Dinaciclib_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Dinaciclib perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Dinaciclib_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.217085
THBS1 thrombospondin 1 0.153575
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.124147
POTEF POTE ankyrin domain family, member F 0.0880617
FLNA filamin A, alpha 0.0878559
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0807565
TPM4 tropomyosin 4 0.0640666
RPS4X ribosomal protein S4, X-linked 0.0631363
TPT1 tumor protein, translationally-controlled 1 0.0598005
DEK DEK proto-oncogene 0.054513
VIM vimentin 0.0531071
RPS6 ribosomal protein S6 0.0522434
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0516481
EEF2 eukaryotic translation elongation factor 2 0.0482764
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0476787
CALR calreticulin 0.0460947
TMSB4X thymosin beta 4, X-linked 0.0460826
PTMA prothymosin, alpha 0.0455271
HLA-B major histocompatibility complex, class I, B 0.0402363
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.040172
ACTG1 actin gamma 1 0.0397847
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0388186
AKAP12 A kinase (PRKA) anchor protein 12 0.0375512
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0372814
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.036941
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0364254
TPM1 tropomyosin 1 (alpha) 0.0358989
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0355053
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0353341
SFRP1 secreted frizzled-related protein 1 0.0343427
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0337764
RPL11 ribosomal protein L11 0.033697
MSN moesin 0.0336542
KRT18 keratin 18, type I 0.0333626
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0328175
FN1 fibronectin 1 0.0326178
CANX calnexin 0.0314318
ANXA2 annexin A2 0.0314311
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0308993
SMC1A structural maintenance of chromosomes 1A 0.0303489
RPS8 ribosomal protein S8 0.0302767
RPL19 ribosomal protein L19 0.0293631
ENO1 enolase 1, (alpha) 0.0290111
SET SET nuclear proto-oncogene 0.0289165
RPS24 ribosomal protein S24 0.0278617
NAP1L1 nucleosome assembly protein 1-like 1 0.026954
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0257114
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa 0.0253591
RPS12 ribosomal protein S12 0.0249655
YBX1 Y box binding protein 1 0.0249069
TEX14 testis expressed 14 0.024721
DSTN destrin (actin depolymerizing factor) 0.0246143
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0242518
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0235798
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0235029
CALD1 caldesmon 1 0.0229574
CSDE1 cold shock domain containing E1, RNA-binding 0.0227888
GLIPR1 GLI pathogenesis-related 1 0.0227328
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0226796
KPNB1 karyopherin (importin) beta 1 0.0225487
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0225332
KRT8 keratin 8, type II 0.0225087
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0224527
TPM3 tropomyosin 3 0.0222202
HMGN2 high mobility group nucleosomal binding domain 2 0.0220828
COL1A2 collagen, type I, alpha 2 0.0216735
SFTPA2 surfactant protein A2 0.0215462
RPLP0 ribosomal protein, large, P0 0.0212134
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.02097
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0209025
AHNAK AHNAK nucleoprotein 0.0204586
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0204193
RPS2 ribosomal protein S2 0.0202761
PLEC plectin 0.0200488
DST dystonin 0.0199699
SERBP1 SERPINE1 mRNA binding protein 1 0.0198608
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0198032
RPL26 ribosomal protein L26 0.0197715
CAPN2 calpain 2, (m/II) large subunit 0.0197415
CALU calumenin 0.019707
GREM1 gremlin 1, DAN family BMP antagonist 0.0195134
FSTL1 follistatin-like 1 0.0193534
CAVIN1 caveolae associated protein 1 0.0193263
RBM3 RNA binding motif (RNP1, RRM) protein 3 0.0185916
TUBA1B tubulin, alpha 1b 0.0185441
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0185173
VCAN versican 0.0185097
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0183542
ALCAM activated leukocyte cell adhesion molecule 0.0183216
HMGA2 high mobility group AT-hook 2 0.0178086
CNN3 calponin 3, acidic 0.0178079
ACSL4 acyl-CoA synthetase long-chain family member 4 0.0177804
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0172091
LAMP2 lysosomal-associated membrane protein 2 0.0171074
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.01692
RPL5 ribosomal protein L5 0.0168551
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0166766
CTSB cathepsin B 0.0166531
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0166459
ASPH aspartate beta-hydroxylase 0.0163109

decreased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor -0.0752521
FNDC3B fibronectin type III domain containing 3B -0.0729377
SOD2 superoxide dismutase 2, mitochondrial -0.0721817
PDE10A phosphodiesterase 10A -0.0518071
ZNF292 zinc finger protein 292 -0.0513606
CADM1 cell adhesion molecule 1 -0.0479738
NDRG1 N-myc downstream regulated 1 -0.0448815
UGCG UDP-glucose ceramide glucosyltransferase -0.043384
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0405748
NAV2 neuron navigator 2 -0.0362046
ELL2 elongation factor, RNA polymerase II, 2 -0.0346173
ZFAND3 zinc finger, AN1-type domain 3 -0.0340928
TSC22D2 TSC22 domain family, member 2 -0.0337583
VEGFA vascular endothelial growth factor A -0.033667
FRMD4A FERM domain containing 4A -0.0325463
SPAG9 sperm associated antigen 9 -0.0320078
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0319541
JMJD1C jumonji domain containing 1C -0.031559
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0307353
TENT5A terminal nucleotidyltransferase 5A -0.0290318
ADM adrenomedullin -0.0280069
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0276942
KMT2E lysine (K)-specific methyltransferase 2E -0.027678
HELZ helicase with zinc finger -0.0274053
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0268926
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0266438
QKI QKI, KH domain containing, RNA binding -0.0261077
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0256943
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0250898
WTAP Wilms tumor 1 associated protein -0.0249102
NAMPT nicotinamide phosphoribosyltransferase -0.0248189
ATXN1 ataxin 1 -0.0247974
WSB1 WD repeat and SOCS box containing 1 -0.0241692
SETD5 SET domain containing 5 -0.024086
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.023938
TNS3 tensin 3 -0.0238745
ATP13A3 ATPase type 13A3 -0.0237735
RBM39 RNA binding motif protein 39 -0.0236255
DLG1 discs, large homolog 1 (Drosophila) -0.0231622
SMAD3 SMAD family member 3 -0.0229713
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0228756
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0227628
OGA O-GlcNAcase -0.0224884
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0221224
CCNL1 cyclin L1 -0.0221181
SDK1 sidekick cell adhesion molecule 1 -0.0215574
GOLGA4 golgin A4 -0.0213192
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0212643
HDAC9 histone deacetylase 9 -0.0212489
RAB7A RAB7A, member RAS oncogene family -0.0212101
FNIP1 folliculin interacting protein 1 -0.0210315
FOXO3 forkhead box O3 -0.0209664
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0207922
IER3 immediate early response 3 -0.0199198
RB1CC1 RB1-inducible coiled-coil 1 -0.0198731
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0197717
EXT1 exostosin glycosyltransferase 1 -0.0189108
AFF4 AF4/FMR2 family, member 4 -0.018759
MXI1 MAX interactor 1, dimerization protein -0.0187034
SBF2 SET binding factor 2 -0.0185948
USP9X ubiquitin specific peptidase 9, X-linked -0.018579
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0184094
PHF21A PHD finger protein 21A -0.0182596
KIF13A kinesin family member 13A -0.0181676
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0180925
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0178805
ICAM1 intercellular adhesion molecule 1 -0.0176828
FMNL2 formin-like 2 -0.0176779
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0176132
PPARD peroxisome proliferator-activated receptor delta -0.0174632
TXNIP thioredoxin interacting protein -0.0174156
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0170047
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0169884
KDM2A lysine (K)-specific demethylase 2A -0.0168787
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.01661
RLF rearranged L-myc fusion -0.0165907
WAC WW domain containing adaptor with coiled-coil -0.0165088
SLC38A2 solute carrier family 38, member 2 -0.0161968
ASXL1 additional sex combs like transcriptional regulator 1 -0.0160919
PHIP pleckstrin homology domain interacting protein -0.0160833
LCORL ligand dependent nuclear receptor corepressor-like -0.0160719
NT5C2 5'-nucleotidase, cytosolic II -0.0160296
KLF6 Kruppel-like factor 6 -0.0160151
ARRDC3 arrestin domain containing 3 -0.0160104
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0159952
TNIP1 TNFAIP3 interacting protein 1 -0.0159905
TRA2A transformer 2 alpha homolog (Drosophila) -0.0159826
ZNF207 zinc finger protein 207 -0.0159781
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.01587
KDM6A lysine (K)-specific demethylase 6A -0.015648
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0156231
ERBIN erbb2 interacting protein -0.0155861
KDM3A lysine (K)-specific demethylase 3A -0.0152307
FRMPD4 FERM and PDZ domain containing 4 -0.0150008
MYOF myoferlin -0.014946
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0148345
UBC ubiquitin C -0.0148249
TAPBP TAP binding protein (tapasin) -0.0147904
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0146977
UBE2H ubiquitin-conjugating enzyme E2H -0.0145076