Docetaxel (Trihydrate)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel (Trihydrate) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel (Trihydrate)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0915682
TXNRD1 thioredoxin reductase 1 0.0832811
EEF2 eukaryotic translation elongation factor 2 0.0665965
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0538111
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0466357
CENPF centromere protein F, 350/400kDa 0.045047
POTEF POTE ankyrin domain family, member F 0.044909
NUP58 nucleoporin 58 0.0412215
GARS1 glycyl-tRNA synthetase 1 0.0370999
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0366759
RTN4 reticulon 4 0.0351917
KMT2E lysine (K)-specific methyltransferase 2E 0.0346822
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0335375
PCBP2 poly(rC) binding protein 2 0.0323493
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0323093
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.030845
MKI67 marker of proliferation Ki-67 0.0302435
YBX1 Y box binding protein 1 0.0293846
MATR3 matrin 3 0.0284406
KMT2C lysine (K)-specific methyltransferase 2C 0.0280365
QKI QKI, KH domain containing, RNA binding 0.0271654
ADAM17 ADAM metallopeptidase domain 17 0.0268258
PTBP2 polypyrimidine tract binding protein 2 0.0262273
NCKAP1 NCK-associated protein 1 0.0261762
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.025969
FOSL1 FOS-like antigen 1 0.025761
ZFAND3 zinc finger, AN1-type domain 3 0.0252275
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.024769
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0241584
FXR1 fragile X mental retardation, autosomal homolog 1 0.0240301
RLF rearranged L-myc fusion 0.0239742
TPM3 tropomyosin 3 0.0237171
ADAM9 ADAM metallopeptidase domain 9 0.0236649
RPL3 ribosomal protein L3 0.0230324
SPAG9 sperm associated antigen 9 0.0229333
SFPQ splicing factor proline/glutamine-rich 0.0228962
CKAP5 cytoskeleton associated protein 5 0.0226852
TPX2 TPX2, microtubule-associated 0.0223608
RNF145 ring finger protein 145 0.022338
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0218922
FOXJ3 forkhead box J3 0.0218425
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0218316
MSN moesin 0.0216946
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0214549
NEK7 NIMA-related kinase 7 0.020804
ZNF292 zinc finger protein 292 0.0206801
GPBP1L1 GC-rich promoter binding protein 1-like 1 0.0205996
SNX3 sorting nexin 3 0.0205952
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.02051
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0204521
CCNL1 cyclin L1 0.0202415
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.020174
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0201087
FTL ferritin, light polypeptide 0.0200493
PUM2 pumilio RNA-binding family member 2 0.0199684
ECPAS Ecm29 proteasome adaptor and scaffold 0.0197412
XPO1 exportin 1 0.019688
BCLAF1 BCL2-associated transcription factor 1 0.0196809
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0196724
JMJD1C jumonji domain containing 1C 0.0195247
SRPK2 SRSF protein kinase 2 0.0195199
ARRDC3 arrestin domain containing 3 0.0194962
FUBP1 far upstream element (FUSE) binding protein 1 0.0194021
KDM2A lysine (K)-specific demethylase 2A 0.0193306
UBA6 ubiquitin-like modifier activating enzyme 6 0.0193288
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0193243
RAB6A RAB6A, member RAS oncogene family 0.0193055
TRA2B transformer 2 beta homolog (Drosophila) 0.01914
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0191235
TNPO1 transportin 1 0.0190012
NBAS neuroblastoma amplified sequence 0.0189124
ECT2 epithelial cell transforming 2 0.0188787
MTF2 metal response element binding transcription factor 2 0.0188205
PRPF8 pre-mRNA processing factor 8 0.0188049
HOOK2 hook microtubule-tethering protein 2 0.018682
STRN3 striatin, calmodulin binding protein 3 0.0185472
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0185136
KIF5B kinesin family member 5B 0.0184547
TFG TRK-fused gene 0.0184232
USP24 ubiquitin specific peptidase 24 0.0184063
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0183099
TCEA1 transcription elongation factor A (SII), 1 0.0182659
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0182558
GOLGA4 golgin A4 0.0182259
UBC ubiquitin C 0.0181497
MEMO1 mediator of cell motility 1 0.017514
USP3 ubiquitin specific peptidase 3 0.0174677
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0174183
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0173953
CSDE1 cold shock domain containing E1, RNA-binding 0.017312
SMC4 structural maintenance of chromosomes 4 0.0172955
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0171842
CENPE centromere protein E, 312kDa 0.0171826
CEP170 centrosomal protein 170kDa 0.0169262
DIAPH3 diaphanous-related formin 3 0.0169144
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0168289
EIF5 eukaryotic translation initiation factor 5 0.0168283
ATP13A3 ATPase type 13A3 0.0168245
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0167374
TFRC transferrin receptor 0.0167144

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.212081
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.182913
CD44 CD44 molecule (Indian blood group) -0.172284
PSD3 pleckstrin and Sec7 domain containing 3 -0.158099
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.121524
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.119915
HLA-B major histocompatibility complex, class I, B -0.119346
DST dystonin -0.116382
CADM2 cell adhesion molecule 2 -0.115309
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.113935
MT2A metallothionein 2A -0.104178
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0940738
VIM vimentin -0.0873025
EHBP1 EH domain binding protein 1 -0.086117
TM4SF1 transmembrane 4 L six family member 1 -0.0757896
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0742687
VCL vinculin -0.0737845
TPT1 tumor protein, translationally-controlled 1 -0.0723941
WARS1 tryptophanyl-tRNA synthetase 1 -0.0688429
ARHGAP5 Rho GTPase activating protein 5 -0.0687589
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0666102
TNS3 tensin 3 -0.0651528
EPHA4 EPH receptor A4 -0.0640107
IFIH1 interferon induced with helicase C domain 1 -0.0615202
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0592471
RIGI RNA sensor RIG-I -0.058774
DPYD dihydropyrimidine dehydrogenase -0.0584743
TSC22D1 TSC22 domain family, member 1 -0.0584324
EFNA5 ephrin-A5 -0.0571375
PTMA prothymosin, alpha -0.057034
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0557799
SP100 SP100 nuclear antigen -0.0526424
RNF213 ring finger protein 213 -0.052486
CSMD3 CUB and Sushi multiple domains 3 -0.0521269
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0520069
RPL35A ribosomal protein L35a -0.0512517
CAPRIN2 caprin family member 2 -0.0501701
PDE10A phosphodiesterase 10A -0.0498173
NPAS2 neuronal PAS domain protein 2 -0.0448337
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0425989
RAD51B RAD51 paralog B -0.0422535
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0421181
PLSCR1 phospholipid scramblase 1 -0.0420175
WWTR1 WW domain containing transcription regulator 1 -0.0417294
TMSB4X thymosin beta 4, X-linked -0.039748
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.039628
SDK1 sidekick cell adhesion molecule 1 -0.0393225
BCAR3 breast cancer anti-estrogen resistance 3 -0.0378103
DENND1A DENN/MADD domain containing 1A -0.0377193
IFI6 interferon, alpha-inducible protein 6 -0.0376229
DNER delta/notch-like EGF repeat containing -0.0376203
PRELID2 PRELI domain containing 2 -0.0375795
CFLAR CASP8 and FADD-like apoptosis regulator -0.0372917
RUNX1 runt-related transcription factor 1 -0.0368562
BICD1 bicaudal D homolog 1 (Drosophila) -0.0362873
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0361298
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0360457
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0358717
MYOF myoferlin -0.0354358
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0343803
EXOC4 exocyst complex component 4 -0.0335804
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.033384
RPL26 ribosomal protein L26 -0.0332453
LPP LIM domain containing preferred translocation partner in lipoma -0.0332243
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0327975
ZNF217 zinc finger protein 217 -0.0326125
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0322863
DLG1 discs, large homolog 1 (Drosophila) -0.0320507
NT5E 5'-nucleotidase, ecto (CD73) -0.0319258
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0317455
TMSB10 thymosin beta 10 -0.0306636
PMP22 peripheral myelin protein 22 -0.0302917
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0295915
AEBP2 AE binding protein 2 -0.0294763
MACF1 microtubule-actin crosslinking factor 1 -0.0294728
FBXO11 F-box protein 11 -0.0293682
STK17A serine/threonine kinase 17a -0.0292493
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0292359
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0290285
SMYD3 SET and MYND domain containing 3 -0.0284664
INTS6 integrator complex subunit 6 -0.0284209
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0283079
ZBTB38 zinc finger and BTB domain containing 38 -0.0278807
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0277682
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0277674
MT1E metallothionein 1E -0.0275602
RPLP1 ribosomal protein, large, P1 -0.0273558
NEK10 NIMA-related kinase 10 -0.0273328
TRIM56 tripartite motif containing 56 -0.0271477
TGM2 transglutaminase 2 -0.0271104
HDAC9 histone deacetylase 9 -0.0270299
AHNAK AHNAK nucleoprotein -0.0269215
RPS8 ribosomal protein S8 -0.0268105
LOXL2 lysyl oxidase-like 2 -0.0267067
CAVIN1 caveolae associated protein 1 -0.0265579
IFITM1 interferon induced transmembrane protein 1 -0.0264133
RPS24 ribosomal protein S24 -0.0263251
KPNB1 karyopherin (importin) beta 1 -0.0261787
LDHA lactate dehydrogenase A -0.0261314
SQSTM1 sequestosome 1 -0.0259706