoxin interacting protein -0.0677956
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0656637
UBC ubiquitin C -0.0638086
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0621358
WARS1 tryptophanyl-tRNA synthetase 1 -0.061308
NPTN neuroplastin -0.0610927
ZMYM2 zinc finger, MYM-type 2 -0.0605641
SLC38A1 solute carrier family 38, member 1 -0.0599941
FNDC3A fibronectin type III domain containing 3A -0.0588025
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0580924
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0579837
OGA O-GlcNAcase -0.0570847
USP53 ubiquitin specific peptidase 53 -0.0565433
SAMD9 sterile alpha motif domain containing 9 -0.0565232
KMT2C lysine (K)-specific methyltransferase 2C -0.0545494
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0544491
KTN1 kinectin 1 (kinesin receptor) -0.0544056
RBM39 RNA binding motif protein 39 -0.0541554
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.05412
S100A10 S100 calcium binding protein A10 -0.0523795
TBCA tubulin folding cofactor A -0.052179
PDE10A phosphodiesterase 10A -0.0519947
FBXL20 F-box and leucine-rich repeat protein 20 -0.0505659
TRA2A transformer 2 alpha homolog (Drosophila) -0.0503127
RIGI RNA sensor RIG-I -0.0492975
ZNF638 zinc finger protein 638 -0.0492681
TMEM41B transmembrane protein 41B -0.0491391
KIAA1217 KIAA1217 -0.0489679
GPBP1L1 GC-rich promoter binding protein 1-like 1 -0.0485214
AFAP1 actin filament associated protein 1 -0.0484723
NAMPT nicotinamide phosphoribosyltransferase -0.04836
PHF21A PHD finger protein 21A -0.0482652
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0473285
CANX calnexin -0.0471892
PRELID2 PRELI domain containing 2 -0.0469763
GOLGB1 golgin B1 -0.0461543
ATOSA atos homolog A -0.0461315
AHNAK AHNAK nucleoprotein -0.0460825
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0459053
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0443
SEC24D SEC24 family member D -0.0442078
FNBP4 formin binding protein 4 -0.0441594
S100A6 S100 calcium binding protein A6 -0.0434636
ZFC3H1 zinc finger, C3H1-type containing -0.0434586
MAPK6 mitogen-activated protein kinase 6 -0.0434121
LNPEP leucyl/cystinyl aminopeptidase -0.0430152
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0428874
TOR1AIP2 torsin A interacting protein 2 -0.0425835
CD2AP CD2-associated protein -0.0425395
ACVR1 activin A receptor, type I -0.0422419
DOCK9 dedicator of cytokinesis 9 -0.0417303
ZNFX1 zinc finger, NFX1-type containing 1 -0.041709
NEK7 NIMA-related kinase 7 -0.0410417
LAMB1 laminin, beta 1 -0.0406369
RPS13 ribosomal protein S13 -0.0402027
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0401919
RUFY1 RUN and FYVE domain containing 1 -0.0401808
DICER1 dicer 1, ribonuclease type III -0.0401323
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0389873
CDC42 cell division cycle 42 -0.0388927
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0385535
H3-3B H3.3 histone B -0.0382389
AFF1 AF4/FMR2 family, member 1 -0.038038
RAB8B RAB8B, member RAS oncogene family -0.0378576
PTMA prothymosin, alpha -0.0378187
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0376993
HOOK3 hook microtubule-tethering protein 3 -0.0376309
KIAA1671 KIAA1671 -0.0374583
NCOA7 nuclear receptor coactivator 7 -0.0374206
IFI16 interferon, gamma-inducible protein 16 -0.0373354
AFF4 AF4/FMR2 family, member 4 -0.0367068
ABHD17C abhydrolase domain containing 17C -0.0362276
DENND4C DENN/MADD domain containing 4C -0.0362015
TANK TRAF family member-associated NFKB activator -0.0360987
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.036035
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.035672
LMAN1 lectin, mannose-binding, 1 -0.0354685